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Select item 114575181.

Evolutionarily conserved roles of foxg1a in the developing subpallium of zebrafish embryos

Koto Umeda, Kaiho Tanaka, Gazlima Chowdhury, Kouhei Nasu, Yuri Kuroyanagi, Kyo Yamasu

Dev Growth Differ. 2024 Apr; 66(3): 219–234. Published online 2024 Feb 20. doi: 10.1111/dgd.12917

PMCID:: PMC11457518

Abstract Article PDF–3.5M

Select item 102502022.

EmbryoNet: using deep learning to link embryonic phenotypes to signaling pathways

Daniel Čapek, Matvey Safroshkin, Hernán Morales-Navarrete, Nikan Toulany, Grigory Arutyunov, Anica Kurzbach, Johanna Bihler, Julia Hagauer, Sebastian Kick, Felicity Jones, Ben Jordan, Patrick Müller

Nat Methods. 2023; 20(6): 815–823. Published online 2023 May 8. doi: 10.1038/s41592-023-01873-4

PMCID:: PMC10250202

Abstract Article PDF–13M

Select item 92582313.

Neuropathy-associated Fars2 deficiency affects neuronal development and potentiates neuronal apoptosis by impairing mitochondrial function

Xihui Chen, Fangfang Liu, Bowen Li, Yufeng Wang, Lijuan Yuan, Anan Yin, Qi Chen, Weihong Hu, Yan Yao, Mengjie Zhang, YuanMing Wu, Kun Chen

Cell Biosci. 2022; 12: 103. Published online 2022 Jul 6. doi: 10.1186/s13578-022-00838-y

PMCID:: PMC9258231

Abstract Article PDF–12M

Select item 91645094.

Claudin-5a is essential for the functional formation of both zebrafish blood-brain barrier and blood-cerebrospinal fluid barrier

Yanyu Li, Chunchun Wang, Liang Zhang, Bing Chen, Yuqian Mo, Jingjing Zhang

Fluids Barriers CNS. 2022; 19: 40. Published online 2022 Jun 3. doi: 10.1186/s12987-022-00337-9

PMCID:: PMC9164509

Abstract Article PDF–22M

Select item 90736745.

Hnrnpul1 controls transcription, splicing, and modulates skeletal and limb development in vivo

Danielle L Blackwell, Sherri D Fraser, Oana Caluseriu, Claudia Vivori, Amanda V Tyndall, Ryan E Lamont, Jillian S Parboosingh, A Micheil Innes, François P Bernier, Sarah J Childs

G3 (Bethesda) 2022 May; 12(5): jkac067. Published online 2022 Mar 23. doi: 10.1093/g3journal/jkac067

PMCID:: PMC9073674

Abstract Article PDF–3.3M

Select item 86305746.

Identification of ACTA2 as a Key Contributor to Venous Malformation

Song Wang, Zifu Zhou, Jing Li, Yu Wang, Hongwen Li, Renrong Lv, Guangqi Xu, Jian Zhang, Jianhai Bi, Ran Huo

Front Cell Dev Biol. 2021; 9: 755409. Published online 2021 Nov 8. doi: 10.3389/fcell.2021.755409

PMCID:: PMC8630574

Abstract Article PDF–14M

Select item 80499857.

Mutations in KIF7 Implicated in Idiopathic Scoliosis in Humans and Axial Curvatures in Zebrafish

Elizabeth A. Terhune, Melissa T. Cuevas, Anna M. Monley, Cambria I. Wethey, Xiaomi Chen, Maria V. Cattel, Melisa N. Bayrak, Morgan R. Bland, Brittan Sutphin, G. Devon Trahan, Matthew R.G. Taylor, Lee A. Niswander, Kenneth L. Jones, Erin E. Baschal, Lilian Antunes, Matthew Dobbs, Christina Gurnett, Bruce Appel, Ryan Gray, Nancy Hadley Miller

Hum Mutat. Author manuscript; available in PMC 2022 Apr 1.

Published in final edited form as: Hum Mutat. 2020 Dec 31 : 10.1002/humu.24162. Published online 2020 Dec 31. doi: 10.1002/humu.24162

PMCID:: PMC8049985

Abstract Article PDF–1.3M

Select item 77698828.

Hedgehog Signaling Regulates Neurogenesis in the Larval and Adult Zebrafish Hypothalamus

Ira Male, A. Tuba Ozacar, Rita R. Fagan, Matthew D. Loring, Meng-Chieh Shen, Veronica A. Pace, Christine A. Devine, Grace E. Lawson, Alyssa Lutservitz, Rolf O. Karlstrom

eNeuro. 2020 Nov-Dec; 7(6): ENEURO.0226-20.2020. Prepublished online 2020 Oct 26. Published online 2020 Dec 18. doi: 10.1523/ENEURO.0226-20.2020

PMCID:: PMC7769882

Abstract Article PDF–10M

Select item 74751649.

The Joubert Syndrome Gene arl13b is Critical for Early Cerebellar Development in Zebrafish

Jian Zhu, Han-Tsing Wang, Yu-Rong Chen, Ling-Ya Yan, Ying-Ying Han, Ling-Yan Liu, Ying Cao, Zhi-Zhi Liu, Hong A. Xu

Neurosci Bull. 2020 Sep; 36(9): 1023–1034. Published online 2020 Aug 18. doi: 10.1007/s12264-020-00554-y

PMCID:: PMC7475164

Abstract Article PDF–6.7M

Select item 681343110.

Expression of Protein-Coding Gene Orthologs in Zebrafish and Mouse Inner Ear Non-sensory Supporting Cells

Kimberlee P. Giffen, Huizhan Liu, Kenneth L. Kramer, David Z. He

Front Neurosci. 2019; 13: 1117. Published online 2019 Oct 18. doi: 10.3389/fnins.2019.01117

PMCID:: PMC6813431

Abstract Article PDF–8.5M

Select item 673359411.

Notch signalling maintains Hedgehog responsiveness via a Gli-dependent mechanism during spinal cord patterning in zebrafish

Craig T Jacobs, Peng Huang

eLife. 2019; 8: e49252. Published online 2019 Aug 27. doi: 10.7554/eLife.49252

PMCID:: PMC6733594

Abstract Article PDF–6.7M

Select item 594671612.

let-7 MicroRNA-Mediated Regulation of Shh Signaling and the Gene Regulatory Network Is Essential for Retina Regeneration

Simran Kaur, Shivangi Gupta, Mansi Chaudhary, Mohammad Anwar Khursheed, Soumitra Mitra, Akshai Janardhana Kurup, Rajesh Ramachandran

Cell Rep. 2018 May 1; 23(5): 1409–1423. Published online 2018 May 2. doi: 10.1016/j.celrep.2018.04.002

PMCID:: PMC5946716

Abstract Article PDF–7.3M

Select item 487073213.

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database

Jeremy Pasquier, Cédric Cabau, Thaovi Nguyen, Elodie Jouanno, Dany Severac, Ingo Braasch, Laurent Journot, Pierre Pontarotti, Christophe Klopp, John H. Postlethwait, Yann Guiguen, Julien Bobe

BMC Genomics. 2016; 17: 368. Published online 2016 May 18. doi: 10.1186/s12864-016-2709-z

PMCID:: PMC4870732

Abstract Article PDF–1.8M

Select item 470299514.

Molecular mechanisms underlying the exceptional adaptations of batoid fins

Tetsuya Nakamura, Jeff Klomp, Joyce Pieretti, Igor Schneider, Andrew R. Gehrke, Neil H. Shubin

Proc Natl Acad Sci U S A. 2015 Dec 29; 112(52): 15940–15945. Published online 2015 Dec 7. doi: 10.1073/pnas.1521818112

PMCID:: PMC4702995

Abstract Article PDF–1.3M

Select item 463413715.

RFX transcription factors are essential for hearing in mice

Ran Elkon, Beatrice Milon, Laura Morrison, Manan Shah, Sarath Vijayakumar, Manoj Racherla, Carmen C. Leitch, Lorna Silipino, Shadan Hadi, Michèle Weiss-Gayet, Emmanuèle Barras, Christoph D. Schmid, Aouatef Ait-Lounis, Ashley Barnes, Yang Song, David J. Eisenman, Efrat Eliyahu, Gregory I. Frolenkov, Scott E. Strome, Bénédicte Durand, Norann A. Zaghloul, Sherri M. Jones, Walter Reith, Ronna Hertzano

Nat Commun. 2015; 6: 8549. Published online 2015 Oct 15. doi: 10.1038/ncomms9549

PMCID:: PMC4634137

Abstract Article PDF–5.5M

Select item 462747916.

Deubiquitination of Ci/Gli by Usp7/HAUSP regulates Hedgehog Signaling

Zizhang Zhou, Xia Yao, Shuang Li, Yue Xiong, Xiaohua Dong, Yun Zhao, Jin Jiang, Qing Zhang

Dev Cell. Author manuscript; available in PMC 2016 Jul 6.

Published in final edited form as: Dev Cell. 2015 Jul 6; 34(1): 58–72. Published online 2015 Jun 25. doi: 10.1016/j.devcel.2015.05.016

PMCID:: PMC4627479

Abstract Article PDF–1.3M

Select item 433950917.

Sox4 regulates choroid fissure closure by limiting Hedgehog signaling during ocular morphogenesis

Wen Wen, Lakshmi Pillai-Kastoori, Stephen G. Wilson, Ann C. Morris

Dev Biol. Author manuscript; available in PMC 2016 Mar 1.

Published in final edited form as: Dev Biol. 2015 Mar 1; 399(1): 139–153. Published online 2014 Dec 31. doi: 10.1016/j.ydbio.2014.12.026

PMCID:: PMC4339509

Abstract Article PDF–2.7M

Select item 417775218.

Nipbl and Mediator Cooperatively Regulate Gene Expression to Control Limb Development

Akihiko Muto, Shingo Ikeda, Martha E. Lopez-Burks, Yutaka Kikuchi, Anne L. Calof, Arthur D. Lander, Thomas F. Schilling

PLoS Genet. 2014 Sep; 10(9): e1004671. Published online 2014 Sep 25. doi: 10.1371/journal.pgen.1004671

PMCID:: PMC4177752

Abstract Article PDF–2.1M

Select item 409178619.

Sox11 Is Required to Maintain Proper Levels of Hedgehog Signaling during Vertebrate Ocular Morphogenesis

Lakshmi Pillai-Kastoori, Wen Wen, Stephen G. Wilson, Erin Strachan, Adriana Lo-Castro, Marco Fichera, Sebastiano A. Musumeci, Ordan J. Lehmann, Ann C. Morris

PLoS Genet. 2014 Jul; 10(7): e1004491. Published online 2014 Jul 10. doi: 10.1371/journal.pgen.1004491

PMCID:: PMC4091786

Abstract Article PDF–8.8M

Select item 391843020.

Eye-Specific Gene Expression following Embryonic Ethanol Exposure in Zebrafish: Roles for Heat Shock Factor 1

Bhavani Kashyap, Laurel Pegorsch, Ruth A. Frey, Chi Sun, Eric A. Shelden, Deborah L. Stenkamp

Reprod Toxicol. Author manuscript; available in PMC 2015 Jan 1.

Published in final edited form as: Reprod Toxicol. 2014 Jan; 43: 111–124. Published online 2013 Dec 16. doi: 10.1016/j.reprotox.2013.12.002

PMCID:: PMC3918430

Abstract Article PDF–3.2M

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