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Items: 1 to 20 of 25

1.
Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development
Francesco Bedogni, Robert F. Hevner
Front Mol Neurosci. 2021; 14: 686034. Published online 2021 Jul 12. doi: 10.3389/fnmol.2021.686034
PMCID:
PMC8313239
AbstractArticlePDF–1.6M
2.
Derepression of sonic hedgehog signaling upon Gpr161 deletion unravels forebrain and ventricular abnormalities
Issei S. Shimada, Bandarigoda N. Somatilaka, Sun-Hee Hwang, Ashley G. Anderson, John M. Shelton, Veena Rajaram, Genevieve Konopka, Saikat Mukhopadhyay
Dev Biol. Author manuscript; available in PMC 2020 Jun 1.
Published in final edited form as: Dev Biol. 2019 Jun 1; 450(1): 47–62. Published online 2019 Mar 23. doi: 10.1016/j.ydbio.2019.03.011
PMCID:
PMC6497453
AbstractArticlePDF–5.3M
3.
Conditional ablation of the RFX4 isoform 1 transcription factor: Allele dosage effects on brain phenotype
Ping Xu, James P. Morrison, Julie F. Foley, Deborah J. Stumpo, Toni Ward, Darryl C. Zeldin, Perry J. Blackshear
PLoS One. 2018; 13(1): e0190561. Published online 2018 Jan 3. doi: 10.1371/journal.pone.0190561
PMCID:
PMC5752003
AbstractArticlePDF–16M
4.
Fancd2 in vivo interaction network reveals a non-canonical role in mitochondrial function
Tingting Zhang, Wei Du, Andrew F. Wilson, Satoshi H. Namekawa, Paul R. Andreassen, Amom Ruhikanta Meetei, Qishen Pang
Sci Rep. 2017; 7: 45626. Published online 2017 Apr 5. doi: 10.1038/srep45626
PMCID:
PMC5381226
AbstractArticlePDF–1.4M
5.
Evolutionarily Dynamic Alternative Splicing of GPR56 Regulates Regional Cerebral Cortical Patterning
Byoung-Il Bae, Ian Tietjen, Kutay D. Atabay, Gilad D. Evrony, Matthew B. Johnson, Ebenezer Asare, Peter P. Wang, Ayako Y. Murayama, Kiho Im, Steven N. Lisgo, Lynne Overman, Nenad Šestan, Bernard S. Chang, A. James Barkovich, P. Ellen Grant, Meral Topçu, Jeffrey Politsky, Hideyuki Okano, Xianhua Piao, Christopher A. Walsh
Science. Author manuscript; available in PMC 2015 Jun 25.
Published in final edited form as: Science. 2014 Feb 14; 343(6172): 764–768. doi: 10.1126/science.1244392
PMCID:
PMC4480613
AbstractArticlePDF–1.6M
6.
A conditional knockout resource for the genome–wide study of mouse gene function
William C. Skarnes, Barry Rosen, Anthony P. West, Manousos Koutsourakis, Wendy Bushell, Vivek Iyer, Alejandro O. Mujica, Mark Thomas, Jennifer Harrow, Tony Cox, David Jackson, Jessica Severin, Patrick Biggs, Jun Fu, Michael Nefedov, Pieter J. de Jong, A. Francis Stewart, Allan Bradley
Nature. Author manuscript; available in PMC 2013 Feb 14.
Published in final edited form as: Nature. 2011 Jun 15; 474(7351): 337–342. Published online 2011 Jun 15. doi: 10.1038/nature10163
PMCID:
PMC3572410
AbstractArticlePDF–1.1M
7.
Detection of Genes Regulated by Lmx1b During Limb Dorsalization
Jennifer M. Feenstra, Kohei Kanaya, Charmaine U Pira, Sarah E. Hoffman, Richard J. Eppey, Kerby C. Oberg
Dev Growth Differ. Author manuscript; available in PMC 2013 May 1.
Published in final edited form as: Dev Growth Differ. 2012 May; 54(4): 451–462. Published online 2012 Mar 15. doi: 10.1111/j.1440-169X.2012.01331.x
PMCID:
PMC3546822
AbstractArticlePDF–3.2M
8.
Transcriptional Analysis of Gli3 Mutants Identifies Wnt Target Genes in the Developing Hippocampus
Kerstin Hasenpusch-Theil, Dario Magnani, Eleni-Maria Amaniti, Lin Han, Douglas Armstrong, Thomas Theil
Cereb Cortex. 2012 Dec; 22(12): 2878–2893. Published online 2012 Jan 10. doi: 10.1093/cercor/bhr365
PMCID:
PMC3491769
AbstractArticlePDF–5.1M
9.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
10.
Deterministic and Stochastic Allele Specific Gene Expression in Single Mouse Blastomeres
Fuchou Tang, Catalin Barbacioru, Ellen Nordman, Siqin Bao, Caroline Lee, Xiaohui Wang, Brian B. Tuch, Edith Heard, Kaiqin Lao, M. Azim Surani
PLoS One. 2011; 6(6): e21208. Published online 2011 Jun 23. doi: 10.1371/journal.pone.0021208
PMCID:
PMC3121735
AbstractArticlePDF–1.0M
11.
A Systems Approach Reveals that the Myogenesis Genome Network Is Regulated by the Transcriptional Repressor RP58
Shigetoshi Yokoyama, Yoshiaki Ito, Hiroe Ueno-Kudoh, Hirohito Shimizu, Kenta Uchibe, Sonia Albini, Kazuhiko Mitsuoka, Shigeru Miyaki, Minako Kiso, Akane Nagai, Tomohiro Hikata, Tadahiro Osada, Noritsugu Fukuda, Satoshi Yamashita, Daisuke Harada, Valeria Mezzano, Masataka Kasai, Pier Lorenzo Puri, Yoshihide Hayashizaki, Haruo Okado, Megumi Hashimoto, Hiroshi Asahara
Dev Cell. Author manuscript; available in PMC 2011 Jun 7.
Published in final edited form as: Dev Cell. 2009 Dec; 17(6): 836–848. doi: 10.1016/j.devcel.2009.10.011
PMCID:
PMC3110151
AbstractArticlePDF–2.0M
12.
A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo
Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio
PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582
PMCID:
PMC3022534
AbstractArticlePDF–3.8M
13.
Rfx6 Directs Islet Formation and Insulin Production in Mice and Humans
Stuart B. Smith, Hui-Qi Qu, Nadine Taleb, Nina Kishimoto, David W. Scheel, Yang Lu, Ann-Marie Patch, Rosemary Grabs, Juehu Wang, Francis C. Lynn, Takeshi Miyatsuka, John Mitchell, Rina Seerke, Julie Désir, Serge Vanden Eijnden, Marc Abramowicz, Nadine Kacet, Jacques Weill, Marie-Éve Renard, Mattia Gentile, Inger Hansen, Ken Dewar, Andrew T. Hattersley, Rennian Wang, Maria E. Wilson, Jeffrey D. Johnson, Constantin Polychronakos, Michael S. German
Nature. Author manuscript; available in PMC 2010 Aug 11.
Published in final edited form as: Nature. 2010 Feb 11; 463(7282): 775–780. doi: 10.1038/nature08748
PMCID:
PMC2896718
AbstractArticlePDF–933K
14.
An atlas of combinatorial transcriptional regulation in mouse and man
The FANTOM consortium and RIKEN Omics Science Center
Cell. Author manuscript; available in PMC 2011 Mar 5.
Published in final edited form as: Cell. 2010 Mar 5; 140(5): 744–752. doi: 10.1016/j.cell.2010.01.044
Correction in:
volume 141 on page 369
PMCID:
PMC2836267
AbstractArticlePDF–2.2M
15.
Brn3a and Nurr1 Mediate a Gene Regulatory Pathway for Habenula Development
Lely A. Quina, Shirong Wang, Lydia Ng, Eric E. Turner
J Neurosci. 2009 Nov 11; 29(45): 14309–14322. doi: 10.1523/JNEUROSCI.2430-09.2009
PMCID:
PMC2802832
AbstractArticlePDF–27M
16.
A Genome-Wide Screen for Spatially Restricted Expression Patterns Identifies Transcription Factors That Regulate Glial Development
Hui Fu, Jun Cai, Hans Clevers, Eva Fast, Susan Gray, Rachel Greenberg, Mukesh K. Jain, Qiufu Ma, Mengsheng Qiu, David H. Rowitch, Christopher M. Taylor, Charles D. Stiles
J Neurosci. 2009 Sep 9; 29(36): 11399–11408. doi: 10.1523/JNEUROSCI.0160-09.2009
PMCID:
PMC2775518
AbstractArticlePDF–2.5M
17.
Differential expression of Rfx1–4 during mouse spermatogenesis
W. Stephen Kistler, Gary C. Horvath, Anindya Dasgupta, Malathi K. Kistler
Gene Expr Patterns. Author manuscript; available in PMC 2010 Oct 1.
Published in final edited form as: Gene Expr Patterns. 2009 Oct; 9(7): 515–519. Published online 2009 Jul 19. doi: 10.1016/j.gep.2009.07.004
PMCID:
PMC2761754
AbstractArticlePDF–274K
18.
Large-scale gene trapping in C57BL/6N mouse embryonic stem cells
Gwenn M. Hansen, Diane C. Markesich, Michael B. Burnett, Qichao Zhu, Karen M. Dionne, Lizabeth J. Richter, Richard H. Finnell, Arthur T. Sands, Brian P. Zambrowicz, Alejandro Abuin
Genome Res. 2008 Oct; 18(10): 1670–1679. doi: 10.1101/gr.078352.108
PMCID:
PMC2556270
AbstractArticlePDF–493K
19.
Regulatory Factor X4 Variant 3: A Transcription Factor Involved in Brain Development and Disease
Donghui Zhang, Darryl C. Zeldin, Perry J. Blackshear
J Neurosci Res. Author manuscript; available in PMC 2008 May 5.
Published in final edited form as: J Neurosci Res. 2007 Dec; 85(16): 3515–3522. doi: 10.1002/jnr.21356
PMCID:
PMC2367213
AbstractArticlePDF–700K
20.
G-protein Pathway Suppressor 2 (GPS2) Interacts with the Regulatory Factor X4 Variant 3 (RFX4_v3) and Functions as a Transcriptional Co-activator
Donghui Zhang, G. Jean Harry, Perry J. Blackshear, Darryl C. Zeldin
J Biol Chem. 2008 Mar 28; 283(13): 8580–8590. doi: 10.1074/jbc.M708209200
PMCID:
PMC2365754
AbstractArticlePDF–536K

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