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Select item 87222241.

DamID transcriptional profiling identifies the Snail/Scratch transcription factor Kahuli as an Alk target in the Drosophila visceral mesoderm

Patricia Mendoza-Garcia, Swaraj Basu, Sanjay Kumar Sukumar, Badrul Arefin, Georg Wolfstetter, Vimala Anthonydhason, Linnea Molander, Ezgi Uçkun, Henrik Lindehell, Cristina Lebrero-Fernandez, Jan Larsson, Erik Larsson, Mats Bemark, Ruth H. Palmer

Development. 2021 Dec 1; 148(23): dev199465. Published online 2021 Dec 14. doi: 10.1242/dev.199465

PMCID:: PMC8722224

Abstract Article

Select item 75501922.

Topology-driven protein-protein interaction network analysis detects genetic sub-networks regulating reproductive capacity

Tarun Kumar, Leo Blondel, Cassandra G Extavour

eLife. 2020; 9: e54082. Published online 2020 Sep 9. doi: 10.7554/eLife.54082

PMCID:: PMC7550192

Abstract Article PDF–2.8M

Select item 73848563.

The E2 Marie Kondo and the CTLH E3 ligase clear deposited RNA binding proteins during the maternal-to-zygotic transition

Michael Zavortink, Lauren N Rutt, Svetlana Dzitoyeva, Jesslyn C Henriksen, Chloe Barrington, Danielle Y Bilodeau, Miranda Wang, Xiao Xiao Lily Chen, Olivia S Rissland

eLife. 2020; 9: e53889. Published online 2020 Jun 23. doi: 10.7554/eLife.53889

PMCID:: PMC7384856

Abstract Article PDF–4.5M

Select item 73665224.

Dietary Adaptation of Microbiota in Drosophila Requires NF-κB-Dependent Control of the Translational Regulator 4E-BP

Crissie Vandehoef, Maral Molaei, Jason Karpac

Cell Rep. Author manuscript; available in PMC 2020 Jul 17.

Published in final edited form as: Cell Rep. 2020 Jun 9; 31(10): 107736. doi: 10.1016/j.celrep.2020.107736

PMCID:: PMC7366522

Abstract Article PDF–1.9M

Select item 72170295.

From man to fly – convergent evidence links FBXO25 to ADHD and comorbid psychiatric phenotypes

Benjamin Harich, Marieke Klein, Charlotte W. Ockeloen, Monique van der Voet, Marlies Schimmel‐Naber, Nicole de Leeuw, Annette Schenck, Barbara Franke

J Child Psychol Psychiatry. 2020 May; 61(5): 545–555. Published online 2019 Dec 17. doi: 10.1111/jcpp.13161

PMCID:: PMC7217029

Abstract Article PDF–585K

Select item 69615786.

CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans

Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang

Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119

PMCID:: PMC6961578

Abstract Article PDF–3.6M

Select item 59064497.

The impact of genome variation and diet on the metabolic phenotype and microbiome composition of Drosophila melanogaster

Lisa Jehrke, Fiona A. Stewart, Andrea Droste, Mathias Beller

Sci Rep. 2018; 8: 6215. Published online 2018 Apr 18. doi: 10.1038/s41598-018-24542-5

PMCID:: PMC5906449

Abstract Article PDF–4.5M

Select item 57078058.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 56890029.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 452833010.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 452832911.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929

PMCID:: PMC4528329

Abstract Article PDF–4.9M

Select item 443082912.

REPTOR and REPTOR-BP regulate organismal metabolism and transcription downstream of TORC1

Marcel Tiebe, Marilena Lutz, Adriana De La Garza, Tina Buechling, Michael Boutros, Aurelio A. Teleman

Dev Cell. Author manuscript; available in PMC 2016 May 4.

Published in final edited form as: Dev Cell. 2015 May 4; 33(3): 272–284. Published online 2015 Apr 23. doi: 10.1016/j.devcel.2015.03.013

PMCID:: PMC4430829

Abstract Article PDF–1.8M

Select item 435288713.

The Release 6 reference sequence of the Drosophila melanogaster genome

Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker

Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114

PMCID:: PMC4352887

Abstract Article PDF–1022K

Select item 427152714.

Phylostratigraphic Bias Creates Spurious Patterns of Genome Evolution

Bryan A. Moyers, Jianzhi Zhang

Mol Biol Evol. 2015 Jan 1; 32(1): 258–267. Published online 2014 Oct 13. doi: 10.1093/molbev/msu286

Correction in:: Mol Biol Evol. 2016 Nov; 33(11): 3031.

PMCID:: PMC4271527

Abstract Article PDF–618K

Select item 404507315.

Microbiota-Induced Changes in Drosophila melanogaster Host Gene Expression and Gut Morphology

Nichole A. Broderick, Nicolas Buchon, Bruno Lemaitre

mBio. 2014 May-Jun; 5(3): e01117-14. Published online 2014 May 27. doi: 10.1128/mBio.01117-14

PMCID:: PMC4045073

Abstract Article PDF–2.2M

Select item 398048416.

Mechanisms of Muscle Growth and Atrophy in Mammals and Drosophila

Rosanna Piccirillo, Fabio Demontis, Norbert Perrimon, Alfred L. Goldberg

Dev Dyn. Author manuscript; available in PMC 2015 Feb 1.

Published in final edited form as: Dev Dyn. 2014 Feb; 243(2): 201–215. Published online 2013 Oct 24. doi: 10.1002/dvdy.24036

PMCID:: PMC3980484

Abstract Article PDF–2.7M

Select item 390458417.

Drosophila miR-277 controls branched-chain amino acid catabolism and affects lifespan

Stephanie Maria Esslinger, Björn Schwalb, Stephanie Helfer, Katharina Maria Michalik, Heidi Witte, Kerstin C. Maier, Dietmar Martin, Bernhard Michalke, Achim Tresch, Patrick Cramer, Klaus Förstemann

RNA Biol. 2013 Jun 1; 10(6): 1042–1056. Published online 2013 Apr 30. doi: 10.4161/rna.24810

PMCID:: PMC3904584

Abstract Article PDF–2.3M

Select item 353067718.

High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression

Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras

Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112

PMCID:: PMC3530677

Abstract Article PDF–1.5M

Select item 346946719.

The Many Landscapes of Recombination in Drosophila melanogaster

Josep M. Comeron, Ramesh Ratnappan, Samuel Bailin

PLoS Genet. 2012 Oct; 8(10): e1002905. Published online 2012 Oct 11. doi: 10.1371/journal.pgen.1002905

PMCID:: PMC3469467

Abstract Article PDF–1.6M

Select item 328106720.

Defining Components of the ßcatenin Destruction Complex and Exploring Its Regulation and Mechanisms of Action during Development

David M. Roberts, Mira I. Pronobis, Kelly M. Alexandre, Gregory C. Rogers, John S. Poulton, Daniel E. Schneider, Kuo-Chen Jung, Daniel J. McKay, Mark Peifer

PLoS One. 2012; 7(2): e31284. Published online 2012 Feb 16. doi: 10.1371/journal.pone.0031284

PMCID:: PMC3281067

Abstract Article PDF–9.5M

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