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Select item 101057361.

Next-generation large-scale binary protein interaction network for Drosophila melanogaster

Hong-Wen Tang, Kerstin Spirohn, Yanhui Hu, Tong Hao, István A. Kovács, Yue Gao, Richard Binari, Donghui Yang-Zhou, Kenneth H. Wan, Joel S. Bader, Dawit Balcha, Wenting Bian, Benjamin W. Booth, Atina G. Coté, Steffi de Rouck, Alice Desbuleux, Kah Yong Goh, Dae-Kyum Kim, Jennifer J. Knapp, Wen Xing Lee, Irma Lemmens, Cathleen Li, Mian Li, Roujia Li, Hyobin Julianne Lim, Yifang Liu, Katja Luck, Dylan Markey, Carl Pollis, Sudharshan Rangarajan, Jonathan Rodiger, Sadie Schlabach, Yun Shen, Dayag Sheykhkarimli, Bridget TeeKing, Frederick P. Roth, Jan Tavernier, Michael A. Calderwood, David E. Hill, Susan E. Celniker, Marc Vidal, Norbert Perrimon, Stephanie E. Mohr

Nat Commun. 2023; 14: 2162. Published online 2023 Apr 15. doi: 10.1038/s41467-023-37876-0

PMCID:: PMC10105736

Abstract Article PDF–3.2M

Select item 98449892.

Inter-organ Wingless/Ror/Akt signaling regulates nutrient-dependent hyperarborization of somatosensory neurons

Yasutetsu Kanaoka, Koun Onodera, Kaori Watanabe, Yusaku Hayashi, Tadao Usui, Tadashi Uemura, Yukako Hattori

eLife. 2023; 12: e79461. Published online 2023 Jan 17. doi: 10.7554/eLife.79461

PMCID:: PMC9844989

Abstract Article PDF–11M

Select item 79861943.

Temperature, rainfall and wind variables underlie environmental adaptation in natural populations of Drosophila melanogaster

María Bogaerts‐Márquez, Sara Guirao‐Rico, Mathieu Gautier, Josefa González

Mol Ecol. 2021 Feb; 30(4): 938–954. Published online 2021 Jan 26. doi: 10.1111/mec.15783

PMCID:: PMC7986194

Abstract Article PDF–1.0M

Select item 76486484.

A single-cell atlas and lineage analysis of the adult Drosophila ovary

Katja Rust, Lauren E. Byrnes, Kevin Shengyang Yu, Jason S. Park, Julie B. Sneddon, Aaron D. Tward, Todd G. Nystul

Nat Commun. 2020; 11: 5628. Published online 2020 Nov 6. doi: 10.1038/s41467-020-19361-0

Correction in:: Nat Commun. 2021; 12: 5951.

PMCID:: PMC7648648

Abstract Article PDF–6.1M

Select item 75368545.

Regulation of Body Size and Growth Control

Michael J. Texada, Takashi Koyama, Kim Rewitz

Genetics. 2020 Oct; 216(2): 269–313. Published online 2020 Jul 6. doi: 10.1534/genetics.120.303095

PMCID:: PMC7536854

Abstract Article PDF–2.2M

Select item 73680496.

Adaptation of gene loci to heterochromatin in the course of Drosophila evolution is associated with insulator proteins

Sergei Yu. Funikov, Alexander P. Rezvykh, Dina A. Kulikova, Elena S. Zelentsova, Lyudmila A. Protsenko, Lyubov N. Chuvakova, Venera I. Tyukmaeva, Irina R. Arkhipova, Michael B. Evgen’ev

Sci Rep. 2020; 10: 11893. Published online 2020 Jul 17. doi: 10.1038/s41598-020-68879-2

PMCID:: PMC7368049

Abstract Article PDF–8.8M

Select item 70133797.

Partial Inhibition of RNA Polymerase I Promotes Animal Health and Longevity

Guillermo Martínez Corrales, Danny Filer, Katharina C. Wenz, Abbie Rogan, George Phillips, Mengjia Li, Yodit Feseha, Susan J. Broughton, Nazif Alic

Cell Rep. 2020 Feb 11; 30(6): 1661–1669.e4. Published online 2020 Feb 11. doi: 10.1016/j.celrep.2020.01.017

PMCID:: PMC7013379

Abstract Article

Select item 69615788.

CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans

Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang

Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119

PMCID:: PMC6961578

Abstract Article PDF–3.6M

Select item 66869459.

Next-Generation Sequencing Reveals Increased Anti-oxidant Response and Ecdysone Signaling in STAT Supercompetitors in Drosophila

Poojitha Sitaram, Sean Lu, Sneh Harsh, Salvador C. Herrera, Erika A. Bach

G3 (Bethesda) 2019 Aug; 9(8): 2609–2622. Published online 2019 Jun 21. doi: 10.1534/g3.119.400345

PMCID:: PMC6686945

Abstract Article PDF–2.0M

Select item 570780510.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 568900211.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 549917412.

Genetic Dissection of Nutrition-Induced Plasticity in Insulin/Insulin-Like Growth Factor Signaling and Median Life Span in a Drosophila Multiparent Population

Patrick D. Stanley, Enoch Ng’oma, Siri O’Day, Elizabeth G. King

Genetics. 2017 Jun; 206(2): 587–602. Published online 2017 Jun 6. doi: 10.1534/genetics.116.197780

PMCID:: PMC5499174

Abstract Article PDF–1.7M

Select item 540616713.

Mobile-phone radiation-induced perturbation of gene-expression profiling, redox equilibrium and sporadic-apoptosis control in the ovary of Drosophila melanogaster

Areti K. Manta, Deppie Papadopoulou, Alexander P. Polyzos, Adamantia F. Fragopoulou, Aikaterini S. Skouroliakou, Dimitris Thanos, Dimitrios J. Stravopodis, Lukas H. Margaritis

Fly (Austin) 2017; 11(2): 75–95. Published online 2016 Dec 14. doi: 10.1080/19336934.2016.1270487

PMCID:: PMC5406167

Abstract Article PDF–1.4M

Select item 498142414.

Comparative Genomic Analyses Provide New Insights into the Evolutionary Dynamics of Heterochromatin in Drosophila

Ruggiero Caizzi, Roberta Moschetti, Lucia Piacentini, Laura Fanti, Renè Massimiliano Marsano, Patrizio Dimitri

PLoS Genet. 2016 Aug; 12(8): e1006212. Published online 2016 Aug 11. doi: 10.1371/journal.pgen.1006212

PMCID:: PMC4981424

Abstract Article PDF–6.5M

Select item 497890015.

A Combination of CRISPR/Cas9 and Standardized RNAi as a Versatile Platform for the Characterization of Gene Function

Sebastian Wissel, Anja Kieser, Tetsuo Yasugi, Peter Duchek, Elisabeth Roitinger, Joseph Gokcezade, Victoria Steinmann, Ulrike Gaul, Karl Mechtler, Klaus Förstemann, Jürgen A. Knoblich, Ralph A. Neumüller

G3 (Bethesda) 2016 Aug; 6(8): 2467–2478. Published online 2016 Jun 7. doi: 10.1534/g3.116.028571

PMCID:: PMC4978900

Abstract Article PDF–3.0M

Select item 488965816.

mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster

Gildas Lepennetier, Francesco Catania

G3 (Bethesda) 2016 Jun; 6(6): 1617–1626. Published online 2016 Mar 28. doi: 10.1534/g3.116.029231

PMCID:: PMC4889658

Abstract Article PDF–1.5M

Select item 452833017.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 452832918.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929

PMCID:: PMC4528329

Abstract Article PDF–4.9M

Select item 435288719.

The Release 6 reference sequence of the Drosophila melanogaster genome

Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker

Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114

PMCID:: PMC4352887

Abstract Article PDF–1022K

Select item 427152720.

Phylostratigraphic Bias Creates Spurious Patterns of Genome Evolution

Bryan A. Moyers, Jianzhi Zhang

Mol Biol Evol. 2015 Jan 1; 32(1): 258–267. Published online 2014 Oct 13. doi: 10.1093/molbev/msu286

Correction in:: Mol Biol Evol. 2016 Nov; 33(11): 3031.

PMCID:: PMC4271527

Abstract Article PDF–618K

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