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    Items: 1 to 20 of 24

    1.
    The pleiotropic functions of Pri smORF peptides synchronize leg development regulators
    Damien Markus, Aurore Pelletier, Muriel Boube, Fillip Port, Michael Boutros, François Payre, Benedikt Obermayer, Jennifer Zanet
    PLoS Genet. 2023 Oct; 19(10): e1011004. Published online 2023 Oct 30. doi: 10.1371/journal.pgen.1011004
    PMCID:
    PMC10635573
    ArticlePDF–4.5M
    2.
    Next-generation large-scale binary protein interaction network for Drosophila melanogaster
    Hong-Wen Tang, Kerstin Spirohn, Yanhui Hu, Tong Hao, István A. Kovács, Yue Gao, Richard Binari, Donghui Yang-Zhou, Kenneth H. Wan, Joel S. Bader, Dawit Balcha, Wenting Bian, Benjamin W. Booth, Atina G. Coté, Steffi de Rouck, Alice Desbuleux, Kah Yong Goh, Dae-Kyum Kim, Jennifer J. Knapp, Wen Xing Lee, Irma Lemmens, Cathleen Li, Mian Li, Roujia Li, Hyobin Julianne Lim, Yifang Liu, Katja Luck, Dylan Markey, Carl Pollis, Sudharshan Rangarajan, Jonathan Rodiger, Sadie Schlabach, Yun Shen, Dayag Sheykhkarimli, Bridget TeeKing, Frederick P. Roth, Jan Tavernier, Michael A. Calderwood, David E. Hill, Susan E. Celniker, Marc Vidal, Norbert Perrimon, Stephanie E. Mohr
    Nat Commun. 2023; 14: 2162. Published online 2023 Apr 15. doi: 10.1038/s41467-023-37876-0
    PMCID:
    PMC10105736
    ArticlePDF–3.2M
    3.
    FoxO suppresses endoplasmic reticulum stress to inhibit growth of Tsc1-deficient tissues under nutrient restriction
    Avantika Gupta, Hugo Stocker
    eLife. 2020; 9: e53159. Published online 2020 Jun 11. doi: 10.7554/eLife.53159
    PMCID:
    PMC7289595
    ArticlePDF–3.5M
    4.
    Developmental regulation of canonical and small ORF translation from mRNAs
    Pedro Patraquim, Muhammad Ali Shahzad Mumtaz, José Ignacio Pueyo, Julie Louise Aspden, Juan-Pablo Couso
    Genome Biol. 2020; 21: 128. Published online 2020 May 29. doi: 10.1186/s13059-020-02011-5
    PMCID:
    PMC7260771
    ArticlePDF–6.5M
    5.
    CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans
    Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang
    Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119
    PMCID:
    PMC6961578
    ArticlePDF–3.6M
    6.
    Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species
    Piero Sanfilippo, Jiayu Wen, Eric C. Lai
    Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0
    PMCID:
    PMC5707805
    ArticlePDF–3.2M
    7.
    Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster
    Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira
    RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117
    PMCID:
    PMC5689002
    ArticlePDF–4.0M
    8.
    Ultra-deep sequencing of ribosome-associated poly-adenylated RNA in early Drosophila embryos reveals hundreds of conserved translated sORFs
    Hongmei Li, Chuansheng Hu, Ling Bai, Hua Li, Mingfa Li, Xiaodong Zhao, Daniel M. Czajkowsky, Zhifeng Shao
    DNA Res. 2016 Dec; 23(6): 571–580. Published online 2016 Aug 24. doi: 10.1093/dnares/dsw040
    PMCID:
    PMC5144680
    ArticlePDF–688K
    9.
    Gene Model Annotations for Drosophila melanogaster: The Rule-Benders
    Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
    G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937
    PMCID:
    PMC4528330
    ArticlePDF–2.2M
    10.
    Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data
    Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
    G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929
    PMCID:
    PMC4528329
    ArticlePDF–4.9M
    11.
    The Release 6 reference sequence of the Drosophila melanogaster genome
    Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker
    Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114
    PMCID:
    PMC4352887
    ArticlePDF–1022K
    12.
    High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression
    Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras
    Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112
    PMCID:
    PMC3530677
    ArticlePDF–1.5M
    13.
    The Many Landscapes of Recombination in Drosophila melanogaster
    Josep M. Comeron, Ramesh Ratnappan, Samuel Bailin
    PLoS Genet. 2012 Oct; 8(10): e1002905. Published online 2012 Oct 11. doi: 10.1371/journal.pgen.1002905
    PMCID:
    PMC3469467
    ArticlePDF–1.6M
    14.
    Genome-Wide Analysis of Self-Renewal in Drosophila Neural Stem Cells by Transgenic RNAi
    Ralph A. Neumüller, Constance Richter, Anja Fischer, Maria Novatchkova, Klaus G. Neumüller, Juergen A. Knoblich
    Cell Stem Cell. 2011 May 6; 8(5): 580–593. doi: 10.1016/j.stem.2011.02.022
    PMCID:
    PMC3093620
    Article
    15.
    A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionary-conserved pain gene
    G. Gregory Neely, Andreas Hess, Michael Costigan, Alex C. Keene, Spyros Goulas, Michiel Langeslag, Robert S Griffin, Inna Belfer, Feng Dai, Shad Smith, Luda Diatchenko, Vaijayanti Gupta, Cui-ping Xia, Sabina Amann, Silke Kreitz, Cornelia Heindl-Erdmann, Susanne Wolz, Cindy V. Ly, Suchir Arora, Rinku Sarangi, Debasis Dan, Maria Novatchkova, Mark Rosenzweig, Dustin Gibson, Darwin Truong, Daniel Schramek, Tamara Zoranovic, Shane J. F. Cronin, Belinda Angjeli, Kay Brune, Georg Dietzl, William Maixner, Arabella Meixner, Winston Thomas, J. Andrew Pospisilik, Mattias Alenius, Michaela Kress, Sai Subramaniam, Paul A. Garrity, Hugo J. Bellen, Clifford J. Woolf, Josef M. Penninger
    Cell. Author manuscript; available in PMC 2011 Nov 12.
    Published in final edited form as: Cell. 2010 Nov 12; 143(4): 628–638. doi: 10.1016/j.cell.2010.09.047
    PMCID:
    PMC3040441
    ArticlePDF–2.0M
    16.
    Gene expression following induction of regeneration in Drosophila wing imaginal discs. Expression profile of regenerating wing discs
    Enrique Blanco, Marina Ruiz-Romero, Sergi Beltran, Manel Bosch, Adrià Punset, Florenci Serras, Montserrat Corominas
    BMC Dev Biol. 2010; 10: 94. Published online 2010 Sep 2. doi: 10.1186/1471-213X-10-94
    PMCID:
    PMC2939566
    ArticlePDF–5.1M
    17.
    A global in vivo Drosophila RNAi screen identifies NOT3 as a conserved regulator of heart function
    G. Gregory Neely, Keiji Kuba, Anthony Cammarato, Kazuya Isobe, Sabine Amann, Liyong Zhang, Mitsushige Murata, Lisa Elmén, Vaijayanti Gupta, Suchir Arora, Rinku Sarangi, Debasis Dan, Susumu Fujisawa, Takako Usami, Cui-ping Xia, Alex C. Keene, Nakissa N. Alayari, Hiroyuki Yamakawa, Ulrich Elling, Christian Berger, Maria Novatchkova, Rubina Koglgruber, Keiichi Fukuda, Hiroshi Nishina, Mitsuaki Isobe, J. Andrew Pospisilik, Yumiko Imai, Arne Pfeufer, Andrew A Hicks, Peter P. Pramstaller, Sai Subramaniam, Akinori Kimura, Karen Ocorr, Rolf Bodmer, Josef M. Penninger
    Cell. Author manuscript; available in PMC 2011 Apr 2.
    Published in final edited form as: Cell. 2010 Apr 2; 141(1): 142–153. doi: 10.1016/j.cell.2010.02.023
    PMCID:
    PMC2855221
    ArticlePDF–5.3M
    18.
    Sequence Finishing and Mapping of Drosophila melanogaster Heterochromatin
    Roger A. Hoskins, Joseph W. Carlson, Cameron Kennedy, David Acevedo, Martha Evans-Holm, Erwin Frise, Kenneth H. Wan, Soo Park, Maria Mendez-Lago, Fabrizio Rossi, Alfredo Villasante, Patrizio Dimitri, Gary H. Karpen, Susan E. Celniker
    Science. Author manuscript; available in PMC 2010 Feb 19.
    Published in final edited form as: Science. 2007 Jun 15; 316(5831): 1625–1628. doi: 10.1126/science.1139816
    PMCID:
    PMC2825053
    ArticlePDF–858K
    19.
    The Release 5.1 Annotation of Drosophila melanogaster Heterochromatin
    Christopher D. Smith, ShengQiang Shu, Christopher J. Mungall, Gary H. Karpen
    Science. Author manuscript; available in PMC 2010 Feb 10.
    Published in final edited form as: Science. 2007 Jun 15; 316(5831): 1586. doi: 10.1126/science.1139815
    Correction in:
    volume 317 on page 1325
    PMCID:
    PMC2819280
    ArticlePDF–1.3M
    20.
    Combined Evidence Annotation of Transposable Elements in Genome Sequences
    Hadi Quesneville, Casey M Bergman, Olivier Andrieu, Delphine Autard, Danielle Nouaud, Michael Ashburner, Dominique Anxolabehere
    PLoS Comput Biol. 2005 Jul; 1(2): e22. Published online 2005 Jul 29. doi: 10.1371/journal.pcbi.0010022
    PMCID:
    PMC1185648
    ArticlePDF–273K

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