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Select item 101057361.

Next-generation large-scale binary protein interaction network for Drosophila melanogaster

Hong-Wen Tang, Kerstin Spirohn, Yanhui Hu, Tong Hao, István A. Kovács, Yue Gao, Richard Binari, Donghui Yang-Zhou, Kenneth H. Wan, Joel S. Bader, Dawit Balcha, Wenting Bian, Benjamin W. Booth, Atina G. Coté, Steffi de Rouck, Alice Desbuleux, Kah Yong Goh, Dae-Kyum Kim, Jennifer J. Knapp, Wen Xing Lee, Irma Lemmens, Cathleen Li, Mian Li, Roujia Li, Hyobin Julianne Lim, Yifang Liu, Katja Luck, Dylan Markey, Carl Pollis, Sudharshan Rangarajan, Jonathan Rodiger, Sadie Schlabach, Yun Shen, Dayag Sheykhkarimli, Bridget TeeKing, Frederick P. Roth, Jan Tavernier, Michael A. Calderwood, David E. Hill, Susan E. Celniker, Marc Vidal, Norbert Perrimon, Stephanie E. Mohr

Nat Commun. 2023; 14: 2162. Published online 2023 Apr 15. doi: 10.1038/s41467-023-37876-0

PMCID:: PMC10105736

Abstract Article PDF–3.2M

Select item 71560442.

Priming exposures to lipopolysaccharides do not affect the induction of Polycomb target genes upon re-exposure

Marco Geigges, Geethika Arekatla, Renato Paro

PLoS One. 2020; 15(4): e0231498. Published online 2020 Apr 14. doi: 10.1371/journal.pone.0231498

PMCID:: PMC7156044

Abstract Article PDF–1.6M

Select item 70262683.

A Connected Network of Interacting Proteins Is Involved in Human-Tau Toxicity in Drosophila

Sébastien Feuillette, Camille Charbonnier, Thierry Frebourg, Dominique Campion, Magalie Lecourtois

Front Neurosci. 2020; 14: 68. Published online 2020 Feb 11. doi: 10.3389/fnins.2020.00068

PMCID:: PMC7026268

Abstract Article PDF–8.7M

Select item 69615784.

CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans

Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang

Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119

PMCID:: PMC6961578

Abstract Article PDF–3.6M

Select item 60732095.

The Trithorax group protein dMLL3/4 instructs the assembly of the zygotic genome at fertilization

Pedro Prudêncio, Leonardo G Guilgur, João Sobral, Jörg D Becker, Rui Gonçalo Martinho, Paulo Navarro‐Costa

EMBO Rep. 2018 Aug; 19(8): e45728. Published online 2018 Jul 23. doi: 10.15252/embr.201845728

PMCID:: PMC6073209

Abstract Article PDF–1.9M

Select item 59064496.

The impact of genome variation and diet on the metabolic phenotype and microbiome composition of Drosophila melanogaster

Lisa Jehrke, Fiona A. Stewart, Andrea Droste, Mathias Beller

Sci Rep. 2018; 8: 6215. Published online 2018 Apr 18. doi: 10.1038/s41598-018-24542-5

PMCID:: PMC5906449

Abstract Article PDF–4.5M

Select item 58274347.

The protein kinase CK2 substrate Jabba modulates lipid metabolism during Drosophila oogenesis

Emily A. McMillan, Sheila M. Longo, Michael D. Smith, Sarah Broskin, Baicheng Lin, Nisha K. Singh, Todd I. Strochlic

J Biol Chem. 2018 Feb 23; 293(8): 2990–3002. Published online 2018 Jan 11. doi: 10.1074/jbc.M117.814657

PMCID:: PMC5827434

Abstract Article PDF–2.6M

Select item 57078058.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 56890029.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 497889410.

A Genome-Wide Screen for Dendritically Localized RNAs Identifies Genes Required for Dendrite Morphogenesis

Mala Misra, Hendia Edmund, Darragh Ennis, Marissa A. Schlueter, Jessica E. Marot, Janet Tambasco, Ida Barlow, Sara Sigurbjornsdottir, Renjith Mathew, Ana Maria Vallés, Waldemar Wojciech, Siegfried Roth, Ilan Davis, Maria Leptin, Elizabeth R. Gavis

G3 (Bethesda) 2016 Aug; 6(8): 2397–2405. Published online 2016 Jun 1. doi: 10.1534/g3.116.030353

PMCID:: PMC4978894

Abstract Article PDF–1.3M

Select item 475155011.

The wavy Mutation Maps to the Inositol 1,4,5-Trisphosphate 3-Kinase 2 (IP3K2) Gene of Drosophila and Interacts with IP3R to Affect Wing Development

Derek M. Dean, Luana S. Maroja, Sarah Cottrill, Brent E. Bomkamp, Kathleen A. Westervelt, David L. Deitcher

G3 (Bethesda) 2016 Feb; 6(2): 299–310. Published online 2015 Nov 25. doi: 10.1534/g3.115.024307

PMCID:: PMC4751550

Abstract Article PDF–9.8M

Select item 452833012.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 452832913.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929

PMCID:: PMC4528329

Abstract Article PDF–4.9M

Select item 438036214.

Network Analyses Reveal Novel Aspects of ALS Pathogenesis

Mario Sanhueza, Andrea Chai, Colin Smith, Brett A. McCray, T. Ian Simpson, J. Paul Taylor, Giuseppa Pennetta

PLoS Genet. 2015 Mar; 11(3): e1005107. Published online 2015 Mar 31. doi: 10.1371/journal.pgen.1005107

PMCID:: PMC4380362

Abstract Article PDF–15M

Select item 435288715.

The Release 6 reference sequence of the Drosophila melanogaster genome

Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker

Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114

PMCID:: PMC4352887

Abstract Article PDF–1022K

Select item 434448816.

Genome-wide features of neuroendocrine regulation in Drosophila by the basic helix-loop-helix transcription factor DIMMED

Tarik Hadžić, Dongkook Park, Katharine C. Abruzzi, Lin Yang, Jennifer S. Trigg, Remo Rohs, Michael Rosbash, Paul H. Taghert

Nucleic Acids Res. 2015 Feb 27; 43(4): 2199–2215. Published online 2015 Jan 29. doi: 10.1093/nar/gku1377

PMCID:: PMC4344488

Abstract Article PDF–5.1M

Select item 427152717.

Phylostratigraphic Bias Creates Spurious Patterns of Genome Evolution

Bryan A. Moyers, Jianzhi Zhang

Mol Biol Evol. 2015 Jan 1; 32(1): 258–267. Published online 2014 Oct 13. doi: 10.1093/molbev/msu286

Correction in:: Mol Biol Evol. 2016 Nov; 33(11): 3031.

PMCID:: PMC4271527

Abstract Article PDF–618K

Select item 353067718.

High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression

Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras

Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112

PMCID:: PMC3530677

Abstract Article PDF–1.5M

Select item 346946719.

The Many Landscapes of Recombination in Drosophila melanogaster

Josep M. Comeron, Ramesh Ratnappan, Samuel Bailin

PLoS Genet. 2012 Oct; 8(10): e1002905. Published online 2012 Oct 11. doi: 10.1371/journal.pgen.1002905

PMCID:: PMC3469467

Abstract Article PDF–1.6M

Select item 343139820.

Expression of Human Paraoxonase 1 Decreases Superoxide Levels and Alters Bacterial Colonization in the Gut of Drosophila melanogaster

Alejandro A. Pezzulo, Emma E. Hornick, Michael V. Rector, Miriam Estin, Anna C. Reisetter, Peter J. Taft, Stephen C. Butcher, A. Brent Carter, J. Robert Manak, David A. Stoltz, Joseph Zabner

PLoS One. 2012; 7(8): e43777. Published online 2012 Aug 30. doi: 10.1371/journal.pone.0043777

PMCID:: PMC3431398

Abstract Article PDF–475K

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