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Items: 1 to 20 of 33

1.
Twenty-seven ZAD-ZNF genes of Drosophila melanogaster are orthologous to the embryo polarity determining mosquito gene cucoid
Muzi Li, Koray Kasan, Zinnia Saha, Yoseop Yoon, Urs Schmidt-Ott
PLoS One. 2023; 18(1): e0274716. Published online 2023 Jan 3. doi: 10.1371/journal.pone.0274716
PMCID:
PMC9810180
AbstractArticlePDF–2.7M
2.
Updates on ion and water transport by the Malpighian tubule
Julian A T Dow, Sue Ann Krause, Pawel Herzyk
Curr Opin Insect Sci. 2021 Oct; 47: 31–37. doi: 10.1016/j.cois.2021.02.018
PMCID:
PMC9586879
AbstractArticle
3.
Transcriptional Regulators of Ecdysteroid Biosynthetic Enzymes and Their Roles in Insect Development
Takumi Kamiyama, Ryusuke Niwa
Front Physiol. 2022; 13: 823418. Published online 2022 Feb 8. doi: 10.3389/fphys.2022.823418
PMCID:
PMC8863297
AbstractArticlePDF–1.4M
4.
An RNA-interference screen in Drosophila to identify ZAD-containing C2H2 zinc finger genes that function in female germ cells
Laura Shapiro-Kulnane, Oscar Bautista, Helen K Salz
G3 (Bethesda) 2021 Jan; 11(1): jkaa016. Published online 2020 Dec 7. doi: 10.1093/g3journal/jkaa016
PMCID:
PMC8022714
AbstractArticlePDF–578K
5.
Structural basis of diversity and homodimerization specificity of zinc-finger-associated domains in Drosophila
Artem Bonchuk, Konstantin Boyko, Anna Fedotova, Alena Nikolaeva, Sofya Lushchekina, Anastasia Khrustaleva, Vladimir Popov, Pavel Georgiev
Nucleic Acids Res. 2021 Feb 26; 49(4): 2375–2389. Published online 2021 Feb 8. doi: 10.1093/nar/gkab061
PMCID:
PMC7913770
AbstractArticlePDF–4.0M
6.
Innovation of heterochromatin functions drives rapid evolution of essential ZAD-ZNF genes in Drosophila
Bhavatharini Kasinathan, Serafin U Colmenares, III, Hannah McConnell, Janet M Young, Gary H Karpen, Harmit S Malik
eLife. 2020; 9: e63368. Published online 2020 Nov 10. doi: 10.7554/eLife.63368
PMCID:
PMC7655104
AbstractArticlePDF–1.7M
7.
Generation of a versatile BiFC ORFeome library for analyzing protein–protein interactions in live Drosophila
Johannes Bischof, Marilyne Duffraisse, Edy Furger, Leiore Ajuria, Guillaume Giraud, Solene Vanderperre, Rachel Paul, Mikael Björklund, Damien Ahr, Alexis W Ahmed, Lionel Spinelli, Christine Brun, Konrad Basler, Samir Merabet
eLife. 2018; 7: e38853. Published online 2018 Sep 24. doi: 10.7554/eLife.38853
PMCID:
PMC6177257
AbstractArticlePDF–4.9M
8.
Cooperative Control of Ecdysone Biosynthesis in Drosophila by Transcription Factors Séance, Ouija Board, and Molting Defective
Outa Uryu, Qiuxiang Ou, Tatsuya Komura-Kawa, Takumi Kamiyama, Masatoshi Iga, Monika Syrzycka, Keiko Hirota, Hiroshi Kataoka, Barry M. Honda, Kirst King-Jones, Ryusuke Niwa
Genetics. 2018 Feb; 208(2): 605–622. Published online 2017 Nov 29. doi: 10.1534/genetics.117.300268
PMCID:
PMC5788525
AbstractArticlePDF–1.9M
9.
Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species
Piero Sanfilippo, Jiayu Wen, Eric C. Lai
Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0
PMCID:
PMC5707805
AbstractArticlePDF–3.2M
10.
Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster
Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira
RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117
PMCID:
PMC5689002
AbstractArticlePDF–4.0M
11.
The Insect Prothoracic Gland as a Model for Steroid Hormone Biosynthesis and Regulation
Qiuxiang Ou, Jie Zeng, Naoki Yamanaka, Christina Brakken-Thal, Michael B. O’Connor, Kirst King-Jones
Cell Rep. Author manuscript; available in PMC 2017 Mar 2.
Published in final edited form as: Cell Rep. 2016 Jun 28; 16(1): 247–262. Published online 2016 Jun 16. doi: 10.1016/j.celrep.2016.05.053
PMCID:
PMC5333552
AbstractArticlePDF–2.7M
12.
ZAD-Domain Is Essential for Nuclear Localization of Insulator Proteins in Drosophila melanogaster
N.A. Zolotarev, O.G. Maksimenko, P.G. Georgiev, A.N. Bonchuk
Acta Naturae. 2016 Jul-Sep; 8(3): 97–102.
PMCID:
PMC5081699
AbstractArticlePDF–605K
13.
Ouija board: A transcription factor evolved for only one target in steroid hormone biosynthesis in the fruit fly Drosophila melanogaster
Yuko S. Niwa, Ryusuke Niwa
Transcription. 2016; 7(5): 196–202. Published online 2016 Jul 19. doi: 10.1080/21541264.2016.1210370
PMCID:
PMC5066509
AbstractArticlePDF–613K
14.
mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster
Gildas Lepennetier, Francesco Catania
G3 (Bethesda) 2016 Jun; 6(6): 1617–1626. Published online 2016 Mar 28. doi: 10.1534/g3.116.029231
PMCID:
PMC4889658
AbstractArticlePDF–1.5M
15.
The Drosophila Zinc Finger Transcription Factor Ouija Board Controls Ecdysteroid Biosynthesis through Specific Regulation of spookier
Tatsuya Komura-Kawa, Keiko Hirota, Yuko Shimada-Niwa, Rieko Yamauchi, MaryJane Shimell, Tetsuro Shinoda, Akiyoshi Fukamizu, Michael B. O’Connor, Ryusuke Niwa
PLoS Genet. 2015 Dec; 11(12): e1005712. Published online 2015 Dec 10. doi: 10.1371/journal.pgen.1005712
PMCID:
PMC4684333
AbstractArticlePDF–3.8M
16.
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders
Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937
PMCID:
PMC4528330
AbstractArticlePDF–2.2M
17.
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data
Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929
PMCID:
PMC4528329
AbstractArticlePDF–4.9M
18.
A large-scale, in vivo transcription factor screen defines bivalent chromatin as a key property of regulatory factors mediating Drosophila wing development
Claus Schertel, Monica Albarca, Claudia Rockel-Bauer, Nicholas W. Kelley, Johannes Bischof, Korneel Hens, Erik van Nimwegen, Konrad Basler, Bart Deplancke
Genome Res. 2015 Apr; 25(4): 514–523. doi: 10.1101/gr.181305.114
PMCID:
PMC4381523
AbstractArticlePDF–700K
19.
The Release 6 reference sequence of the Drosophila melanogaster genome
Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker
Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114
PMCID:
PMC4352887
AbstractArticlePDF–1022K
20.
Phylostratigraphic Bias Creates Spurious Patterns of Genome Evolution
Bryan A. Moyers, Jianzhi Zhang
Mol Biol Evol. 2015 Jan 1; 32(1): 258–267. Published online 2014 Oct 13. doi: 10.1093/molbev/msu286
Correction in:
Mol Biol Evol. 2016 Nov; 33(11): 3031.
PMCID:
PMC4271527
AbstractArticlePDF–618K

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