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Select item 110631601.

Large-language models facilitate discovery of the molecular signatures regulating sleep and activity

Di Peng, Liubin Zheng, Dan Liu, Cheng Han, Xin Wang, Yan Yang, Li Song, Miaoying Zhao, Yanfeng Wei, Jiayi Li, Xiaoxue Ye, Yuxiang Wei, Zihao Feng, Xinhe Huang, Miaomiao Chen, Yujie Gou, Yu Xue, Luoying Zhang

Nat Commun. 2024; 15: 3685. Published online 2024 May 1. doi: 10.1038/s41467-024-48005-w

PMCID:: PMC11063160

Abstract Article PDF–2.7M

Select item 109457072.

Comparative interactome analysis of α-arrestin families in human and Drosophila

Kyung-Tae Lee, Inez KA Pranoto, Soon-Young Kim, Hee-Joo Choi, Ngoc Bao To, Hansong Chae, Jeong-Yeon Lee, Jung-Eun Kim, Young V Kwon, Jin-Wu Nam

eLife. 2024; 12: RP88328. Published online 2024 Jan 25. doi: 10.7554/eLife.88328

PMCID:: PMC10945707

Abstract Article PDF–2.8M

Select item 103988903.

A conserved STRIPAK complex is required for autophagy in muscle tissue

Yungui Guo, Qiling Zeng, David Brooks, Erika R. Geisbrecht

Mol Biol Cell. 2023 Aug 1; 34(9): ar91. Published online 2023 Aug 1. doi: 10.1091/mbc.E23-01-0006

PMCID:: PMC10398890

Abstract Article PDF–3.3M

Select item 95632674.

The Green Valley of Drosophila melanogaster Constitutive Heterochromatin: Protein-Coding Genes Involved in Cell Division Control

Giovanni Messina, Yuri Prozzillo, Greta Bizzochi, Renè Massimiliano Marsano, Patrizio Dimitri

Cells. 2022 Oct; 11(19): 3058. Published online 2022 Sep 29. doi: 10.3390/cells11193058

PMCID:: PMC9563267

Abstract Article PDF–1.2M

Select item 86644865.

Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes

Ana López-Varea, Patricia Vega-Cuesta, Ana Ruiz-Gómez, Cristina M Ostalé, Cristina Molnar, Covadonga F Hevia, Mercedes Martín, Maria F Organista, Jesus de Celis, Joaquín Culí, Nuria Esteban, Jose F de Celis

G3 (Bethesda) 2021 Dec; 11(12): jkab349. Published online 2021 Oct 2. doi: 10.1093/g3journal/jkab349

PMCID:: PMC8664486

Abstract Article PDF–3.1M

Select item 86452076.

In vivo proximity biotin ligation identifies the interactome of Egalitarian, a Dynein cargo adaptor

Frederick C. Baker, Hannah Neiswender, Rajalakshmi Veeranan-Karmegam, Graydon B. Gonsalvez

Development. 2021 Nov 15; 148(22): dev199935. Published online 2021 Nov 18. doi: 10.1242/dev.199935

PMCID:: PMC8645207

Abstract Article

Select item 83222987.

The Hippo pathway uses different machinery to control cell fate and organ size

Jonathan M. Pojer, Samuel A. Manning, Benjamin Kroeger, Shu Kondo, Kieran F. Harvey

iScience. 2021 Aug 20; 24(8): 102830. Published online 2021 Jul 9. doi: 10.1016/j.isci.2021.102830

PMCID:: PMC8322298

Abstract Article PDF–7.5M

Select item 78153138.

The Hippo pathway controls myofibril assembly and muscle fiber growth by regulating sarcomeric gene expression

Aynur Kaya-Çopur, Fabio Marchiano, Marco Y Hein, Daniel Alpern, Julie Russeil, Nuno Miguel Luis, Matthias Mann, Bart Deplancke, Bianca H Habermann, Frank Schnorrer

eLife. 2021; 10: e63726. Published online 2021 Jan 6. doi: 10.7554/eLife.63726

PMCID:: PMC7815313

Abstract Article PDF–18M

Select item 73680499.

Adaptation of gene loci to heterochromatin in the course of Drosophila evolution is associated with insulator proteins

Sergei Yu. Funikov, Alexander P. Rezvykh, Dina A. Kulikova, Elena S. Zelentsova, Lyudmila A. Protsenko, Lyubov N. Chuvakova, Venera I. Tyukmaeva, Irina R. Arkhipova, Michael B. Evgen’ev

Sci Rep. 2020; 10: 11893. Published online 2020 Jul 17. doi: 10.1038/s41598-020-68879-2

PMCID:: PMC7368049

Abstract Article PDF–8.8M

Select item 727233210.

STRIPAK–PP2A regulates Hippo-Yorkie signaling to suppress retinal fate in the Drosophila eye disc peripodial epithelium

Scott J. Neal, Qingxiang Zhou, Francesca Pignoni

J Cell Sci. 2020 May 15; 133(10): jcs237834. Published online 2020 May 26. doi: 10.1242/jcs.237834

PMCID:: PMC7272332

Abstract Article

Select item 696157811.

CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans

Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang

Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119

PMCID:: PMC6961578

Abstract Article PDF–3.6M

Select item 637440212.

Inactive Tlk associating with Tak1 increases p38 MAPK activity to prolong the G2 phase

Gwo-Jen Liaw, Chuen-Sheue Chiang

Sci Rep. 2019; 9: 1885. Published online 2019 Feb 13. doi: 10.1038/s41598-018-36137-1

PMCID:: PMC6374402

Abstract Article PDF–4.0M

Select item 631960813.

Time-resolved mapping of genetic interactions to model rewiring of signaling pathways

Florian Heigwer, Christian Scheeder, Thilo Miersch, Barbara Schmitt, Claudia Blass, Mischan Vali Pour Jamnani, Michael Boutros

eLife. 2018; 7: e40174. Published online 2018 Dec 28. doi: 10.7554/eLife.40174

PMCID:: PMC6319608

Abstract Article PDF–3.4M

Select item 574110314.

Homeostatic control of Hpo/MST kinase activity through autophosphorylation-dependent recruitment of the STRIPAK PP2A phosphatase complex

Yonggang Zheng, Bo Liu, Li Wang, Huiyan Lei, Katiuska Daniela Pulgar Prieto, Duojia Pan

Cell Rep. Author manuscript; available in PMC 2017 Dec 22.

Published in final edited form as: Cell Rep. 2017 Dec 19; 21(12): 3612–3623. doi: 10.1016/j.celrep.2017.11.076

PMCID:: PMC5741103

Abstract Article PDF–1015K

Select item 570780515.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 568900216.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 498142417.

Comparative Genomic Analyses Provide New Insights into the Evolutionary Dynamics of Heterochromatin in Drosophila

Ruggiero Caizzi, Roberta Moschetti, Lucia Piacentini, Laura Fanti, Renè Massimiliano Marsano, Patrizio Dimitri

PLoS Genet. 2016 Aug; 12(8): e1006212. Published online 2016 Aug 11. doi: 10.1371/journal.pgen.1006212

PMCID:: PMC4981424

Abstract Article PDF–6.5M

Select item 473800518.

Proteome-wide dataset supporting the study of ancient metazoan macromolecular complexes

Sadhna Phanse, Cuihong Wan, Blake Borgeson, Fan Tu, Kevin Drew, Greg Clark, Xuejian Xiong, Olga Kagan, Julian Kwan, Alexandr Bezginov, Kyle Chessman, Swati Pal, Graham Cromar, Ophelia Papoulas, Zuyao Ni, Daniel R. Boutz, Snejana Stoilova, Pierre C. Havugimana, Xinghua Guo, Ramy H. Malty, Mihail Sarov, Jack Greenblatt, Mohan Babu, W. Brent Derry, Elisabeth R. Tillier, John B. Wallingford, John Parkinson, Edward M. Marcotte, Andrew Emili

Data Brief. 2016 Mar; 6: 715–721. Published online 2015 Dec 12. doi: 10.1016/j.dib.2015.11.062

PMCID:: PMC4738005

Abstract Article PDF–205K

Select item 459299619.

SUMO-Enriched Proteome for Drosophila Innate Immune Response

Mithila Handu, Bhagyashree Kaduskar, Ramya Ravindranathan, Amarendranath Soory, Ritika Giri, Vijay Barathi Elango, Harsha Gowda, Girish S. Ratnaparkhi

G3 (Bethesda) 2015 Oct; 5(10): 2137–2154. Published online 2015 Aug 18. doi: 10.1534/g3.115.020958

PMCID:: PMC4592996

Abstract Article PDF–2.0M

Select item 452833020.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

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