PMC Links for GEO Profiles (Select 44243842) - PMC

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Items: 15

Select item 76134041.

MNK2 deficiency potentiates β-cell regeneration via translational regulation

Christos Karampelias, Kathleen Watt, Charlotte L. Mattsson, Ángel Fernández Ruiz, Habib Rezanejad, Jiarui Mi, Xiaojing Liu, Lianhe Chu, Jason W. Locasale, Gregory S. Korbutt, Meritxell Rovira, Ola Larsson, Olov Andersson

Nat Chem Biol. 2022; 18(9): 942–953. Published online 2022 Jun 13. doi: 10.1038/s41589-022-01047-x

PMCID:: PMC7613404

Abstract Article PDF–12M

Select item 71381662.

Investigation of the role of VHL-HIF signaling in DNA repair and apoptosis in zebrafish

Hyejeong Rosemary Kim, Kirankumar Santhakumar, Eleanor Markham, Davide Baldera, David Greenald, Helen E. Bryant, Sherif F. El-Khamisy, Fredericus J. van Eeden

Oncotarget. 2020 Mar 31; 11(13): 1109–1130. Published online 2020 Mar 31. doi: 10.18632/oncotarget.27521

PMCID:: PMC7138166

Abstract Article PDF–6.7M

Select item 70063993.

RNA-Seq reveals differential expression profiles and functional annotation of genes involved in retinal degeneration in Pde6c mutant Danio rerio

Madhu Sudhana Saddala, Anton Lennikov, Adam Bouras, Hu Huang

BMC Genomics. 2020; 21: 132. Published online 2020 Feb 7. doi: 10.1186/s12864-020-6550-z

PMCID:: PMC7006399

Abstract Article PDF–2.2M

Select item 54433044.

The Transcriptome of the Zebrafish Embryo After Chemical Exposure: A Meta-Analysis

Andreas Schüttler, Kristin Reiche, Rolf Altenburger, Wibke Busch

Toxicol Sci. 2017 Jun; 157(2): 291–304. Published online 2017 Feb 27. doi: 10.1093/toxsci/kfx045

PMCID:: PMC5443304

Abstract Article PDF–785K

Select item 54230945.

RESA identifies mRNA regulatory sequences with high resolution

Valeria Yartseva, Carter M. Takacs, Charles E. Vejnar, Miler T. Lee, Antonio J. Giraldez

Nat Methods. Author manuscript; available in PMC 2017 Jun 26.

Published in final edited form as: Nat Methods. 2017 Feb; 14(2): 201–207. Published online 2016 Dec 26. doi: 10.1038/nmeth.4121

PMCID:: PMC5423094

Abstract Article PDF–1.3M

Select item 53397436.

Dual Functional Roles of Molecular Beacon as a MicroRNA Detector and Inhibitor

Wai Ming Li, Ching-Man Chan, Andrew L. Miller, Chow H. Lee

J Biol Chem. 2017 Mar 3; 292(9): 3568–3580. Published online 2017 Jan 18. doi: 10.1074/jbc.M116.765776

PMCID:: PMC5339743

Abstract Article PDF–5.7M

Select item 50234947.

Phenotypically anchored transcriptome profiling of developmental exposure to the antimicrobial agent, triclosan, reveals hepatotoxicity in embryonic zebrafish

Derik E. Haggard, Pamela D. Noyes, Katrina M. Waters, Robert L. Tanguay

Toxicol Appl Pharmacol. Author manuscript; available in PMC 2017 Oct 1.

Published in final edited form as: Toxicol Appl Pharmacol. 2016 Oct 1; 308: 32–45. Published online 2016 Aug 15. doi: 10.1016/j.taap.2016.08.013

PMCID:: PMC5023494

Abstract Article PDF–1.8M

Select item 48707328.

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database

Jeremy Pasquier, Cédric Cabau, Thaovi Nguyen, Elodie Jouanno, Dany Severac, Ingo Braasch, Laurent Journot, Pierre Pontarotti, Christophe Klopp, John H. Postlethwait, Yann Guiguen, Julien Bobe

BMC Genomics. 2016; 17: 368. Published online 2016 May 18. doi: 10.1186/s12864-016-2709-z

PMCID:: PMC4870732

Abstract Article PDF–1.8M

Select item 46426299.

Genome-wide mapping of Hif-1α binding sites in zebrafish

David Greenald, Justin Jeyakani, Bernd Pelster, Ian Sealy, Sinnakaruppan Mathavan, Fredericus J. van Eeden

BMC Genomics. 2015; 16: 923. Published online 2015 Nov 11. doi: 10.1186/s12864-015-2169-x

PMCID:: PMC4642629

Abstract Article PDF–1.1M

Select item 463413710.

RFX transcription factors are essential for hearing in mice

Ran Elkon, Beatrice Milon, Laura Morrison, Manan Shah, Sarath Vijayakumar, Manoj Racherla, Carmen C. Leitch, Lorna Silipino, Shadan Hadi, Michèle Weiss-Gayet, Emmanuèle Barras, Christoph D. Schmid, Aouatef Ait-Lounis, Ashley Barnes, Yang Song, David J. Eisenman, Efrat Eliyahu, Gregory I. Frolenkov, Scott E. Strome, Bénédicte Durand, Norann A. Zaghloul, Sherri M. Jones, Walter Reith, Ronna Hertzano

Nat Commun. 2015; 6: 8549. Published online 2015 Oct 15. doi: 10.1038/ncomms9549

PMCID:: PMC4634137

Abstract Article PDF–5.5M

Select item 367791611.

Liver Transcriptome Changes in Zebrafish during Acclimation to Transport-Associated Stress

Anusha K. S. Dhanasiri, Jorge M. O. Fernandes, Viswanath Kiron

PLoS One. 2013; 8(6): e65028. Published online 2013 Jun 10. doi: 10.1371/journal.pone.0065028

PMCID:: PMC3677916

Abstract Article PDF–1.1M

Select item 317805912.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 119954613.

The zebrafish gene map defines ancestral vertebrate chromosomes

Ian G. Woods, Catherine Wilson, Brian Friedlander, Patricia Chang, Daengnoy K. Reyes, Rebecca Nix, Peter D. Kelly, Felicia Chu, John H. Postlethwait, William S. Talbot

Genome Res. 2005 Sep; 15(9): 1307–1314. doi: 10.1101/gr.4134305