PMC Links for GEO Profiles (Select 40717376) - PMC

Di Peng, Liubin Zheng, Dan Liu, Cheng Han, Xin Wang, Yan Yang, Li Song, Miaoying Zhao, Yanfeng Wei, Jiayi Li, Xiaoxue Ye, Yuxiang Wei, Zihao Feng, Xinhe Huang, Miaomiao Chen, Yujie Gou, Yu Xue, Luoying Zhang

Nat Commun. 2024; 15: 3685. Published online 2024 May 1. doi: 10.1038/s41467-024-48005-w

PMCID:: PMC11063160

Abstract Article PDF–2.7M

Select item 110324335.

Genetic mechanism regulating diversity in the placement of eyes on the head of animals

Oorvashi Roy Puli, Neha Gogia, Anuradha Venkatakrishnan Chimata, Takeshi Yorimitsu, Hideki Nakagoshi, Madhuri Kango-Singh, Amit Singh

Proc Natl Acad Sci U S A. 2024 Apr 16; 121(16): e2316244121. Published online 2024 Apr 8. doi: 10.1073/pnas.2316244121

PMCID:: PMC11032433

Abstract Article PDF–4.8M

Select item 108477156.

Fourth Chromosome Resource Project: a comprehensive resource for genetic analysis in Drosophila that includes humanized stocks

Michael J Stinchfield, Brandon P Weasner, Bonnie M Weasner, David Zhitomersky, Justin P Kumar, Michael B O’Connor, Stuart J Newfeld

Genetics. 2024 Feb; 226(2): iyad201. Published online 2023 Nov 20. doi: 10.1093/genetics/iyad201

PMCID:: PMC10847715

Abstract Article PDF–1.2M

Select item 104827007.

SCENIC+: single-cell multiomic inference of enhancers and gene regulatory networks

Carmen Bravo González-Blas, Seppe De Winter, Gert Hulselmans, Nikolai Hecker, Irina Matetovici, Valerie Christiaens, Suresh Poovathingal, Jasper Wouters, Sara Aibar, Stein Aerts

Nat Methods. 2023; 20(9): 1355–1367. Published online 2023 Jul 13. doi: 10.1038/s41592-023-01938-4

PMCID:: PMC10482700

Abstract Article PDF–27M

Select item 104388408.

Growth deregulation and interaction with host hemocytes contribute to tumor progression in a Drosophila brain tumor model

Chrysanthi Voutyraki, Alexandros Choromidis, Anastasia Meligkounaki, Nikolaos Andreas Vlachopoulos, Vasiliki Theodorou, Sofia Grammenoudi, Emmanouil Athanasiadis, Sara Monticelli, Angela Giangrande, Christos Delidakis, Evanthia Zacharioudaki

Proc Natl Acad Sci U S A. 2023 Aug 15; 120(33): e2221601120. Published online 2023 Aug 7. doi: 10.1073/pnas.2221601120

PMCID:: PMC10438840

Abstract Article PDF–4.3M

Select item 102438769.

Transcriptional and Epigenetic Regulation of Temporal Patterning in Neural Progenitors

Alokananda Ray, Hailun Zhu, Andrew Ding, Xin Li

Dev Biol. Author manuscript; available in PMC 2023 Jun 6.

Published in final edited form as: Dev Biol. 2022 Jan; 481: 116–128. Published online 2021 Oct 16. doi: 10.1016/j.ydbio.2021.10.006

PMCID:: PMC10243876

Abstract Article PDF–1.2M

Select item 1010573610.

Next-generation large-scale binary protein interaction network for Drosophila melanogaster

Hong-Wen Tang, Kerstin Spirohn, Yanhui Hu, Tong Hao, István A. Kovács, Yue Gao, Richard Binari, Donghui Yang-Zhou, Kenneth H. Wan, Joel S. Bader, Dawit Balcha, Wenting Bian, Benjamin W. Booth, Atina G. Coté, Steffi de Rouck, Alice Desbuleux, Kah Yong Goh, Dae-Kyum Kim, Jennifer J. Knapp, Wen Xing Lee, Irma Lemmens, Cathleen Li, Mian Li, Roujia Li, Hyobin Julianne Lim, Yifang Liu, Katja Luck, Dylan Markey, Carl Pollis, Sudharshan Rangarajan, Jonathan Rodiger, Sadie Schlabach, Yun Shen, Dayag Sheykhkarimli, Bridget TeeKing, Frederick P. Roth, Jan Tavernier, Michael A. Calderwood, David E. Hill, Susan E. Celniker, Marc Vidal, Norbert Perrimon, Stephanie E. Mohr

Nat Commun. 2023; 14: 2162. Published online 2023 Apr 15. doi: 10.1038/s41467-023-37876-0

PMCID:: PMC10105736

Abstract Article PDF–3.2M

Select item 1008575611.

Polycomb response elements reduce leaky expression of Cas9 under temperature-inducible Hsp70Bb promoter in Drosophila melanogaster

Natalie Warsinger-Pepe, Carly Chang, Connor R Desroberts, Omar S Akbari

G3 (Bethesda) 2023 Apr; 13(4): jkad024. Published online 2023 Jan 27. doi: 10.1093/g3journal/jkad024

PMCID:: PMC10085756

Abstract Article PDF–1.4M

Select item 993870012.

From temporal patterning to neuronal connectivity in Drosophila type I neuroblast lineages

Heather Q Pollington, Austin Q Seroka, Chris Q Doe

Semin Cell Dev Biol. Author manuscript; available in PMC 2023 Jun 1.

Published in final edited form as: Semin Cell Dev Biol. 2023 Jun; 142: 4–12. Published online 2022 May 31. doi: 10.1016/j.semcdb.2022.05.022

PMCID:: PMC9938700

Abstract Article PDF–345K

Select item 991746013.

Bilateral JNK activation is a hallmark of interface surveillance and promotes elimination of aberrant cells

Deepti Prasad, Katharina Illek, Friedericke Fischer, Katrin Holstein, Anne-Kathrin Classen

eLife. 2023; 12: e80809. Published online 2023 Feb 6. doi: 10.7554/eLife.80809

PMCID:: PMC9917460

Abstract Article PDF–29M

Select item 980537414.

Development of the ocellar visual system in Drosophila melanogaster

Claude Bernard Jean‐Guillaume, Justin P. Kumar

FEBS J. 2022 Dec; 289(23): 7411–7427. Published online 2022 May 11. doi: 10.1111/febs.16468

PMCID:: PMC9805374

Abstract Article PDF–1.6M

Select item 961679815.

NanoDam identifies Homeobrain (ARX) and Scarecrow (NKX2.1) as conserved temporal factors in the Drosophila central brain and visual system

Jocelyn L.Y. Tang, Anna E. Hakes, Robert Krautz, Takumi Suzuki, Esteban G. Contreras, Paul M. Fox, Andrea H. Brand

Dev Cell. 2022 May 9; 57(9): 1193–1207.e7. doi: 10.1016/j.devcel.2022.04.008

PMCID:: PMC9616798

Abstract Article

Select item 949929716.

Genome-wide analysis identifies Homothorax and Extradenticle as regulators of insulin in Drosophila Insulin-Producing cells

Mattias Winant, Kurt Buhler, Jason Clements, Sofie De Groef, Korneel Hens, Veerle Vulsteke, Patrick Callaerts

PLoS Genet. 2022 Sep; 18(9): e1010380. Published online 2022 Sep 12. doi: 10.1371/journal.pgen.1010380

PMCID:: PMC9499297

Abstract Article PDF–5.0M

Select item 947974617.

Post-transcriptional regulation of transcription factor codes in immature neurons drives neuronal diversity

Wenyue Guan, Stéphanie Bellemin, Mathilde Bouchet, Lalanti Venkatasubramanian, Camille Guillermin, Anne Laurençon, Chérif Kabir, Aurélien Darnas, Christophe Godin, Séverine Urdy, Richard S. Mann, Jonathan Enriquez

Cell Rep. Author manuscript; available in PMC 2022 Sep 16.

Published in final edited form as: Cell Rep. 2022 Jun 28; 39(13): 110992. doi: 10.1016/j.celrep.2022.110992

PMCID:: PMC9479746

Abstract Article PDF–5.6M

Select item 944123318.

Insect opsins and evo-devo: what have we learned in 25 years?

Kyle J. McCulloch, Aide Macias-Muñoz, Adriana D. Briscoe

Philos Trans R Soc Lond B Biol Sci. October 24, 2022; 377(1862): 20210288. Published online September 5, 2022. doi: 10.1098/rstb.2021.0288

PMCID:: PMC9441233

Abstract Article PDF–1.0M

Select item 942711519.

A Notch-dependent transcriptional mechanism controls expression of temporal patterning factors in Drosophila medulla

Alokananda Ray, Xin Li

eLife. 2022; 11: e75879. Published online 2022 Aug 30. doi: 10.7554/eLife.75879

PMCID:: PMC9427115

Abstract Article PDF–32M

Select item 923968020.

An expanded toolkit for Drosophila gene tagging using synthesized homology donor constructs for CRISPR-mediated homologous recombination

Oguz Kanca, Jonathan Zirin, Yanhui Hu, Burak Tepe, Debdeep Dutta, Wen-Wen Lin, Liwen Ma, Ming Ge, Zhongyuan Zuo, Lu-Ping Liu, Robert W Levis, Norbert Perrimon, Hugo J Bellen

eLife. 2022; 11: e76077. Published online 2022 Jun 20. doi: 10.7554/eLife.76077

PMCID:: PMC9239680

Abstract Article PDF–1.2M

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