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Select item 109627591.

A comprehensive Drosophila resource to identify key functional interactions between SARS-CoV-2 factors and host proteins

Annabel Guichard, Shenzhao Lu, Oguz Kanca, Daniel Bressan, Yan Huang, Mengqi Ma, Sara Sanz Juste, Jonathan C. Andrews, Kristy L. Jay, Marketta Sneider, Ruth Schwartz, Mei-Chu Huang, Danqing Bei, Hongling Pan, Liwen Ma, Wen-Wen Lin, Ankush Auradkar, Pranjali Bhagwat, Soo Park, Kenneth H. Wan, Takashi Ohsako, Toshiyuki Takano-Shimizu, Susan E. Celniker, Michael F. Wangler, Shinya Yamamoto, Hugo J. Bellen, Ethan Bier

Cell Rep. Author manuscript; available in PMC 2024 Mar 25.

Published in final edited form as: Cell Rep. 2023 Aug 29; 42(8): 112842. Published online 2023 Jul 20. doi: 10.1016/j.celrep.2023.112842

PMCID:: PMC10962759

Abstract Article PDF–3.0M

Select item 104951092.

Fat body-specific reduction of CTPS alleviates HFD-induced obesity

Jingnan Liu, Yuanbing Zhang, Qiao-Qi Wang, Youfang Zhou, Ji-Long Liu

eLife. 2023; 12: e85293. Published online 2023 Sep 11. doi: 10.7554/eLife.85293

PMCID:: PMC10495109

Abstract Article PDF–13M

Select item 68943973.

Steroid signaling establishes a female metabolic state and regulates SREBP to control oocyte lipid accumulation

Matthew H. Sieber, Allan C. Spradling

Curr Biol. Author manuscript; available in PMC 2019 Dec 5.

Published in final edited form as: Curr Biol. 2015 Apr 20; 25(8): 993–1004. Published online 2015 Mar 19. doi: 10.1016/j.cub.2015.02.019

PMCID:: PMC6894397

Abstract Article PDF–2.5M

Select item 57078054.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 56890025.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 48896586.

mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster

Gildas Lepennetier, Francesco Catania

G3 (Bethesda) 2016 Jun; 6(6): 1617–1626. Published online 2016 Mar 28. doi: 10.1534/g3.116.029231

PMCID:: PMC4889658

Abstract Article PDF–1.5M

Select item 47380057.

Proteome-wide dataset supporting the study of ancient metazoan macromolecular complexes

Sadhna Phanse, Cuihong Wan, Blake Borgeson, Fan Tu, Kevin Drew, Greg Clark, Xuejian Xiong, Olga Kagan, Julian Kwan, Alexandr Bezginov, Kyle Chessman, Swati Pal, Graham Cromar, Ophelia Papoulas, Zuyao Ni, Daniel R. Boutz, Snejana Stoilova, Pierre C. Havugimana, Xinghua Guo, Ramy H. Malty, Mihail Sarov, Jack Greenblatt, Mohan Babu, W. Brent Derry, Elisabeth R. Tillier, John B. Wallingford, John Parkinson, Edward M. Marcotte, Andrew Emili

Data Brief. 2016 Mar; 6: 715–721. Published online 2015 Dec 12. doi: 10.1016/j.dib.2015.11.062

PMCID:: PMC4738005

Abstract Article PDF–205K

Select item 46560408.

Drosophila and Caenorhabditis elegans as Discovery Platforms for Genes Involved in Human Alcohol Use Disorder

Mike Grotewiel, Jill C. Bettinger

Alcohol Clin Exp Res. Author manuscript; available in PMC 2016 Feb 1.

Published in final edited form as: Alcohol Clin Exp Res. 2015 Aug; 39(8): 1292–1311. Published online 2015 Jul 14. doi: 10.1111/acer.12785

PMCID:: PMC4656040

Abstract Article PDF–811K

Select item 45283309.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 452832910.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929

PMCID:: PMC4528329

Abstract Article PDF–4.9M

Select item 435288711.

The Release 6 reference sequence of the Drosophila melanogaster genome

Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker

Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114

PMCID:: PMC4352887

Abstract Article PDF–1022K

Select item 409015512.

Signaling Networks Converge on TORC1-SREBP Activity to Promote Endoplasmic Reticulum Homeostasis

Miguel Sanchez-Alvarez, Fabian Finger, Maria del Mar Arias-Garcia, Vicky Bousgouni, Patricia Pascual-Vargas, Chris Bakal

PLoS One. 2014; 9(7): e101164. Published online 2014 Jul 9. doi: 10.1371/journal.pone.0101164

PMCID:: PMC4090155

Abstract Article PDF–5.5M

Select item 372820913.

Gene-by-Temperature Interactions and Candidate Plasticity Genes for Morphological Traits in Drosophila melanogaster

Valeria Paula Carreira, Marcos A. Imberti, Julián Mensch, Juan José Fanara

PLoS One. 2013; 8(7): e70851. Published online 2013 Jul 30. doi: 10.1371/journal.pone.0070851

PMCID:: PMC3728209

Abstract Article PDF–1.4M

Select item 353067714.

High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression

Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras

Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112

PMCID:: PMC3530677

Abstract Article PDF–1.5M

Select item 346946715.

The Many Landscapes of Recombination in Drosophila melanogaster

Josep M. Comeron, Ramesh Ratnappan, Samuel Bailin

PLoS Genet. 2012 Oct; 8(10): e1002905. Published online 2012 Oct 11. doi: 10.1371/journal.pgen.1002905

PMCID:: PMC3469467

Abstract Article PDF–1.6M

Select item 338681816.

Regulation of lipogenesis by cyclin-dependent kinase 8–mediated control of SREBP-1

Xiaoping Zhao, Daorong Feng, Qun Wang, Arian Abdulla, Xiao-Jun Xie, Jie Zhou, Yan Sun, Ellen S. Yang, Lu-Ping Liu, Bhavapriya Vaitheesvaran, Lauren Bridges, Irwin J. Kurland, Randy Strich, Jian-Quan Ni, Chenguang Wang, Johan Ericsson, Jeffrey E. Pessin, Jun-Yuan Ji, Fajun Yang

J Clin Invest. 2012 Jul 2; 122(7): 2417–2427. Published online 2012 Jun 11. doi: 10.1172/JCI61462

PMCID:: PMC3386818

Abstract Article PDF–2.0M

Select item 307737617.

Tissue-Autonomous Function of Drosophila Seipin in Preventing Ectopic Lipid Droplet Formation

Yuan Tian, Junfeng Bi, Guanghou Shui, Zhonghua Liu, Yanhui Xiang, Yuan Liu, Markus R. Wenk, Hongyuan Yang, Xun Huang

PLoS Genet. 2011 Apr; 7(4): e1001364. Published online 2011 Apr 14. doi: 10.1371/journal.pgen.1001364

PMCID:: PMC3077376

Abstract Article PDF–5.6M

Select item 307052718.

Transcriptional Networks for Alcohol Sensitivity in Drosophila melanogaster

Tatiana V. Morozova, Trudy F. C. Mackay, Robert R. H. Anholt

Genetics. 2011 Apr; 187(4): 1193–1205. doi: 10.1534/genetics.110.125229

PMCID:: PMC3070527

Abstract Article PDF–3.7M

Select item 305286819.

Other ways to skin a cat: Activating SREBP without Scap

Cafer Ozdemir, Robert B Rawson

Fly (Austin) 2011 Jan-Mar; 5(1): 3–6. Published online 2011 Jan 1. doi: 10.4161/fly.5.1.13475

PMCID:: PMC3052868

Abstract Article PDF–492K

Select item 304044120.

A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionary-conserved pain gene

G. Gregory Neely, Andreas Hess, Michael Costigan, Alex C. Keene, Spyros Goulas, Michiel Langeslag, Robert S Griffin, Inna Belfer, Feng Dai, Shad Smith, Luda Diatchenko, Vaijayanti Gupta, Cui-ping Xia, Sabina Amann, Silke Kreitz, Cornelia Heindl-Erdmann, Susanne Wolz, Cindy V. Ly, Suchir Arora, Rinku Sarangi, Debasis Dan, Maria Novatchkova, Mark Rosenzweig, Dustin Gibson, Darwin Truong, Daniel Schramek, Tamara Zoranovic, Shane J. F. Cronin, Belinda Angjeli, Kay Brune, Georg Dietzl, William Maixner, Arabella Meixner, Winston Thomas, J. Andrew Pospisilik, Mattias Alenius, Michaela Kress, Sai Subramaniam, Paul A. Garrity, Hugo J. Bellen, Clifford J. Woolf, Josef M. Penninger

Cell. Author manuscript; available in PMC 2011 Nov 12.

Published in final edited form as: Cell. 2010 Nov 12; 143(4): 628–638. doi: 10.1016/j.cell.2010.09.047

PMCID:: PMC3040441

Abstract Article PDF–2.0M

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