PMC Links for GEO Profiles (Select 44233110) - PMC

Select item 85289311.

Genetic landscape of T cells identifies synthetic lethality for T-ALL

Connor P. O’Meara, Lucia Guerri, Divine-Fondzenyuy Lawir, Fernando Mateos, Mary Iconomou, Norimasa Iwanami, Cristian Soza-Ried, Katarzyna Sikora, Iliana Siamishi, Orlando Giorgetti, Sarah Peter, Michael Schorpp, Thomas Boehm

Commun Biol. 2021; 4: 1201. Published online 2021 Oct 20. doi: 10.1038/s42003-021-02694-x

Correction in:: Commun Biol. 2024; 7: 182.

PMCID:: PMC8528931

Abstract Article PDF–3.2M

Select item 83201832.

Evolution of hes gene family in vertebrates: the hes5 cluster genes have specifically increased in frogs

Aya Kuretani, Takayoshi Yamamoto, Masanori Taira, Tatsuo Michiue

BMC Ecol Evol. 2021; 21: 147. Published online 2021 Jul 29. doi: 10.1186/s12862-021-01879-6

PMCID:: PMC8320183

Abstract Article PDF–4.8M

Select item 53379743.

Evolution of complexity in the zebrafish synapse proteome

Àlex Bayés, Mark O. Collins, Rita Reig-Viader, Gemma Gou, David Goulding, Abril Izquierdo, Jyoti S. Choudhary, Richard D. Emes, Seth G. N. Grant

Nat Commun. 2017; 8: 14613. Published online 2017 Mar 2. doi: 10.1038/ncomms14613

PMCID:: PMC5337974

Abstract Article PDF–2.0M

Select item 48763714.

Embryo Microinjection of Selenomethionine Reduces Hatchability and Modifies Oxidant Responsive Gene Expression in Zebrafish

J. K. Thomas, D. M. Janz

Sci Rep. 2016; 6: 26520. Published online 2016 May 23. doi: 10.1038/srep26520

PMCID:: PMC4876371

Abstract Article PDF–1005K

Select item 48707325.

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database

Jeremy Pasquier, Cédric Cabau, Thaovi Nguyen, Elodie Jouanno, Dany Severac, Ingo Braasch, Laurent Journot, Pierre Pontarotti, Christophe Klopp, John H. Postlethwait, Yann Guiguen, Julien Bobe

BMC Genomics. 2016; 17: 368. Published online 2016 May 18. doi: 10.1186/s12864-016-2709-z

PMCID:: PMC4870732

Abstract Article PDF–1.8M

Select item 46341376.

RFX transcription factors are essential for hearing in mice

Ran Elkon, Beatrice Milon, Laura Morrison, Manan Shah, Sarath Vijayakumar, Manoj Racherla, Carmen C. Leitch, Lorna Silipino, Shadan Hadi, Michèle Weiss-Gayet, Emmanuèle Barras, Christoph D. Schmid, Aouatef Ait-Lounis, Ashley Barnes, Yang Song, David J. Eisenman, Efrat Eliyahu, Gregory I. Frolenkov, Scott E. Strome, Bénédicte Durand, Norann A. Zaghloul, Sherri M. Jones, Walter Reith, Ronna Hertzano

Nat Commun. 2015; 6: 8549. Published online 2015 Oct 15. doi: 10.1038/ncomms9549

PMCID:: PMC4634137

Abstract Article PDF–5.5M

Select item 44559287.

Partial depletion of yolk during zebrafish embryogenesis changes the dynamics of methionine cycle and metabolic genes

Yunxian Huang, Sam E.V. Linsen

BMC Genomics. 2015; 16(1): 427. Published online 2015 Jun 4. doi: 10.1186/s12864-015-1654-6

PMCID:: PMC4455928

Abstract Article PDF–1.5M

Select item 42896828.

MAT2A Mutations Predispose Individuals to Thoracic Aortic Aneurysms

Dong-chuan Guo, Limin Gong, Ellen S. Regalado, Regie L. Santos-Cortez, Ren Zhao, Bo Cai, Sudha Veeraraghavan, Siddharth K. Prakash, Ralph J. Johnson, Ann Muilenburg, Marcia Willing, Guillaume Jondeau, Catherine Boileau, Hariyadarshi Pannu, Rocio Moran, Julie Debacker, GenTAC Investigators, National Heart, Lung, and Blood Institute Go Exome Sequencing Project, Montalcino Aortic Consortium, Michael J. Bamshad, Jay Shendure, Deborah A. Nickerson, Suzanne M. Leal, C.S. Raman, Eric C. Swindell, Dianna M. Milewicz

Am J Hum Genet. 2015 Jan 8; 96(1): 170–177. doi: 10.1016/j.ajhg.2014.11.015

PMCID:: PMC4289682

Abstract Article PDF–1.5M

Select item 39861659.

Gene-expression analysis of hair cell regeneration in the zebrafish lateral line

Linjia Jiang, Andres Romero-Carvajal, Jeff S. Haug, Christopher W. Seidel, Tatjana Piotrowski

Proc Natl Acad Sci U S A. 2014 Apr 8; 111(14): E1383–E1392. Published online 2014 Mar 27. doi: 10.1073/pnas.1402898111

Correction in:: Proc Natl Acad Sci U S A. 2015 Nov 3; 112(44): E6080.

PMCID:: PMC3986165

Abstract Article PDF–1.3M

Select item 360335210.

Trapping Cardiac Recessive Mutants via Expression-based Insertional Mutagenesis Screening

Yonghe Ding, Weibin Liu, Yun Deng, Beninio Jomok, Jingchun Yang, Wei Huang, Karl J. Clark, Tao P. Zhong, Xueying Lin, Stephen C. Ekker, Xiaolei Xu

Circ Res. Author manuscript; available in PMC 2014 Feb 15.

Published in final edited form as: Circ Res. 2013 Feb 15; 112(4): 606–617. Published online 2013 Jan 2. doi: 10.1161/CIRCRESAHA.112.300603

PMCID:: PMC3603352

Abstract Article PDF–3.3M

Select item 341075611.

Disruption of the folate pathway in zebrafish causes developmental defects

Marina S Lee, Jenna R Bonner, David J Bernard, Erica L Sanchez, Eric T Sause, R Reid Prentice, Shawn M Burgess, Lawrence C Brody

BMC Dev Biol. 2012; 12: 12. Published online 2012 Apr 5. doi: 10.1186/1471-213X-12-12

PMCID:: PMC3410756

Abstract Article PDF–5.4M

Select item 317805912.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 119954613.

The zebrafish gene map defines ancestral vertebrate chromosomes

Ian G. Woods, Catherine Wilson, Brian Friedlander, Patricia Chang, Daengnoy K. Reyes, Rebecca Nix, Peter D. Kelly, Felicia Chu, John H. Postlethwait, William S. Talbot

Genome Res. 2005 Sep; 15(9): 1307–1314. doi: 10.1101/gr.4134305

PMCID:: PMC1199546

Abstract Article PDF–595K

Select item 52895914.

Hematopoietic gene expression profile in zebrafish kidney marrow

Huai-Dong Song, Xiao-Jian Sun, Min Deng, Guo-Wei Zhang, Yi Zhou, Xin-Yan Wu, Yan Sheng, Yi Chen, Zheng Ruan, Chun-Lei Jiang, Hui-Yong Fan, Leonard I. Zon, John P. Kanki, Ting Xi Liu, A. Thomas Look, Zhu Chen

Proc Natl Acad Sci U S A. 2004 Nov 16; 101(46): 16240–16245. Published online 2004 Nov 1. doi: 10.1073/pnas.0407241101

PMCID:: PMC528959

Abstract Article PDF–551K

Select item 43029015.

15,000 Unique Zebrafish EST Clusters and Their Future Use in Microarray for Profiling Gene Expression Patterns During Embryogenesis

Jane Lo, Sorcheng Lee, Min Xu, Feng Liu, Hua Ruan, Alvin Eun, Yawen He, Weiping Ma, Weefuen Wang, Zilong Wen, Jinrong Peng

Genome Res. 2003 Mar 1; 13(3): 455–466. doi: 10.1101/gr.885403

PMCID:: PMC430290

Abstract Article PDF–981K

Select item 31307016.

A Comparative Map of the Zebrafish Genome

Ian G. Woods, Peter D. Kelly, Felicia Chu, Phuong Ngo-Hazelett, Yi-Lin Yan, Hui Huang, John H. Postlethwait, William S. Talbot

Genome Res. 2000 Dec; 10(12): 1903–1914. doi: 10.1101/gr.10.12.1903

PMCID:: PMC313070

Abstract Article PDF–10M

Select item 13924117.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

Mammalian Gene Collection (MGC) Program Team

Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899

PMCID:: PMC139241

Abstract Article PDF–118K

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