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Select item 113305001.

Synergistic activation by Glass and Pointed promotes neuronal identity in the Drosophila eye disc

Hongsu Wang, Komal Kumar Bollepogu Raja, Kelvin Yeung, Carolyn A. Morrison, Antonia Terrizzano, Alireza Khodadadi-Jamayran, Phoenix Chen, Ashley Jordan, Cornelia Fritsch, Simon G. Sprecher, Graeme Mardon, Jessica E. Treisman

Nat Commun. 2024; 15: 7091. Published online 2024 Aug 17. doi: 10.1038/s41467-024-51429-z

PMCID:: PMC11330500

Abstract Article PDF–7.5M

Select item 111662872.

SAILoR: Structure-Aware Inference of Logic Rules

Žiga Pušnik, Miha Mraz, Nikolaj Zimic, Miha Moškon

PLoS One. 2024; 19(6): e0304102. Published online 2024 Jun 11. doi: 10.1371/journal.pone.0304102

PMCID:: PMC11166287

Abstract Article PDF–3.8M

Select item 110399933.

A circular RNA-gawky-chromatin regulatory axis modulates stress-induced transcription

Rui Su, Min Zhou, Jiamei Lin, Ge Shan, Chuan Huang

Nucleic Acids Res. 2024 Apr 24; 52(7): 3702–3721. Published online 2024 Feb 28. doi: 10.1093/nar/gkae157

PMCID:: PMC11039993

Abstract Article PDF–2.3M

Select item 109609904.

Transcription factor expression landscape in Drosophila embryonic cell lines

Robert A. Drewell, Daniel Klonaros, Jacqueline M. Dresch

BMC Genomics. 2024; 25: 307. Published online 2024 Mar 23. doi: 10.1186/s12864-024-10241-1

PMCID:: PMC10960990

Abstract Article PDF–4.0M

Select item 108477155.

Fourth Chromosome Resource Project: a comprehensive resource for genetic analysis in Drosophila that includes humanized stocks

Michael J Stinchfield, Brandon P Weasner, Bonnie M Weasner, David Zhitomersky, Justin P Kumar, Michael B O’Connor, Stuart J Newfeld

Genetics. 2024 Feb; 226(2): iyad201. Published online 2023 Nov 20. doi: 10.1093/genetics/iyad201

PMCID:: PMC10847715

Abstract Article PDF–1.2M

Select item 104388406.

Growth deregulation and interaction with host hemocytes contribute to tumor progression in a Drosophila brain tumor model

Chrysanthi Voutyraki, Alexandros Choromidis, Anastasia Meligkounaki, Nikolaos Andreas Vlachopoulos, Vasiliki Theodorou, Sofia Grammenoudi, Emmanouil Athanasiadis, Sara Monticelli, Angela Giangrande, Christos Delidakis, Evanthia Zacharioudaki

Proc Natl Acad Sci U S A. 2023 Aug 15; 120(33): e2221601120. Published online 2023 Aug 7. doi: 10.1073/pnas.2221601120

PMCID:: PMC10438840

Abstract Article PDF–4.3M

Select item 101057367.

Next-generation large-scale binary protein interaction network for Drosophila melanogaster

Hong-Wen Tang, Kerstin Spirohn, Yanhui Hu, Tong Hao, István A. Kovács, Yue Gao, Richard Binari, Donghui Yang-Zhou, Kenneth H. Wan, Joel S. Bader, Dawit Balcha, Wenting Bian, Benjamin W. Booth, Atina G. Coté, Steffi de Rouck, Alice Desbuleux, Kah Yong Goh, Dae-Kyum Kim, Jennifer J. Knapp, Wen Xing Lee, Irma Lemmens, Cathleen Li, Mian Li, Roujia Li, Hyobin Julianne Lim, Yifang Liu, Katja Luck, Dylan Markey, Carl Pollis, Sudharshan Rangarajan, Jonathan Rodiger, Sadie Schlabach, Yun Shen, Dayag Sheykhkarimli, Bridget TeeKing, Frederick P. Roth, Jan Tavernier, Michael A. Calderwood, David E. Hill, Susan E. Celniker, Marc Vidal, Norbert Perrimon, Stephanie E. Mohr

Nat Commun. 2023; 14: 2162. Published online 2023 Apr 15. doi: 10.1038/s41467-023-37876-0

PMCID:: PMC10105736

Abstract Article PDF–3.2M

Select item 86293958.

A large-scale transgenic RNAi screen identifies transcription factors that modulate myofiber size in Drosophila

Flavia A. Graca, Natalie Sheffield, Melissa Puppa, David Finkelstein, Liam C. Hunt, Fabio Demontis

PLoS Genet. 2021 Nov; 17(11): e1009926. Published online 2021 Nov 15. doi: 10.1371/journal.pgen.1009926

PMCID:: PMC8629395

Abstract Article PDF–2.3M

Select item 81392879.

The molecular landscape of neural differentiation in the developing Drosophila brain revealed by targeted scRNA-seq and multi-informatic analysis

Nigel S. Michki, Ye Li, Kayvon Sanjasaz, Yimeng Zhao, Fred Y. Shen, Logan A. Walker, Wenjia Cao, Cheng-Yu Lee, Dawen Cai

Cell Rep. Author manuscript; available in PMC 2021 May 21.

Published in final edited form as: Cell Rep. 2021 Apr 27; 35(4): 109039. doi: 10.1016/j.celrep.2021.109039

PMCID:: PMC8139287

Abstract Article PDF–1.6M

Select item 787014610.

Single-cell transcriptomes of developing and adult olfactory receptor neurons in Drosophila

Colleen N McLaughlin, Maria Brbić, Qijing Xie, Tongchao Li, Felix Horns, Sai Saroja Kolluru, Justus M Kebschull, David Vacek, Anthony Xie, Jiefu Li, Robert C Jones, Jure Leskovec, Stephen R Quake, Liqun Luo, Hongjie Li

eLife. 2021; 10: e63856. Published online 2021 Feb 8. doi: 10.7554/eLife.63856

PMCID:: PMC7870146

Abstract Article PDF–11M

Select item 787014511.

Temporal evolution of single-cell transcriptomes of Drosophila olfactory projection neurons

Qijing Xie, Maria Brbic, Felix Horns, Sai Saroja Kolluru, Robert C Jones, Jiefu Li, Anay R Reddy, Anthony Xie, Sayeh Kohani, Zhuoran Li, Colleen N McLaughlin, Tongchao Li, Chuanyun Xu, David Vacek, David J Luginbuhl, Jure Leskovec, Stephen R Quake, Liqun Luo, Hongjie Li

eLife. 2021; 10: e63450. Published online 2021 Jan 11. doi: 10.7554/eLife.63450

PMCID:: PMC7870145

Abstract Article PDF–13M

Select item 785159612.

Genomics of Recombination Rate Variation in Temperature-Evolved Drosophila melanogaster Populations

Ari Winbush, Nadia D Singh

Genome Biol Evol. 2021 Jan; 13(1): evaa252. Published online 2020 Nov 28. doi: 10.1093/gbe/evaa252

PMCID:: PMC7851596

Abstract Article PDF–778K

Select item 696157813.

CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans

Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang

Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119

PMCID:: PMC6961578

Abstract Article PDF–3.6M

Select item 653648414.

Molecular and genetic organization of bands and interbands in the dot chromosome of Drosophila melanogaster

Darya S. Sidorenko, Ivan A. Sidorenko, Tatyana Yu. Zykova, Fedor P. Goncharov, Jan Larsson, Igor F. Zhimulev

Chromosoma. 2019; 128(2): 97–117. Published online 2019 Apr 30. doi: 10.1007/s00412-019-00703-x

PMCID:: PMC6536484

Abstract Article PDF–8.1M

Select item 632589515.

Nuclear Transcriptomes of the Seven Neuronal Cell Types That Constitute the Drosophila Mushroom Bodies

Meng-Fu Maxwell Shih, Fred Pejman Davis, Gilbert Lee Henry, Josh Dubnau

G3 (Bethesda) 2019 Jan; 9(1): 81–94. Published online 2018 Nov 5. doi: 10.1534/g3.118.200726

PMCID:: PMC6325895

Abstract Article PDF–2.0M

Select item 617725716.

Generation of a versatile BiFC ORFeome library for analyzing protein–protein interactions in live Drosophila

Johannes Bischof, Marilyne Duffraisse, Edy Furger, Leiore Ajuria, Guillaume Giraud, Solene Vanderperre, Rachel Paul, Mikael Björklund, Damien Ahr, Alexis W Ahmed, Lionel Spinelli, Christine Brun, Konrad Basler, Samir Merabet

eLife. 2018; 7: e38853. Published online 2018 Sep 24. doi: 10.7554/eLife.38853

PMCID:: PMC6177257

Abstract Article PDF–4.9M

Select item 608693517.

A Single-Cell Transcriptome Atlas of the Aging Drosophila Brain

Kristofer Davie, Jasper Janssens, Duygu Koldere, Maxime De Waegeneer, Uli Pech, Łukasz Kreft, Sara Aibar, Samira Makhzami, Valerie Christiaens, Carmen Bravo González-Blas, Suresh Poovathingal, Gert Hulselmans, Katina I. Spanier, Thomas Moerman, Bram Vanspauwen, Sarah Geurs, Thierry Voet, Jeroen Lammertyn, Bernard Thienpont, Sha Liu, Nikos Konstantinides, Mark Fiers, Patrik Verstreken, Stein Aerts

Cell. 2018 Aug 9; 174(4): 982–998.e20. doi: 10.1016/j.cell.2018.05.057

PMCID:: PMC6086935

Abstract Article

Select item 600407218.

A length-dependent evolutionarily conserved pathway controls nuclear export of circular RNAs

Chuan Huang, Dongming Liang, Deirdre C. Tatomer, Jeremy E. Wilusz

Genes Dev. 2018 May 1; 32(9-10): 639–644. doi: 10.1101/gad.314856.118

PMCID:: PMC6004072

Abstract Article PDF–678K

Select item 590644919.

The impact of genome variation and diet on the metabolic phenotype and microbiome composition of Drosophila melanogaster

Lisa Jehrke, Fiona A. Stewart, Andrea Droste, Mathias Beller

Sci Rep. 2018; 8: 6215. Published online 2018 Apr 18. doi: 10.1038/s41598-018-24542-5

PMCID:: PMC5906449

Abstract Article PDF–4.5M

Select item 570780520.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

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