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Items: 1 to 20 of 280

1.
Multifaceted effects on even-skipped transcriptional dynamics upon Krüppel dosage changes
Shufan Lin, Bomyi Lim
Development. 2024 Mar 1; 151(5): dev202132. Published online 2024 Mar 4. doi: 10.1242/dev.202132
PMCID:
PMC10948998
AbstractArticle
2.
Functional analysis of the Drosophila eve locus in response to non-canonical combinations of gap gene expression levels
Netta Haroush, Michal Levo, Eric Wieschaus, Thomas Gregor
Dev Cell. Author manuscript; available in PMC 2024 Dec 4.
Published in final edited form as: Dev Cell. 2023 Dec 4; 58(23): 2789–2801.e5. Published online 2023 Oct 26. doi: 10.1016/j.devcel.2023.10.001
PMCID:
PMC10872916
AbstractArticlePDF–2.0M
3.
Revisiting bicoid function: complete inactivation reveals an additional fundamental role in Drosophila egg geometry specification
Stefan Baumgartner
Hereditas. 2024; 161: 1. Published online 2024 Jan 2. doi: 10.1186/s41065-023-00305-9
PMCID:
PMC10759373
AbstractArticlePDF–3.1M
4.
Multi-level regulation of even-skipped stripes by the ubiquitous factor Zelda
Timothy R. Bishop, Pinar Onal, Zhe Xu, Michael Zheng, Himari Gunasinghe, Chung-Yi Nien, Stephen Small, Rhea R. Datta
Development. 2023 Dec 1; 150(23): dev201860. Published online 2023 Nov 27. doi: 10.1242/dev.201860
PMCID:
PMC10730019
AbstractArticle
5.
In-silico identification and comparison of transcription factor binding sites cluster in anterior-posterior patterning genes in Drosophila melanogaster and Tribolium castaneum
Anshika Moudgil, Ranbir Chander Sobti, Tejinder Kaur
PLoS One. 2023; 18(8): e0290035. Published online 2023 Aug 17. doi: 10.1371/journal.pone.0290035
PMCID:
PMC10434971
AbstractArticlePDF–2.1M
6.
Modulation of transcription burst amplitude underpins dosage compensation in the Drosophila embryo
Lauren Forbes Beadle, Hongpeng Zhou, Magnus Rattray, Hilary L. Ashe
Cell Rep. 2023 Apr 25; 42(4): 112382. Published online 2023 Apr 14. doi: 10.1016/j.celrep.2023.112382
PMCID:
PMC10283159
AbstractArticle
7.
Next-generation large-scale binary protein interaction network for Drosophila melanogaster
Hong-Wen Tang, Kerstin Spirohn, Yanhui Hu, Tong Hao, István A. Kovács, Yue Gao, Richard Binari, Donghui Yang-Zhou, Kenneth H. Wan, Joel S. Bader, Dawit Balcha, Wenting Bian, Benjamin W. Booth, Atina G. Coté, Steffi de Rouck, Alice Desbuleux, Kah Yong Goh, Dae-Kyum Kim, Jennifer J. Knapp, Wen Xing Lee, Irma Lemmens, Cathleen Li, Mian Li, Roujia Li, Hyobin Julianne Lim, Yifang Liu, Katja Luck, Dylan Markey, Carl Pollis, Sudharshan Rangarajan, Jonathan Rodiger, Sadie Schlabach, Yun Shen, Dayag Sheykhkarimli, Bridget TeeKing, Frederick P. Roth, Jan Tavernier, Michael A. Calderwood, David E. Hill, Susan E. Celniker, Marc Vidal, Norbert Perrimon, Stephanie E. Mohr
Nat Commun. 2023; 14: 2162. Published online 2023 Apr 15. doi: 10.1038/s41467-023-37876-0
PMCID:
PMC10105736
AbstractArticlePDF–3.2M
8.
Shaping the scaling characteristics of gap gene expression patterns in Drosophila
Ruoqing Xu, Fei Dai, Honggang Wu, Renjie Jiao, Feng He, Jun Ma
Heliyon. 2023 Feb; 9(2): e13623. Published online 2023 Feb 10. doi: 10.1016/j.heliyon.2023.e13623
PMCID:
PMC9984453
AbstractArticlePDF–3.2M
9.
Mechanisms of Interaction between Enhancers and Promoters in Three Drosophila Model Systems
Olga Kyrchanova, Vladimir Sokolov, Pavel Georgiev
Int J Mol Sci. 2023 Feb; 24(3): 2855. Published online 2023 Feb 2. doi: 10.3390/ijms24032855
PMCID:
PMC9917889
AbstractArticlePDF–2.2M
10.
Enteric bacterial infection in Drosophila induces whole-body alterations in metabolic gene expression independently of the immune deficiency signaling pathway
Rujuta Deshpande, Byoungchun Lee, Savraj S Grewal
G3 (Bethesda) 2022 Nov; 12(11): jkac163. Published online 2022 Jul 4. doi: 10.1093/g3journal/jkac163
PMCID:
PMC9635644
AbstractArticlePDF–2.2M
11.
RNA Polymerase II “Pause” Prepares Promoters for Upcoming Transcription during Drosophila Development
Marina Yu. Mazina, Elena V. Kovalenko, Aleksandra A. Evdokimova, Maksim Erokhin, Darya Chetverina, Nadezhda E. Vorobyeva
Int J Mol Sci. 2022 Sep; 23(18): 10662. Published online 2022 Sep 13. doi: 10.3390/ijms231810662
PMCID:
PMC9503990
AbstractArticlePDF–3.8M
12.
Latent space of a small genetic network: Geometry of dynamics and information
Rabea Seyboldt, Juliette Lavoie, Adrien Henry, Jules Vanaret, Mariela D. Petkova, Thomas Gregor, Paul François
Proc Natl Acad Sci U S A. 2022 Jun 28; 119(26): e2113651119. Published online 2022 Jun 22. doi: 10.1073/pnas.2113651119
PMCID:
PMC9245618
AbstractArticlePDF–3.4M
13.
Photoperiod-Dependent Expression of MicroRNA in Drosophila
Mirko Pegoraro, Bettina Fishman, Valeria Zonato, Georgios Zouganelis, Amanda Francis, Charalambos P. Kyriacou, Eran Tauber
Int J Mol Sci. 2022 May; 23(9): 4935. Published online 2022 Apr 29. doi: 10.3390/ijms23094935
PMCID:
PMC9100521
AbstractArticlePDF–1.5M
14.
Optogenetic control of the Bicoid morphogen reveals fast and slow modes of gap gene regulation
Anand P. Singh, Ping Wu, Sergey Ryabichko, João Raimundo, Michael Swan, Eric Wieschaus, Thomas Gregor, Jared E. Toettcher
Cell Rep. Author manuscript; available in PMC 2022 Apr 20.
Published in final edited form as: Cell Rep. 2022 Mar 22; 38(12): 110543. doi: 10.1016/j.celrep.2022.110543
PMCID:
PMC9019726
AbstractArticlePDF–2.3M
15.
Mitochondria as environments for the nuclear genome in Drosophila: mitonuclear G×G×E
David M Rand, James A Mossman, Adam N Spierer, John A Santiago
J Hered. 2022 Jan; 113(1): 37–47. Published online 2021 Dec 29. doi: 10.1093/jhered/esab066
PMCID:
PMC8851671
AbstractArticlePDF–15M
16.
Mechanistic Gene Networks Inferred from Single-Cell Data with an Outlier-Insensitive Method
Jung Min Han, Sudheesha Perera, Zeba Wunderlich, Vipul Periwal
Math Biosci. Author manuscript; available in PMC 2022 Dec 1.
Published in final edited form as: Math Biosci. 2021 Dec; 342: 108722. Published online 2021 Oct 21. doi: 10.1016/j.mbs.2021.108722
PMCID:
PMC8722367
AbstractArticlePDF–3.8M
17.
Application of Domain- and Genotype-Specific Models to Infer Post-Transcriptional Regulation of Segmentation Gene Expression in Drosophila
Maria A. Duk, Vitaly V. Gursky, Maria G. Samsonova, Svetlana Yu. Surkova
Life (Basel) 2021 Nov; 11(11): 1232. Published online 2021 Nov 13. doi: 10.3390/life11111232
PMCID:
PMC8618293
AbstractArticlePDF–1.3M
18.
Patterning with clocks and genetic cascades: Segmentation and regionalization of vertebrate versus insect body plans
Margarete Diaz-Cuadros, Olivier Pourquié, Ezzat El-Sherif
PLoS Genet. 2021 Oct; 17(10): e1009812. Published online 2021 Oct 14. doi: 10.1371/journal.pgen.1009812
PMCID:
PMC8516289
AbstractArticlePDF–1.4M
19.
Polycomb-group recruitment to a Drosophila target gene is the default state that is inhibited by a transcriptional activator
Elnaz Ghotbi, Piao Ye, Taylor Ervin, Anni Kum, Judith Benes, Richard S. Jones
Sci Adv. 2021 Jul; 7(29): eabg1556. Published online 2021 Jul 16. doi: 10.1126/sciadv.abg1556
PMCID:
PMC8284896
AbstractArticlePDF–1.3M
20.
Secrets of secretion—how studies of the Drosophila salivary gland have informed our understanding of the cellular networks underlying secretory organ form and function
Rajprasad Loganathan, Ji Hoon Kim, Michael B. Wells, Deborah J. Andrew
Curr Top Dev Biol. Author manuscript; available in PMC 2021 Jul 1.
Published in final edited form as: Curr Top Dev Biol. 2021; 143: 1–36. Published online 2020 Nov 19. doi: 10.1016/bs.ctdb.2020.09.005
PMCID:
PMC8135252
AbstractArticlePDF–1.1M

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