PMC Links for GEO Profiles (Select 34982747) - PMC

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Items: 16

Select item 93569901.

Rbbp4 loss disrupts neural progenitor cell cycle regulation independent of Rb and leads to Tp53 acetylation and apoptosis

Laura E. Schultz‐Rogers, Michelle L. Thayer, Sekhar Kambakam, Wesley A. Wierson, Jordan A. Helmer, Mark D. Wishman, Kristen A. Wall, Jessica L. Greig, Jaimie L. Forsman, Kavya Puchhalapalli, Siddharth Nair, Trevor J. Weiss, Jon M. Luiken, Patrick R. Blackburn, Stephen C. Ekker, Marcel Kool, Maura McGrail

Dev Dyn. 2022 Aug; 251(8): 1267–1290. Published online 2022 Mar 18. doi: 10.1002/dvdy.467

PMCID:: PMC9356990

Abstract Article PDF–38M

Select item 92700272.

Cre/lox regulated conditional rescue and inactivation with zebrafish UFlip alleles generated by CRISPR-Cas9 targeted integration

Fang Liu, Sekhar Kambakam, Maira P Almeida, Zhitao Ming, Jordan M Welker, Wesley A Wierson, Laura E Schultz-Rogers, Stephen C Ekker, Karl J Clark, Jeffrey J Essner, Maura McGrail

eLife. 2022; 11: e71478. Published online 2022 Jun 17. doi: 10.7554/eLife.71478

PMCID:: PMC9270027

Abstract Article PDF–23M

Select item 85609543.

Nuclear S-nitrosylation impacts tissue regeneration in zebrafish

Gianfranco Matrone, Sung Yun Jung, Jong Min Choi, Antrix Jain, Hon-Chiu Eastwood Leung, Kimal Rajapakshe, Cristian Coarfa, Julie Rodor, Martin A. Denvir, Andrew H. Baker, John P. Cooke

Nat Commun. 2021; 12: 6282. Published online 2021 Nov 1. doi: 10.1038/s41467-021-26621-0

PMCID:: PMC8560954

Abstract Article PDF–2.6M

Select item 60373824.

Gene expression profile of a selection of Polycomb Group genes during zebrafish embryonic and germ line development

Naomi D. Chrispijn, Karolina M. Andralojc, Charlotte Castenmiller, Leonie M. Kamminga

PLoS One. 2018; 13(7): e0200316. Published online 2018 Jul 9. doi: 10.1371/journal.pone.0200316

PMCID:: PMC6037382

Abstract Article PDF–22M

Select item 60313595.

Epigenetic regulators Rbbp4 and Hdac1 are overexpressed in a zebrafish model of RB1 embryonal brain tumor, and are required for neural progenitor survival and proliferation

Laura E. Schultz, Jeffrey A. Haltom, Maira P. Almeida, Wesley A. Wierson, Staci L. Solin, Trevor J. Weiss, Jordan A. Helmer, Elizabeth J. Sandquist, Heather R. Shive, Maura McGrail

Dis Model Mech. 2018 Jun 1; 11(6): dmm034124. Published online 2018 Jun 15. doi: 10.1242/dmm.034124

PMCID:: PMC6031359

Abstract Article

Select item 57584936.

Evolutionary and Expression Analyses Show Co-option of khdrbs Genes for Origin of Vertebrate Brain

Su Wang, Qingyun Yang, Ziyue Wang, Shuoqi Feng, Hongyan Li, Dongrui Ji, Shicui Zhang

Front Genet. 2017; 8: 225. Published online 2018 Jan 4. doi: 10.3389/fgene.2017.00225

PMCID:: PMC5758493

Abstract Article PDF–7.0M

Select item 56505287.

Bmp Signaling Governs Biliary-Driven Liver Regeneration in Zebrafish via Tbx2b and Id2a

Tae-Young Choi, Mehwish Khaliq, Shinya Tsurusaki, Nikolay Ninov, Didier Y.R. Stainier, Minoru Tanaka, Donghun Shin

Hepatology. Author manuscript; available in PMC 2018 Nov 1.

Published in final edited form as: Hepatology. 2017 Nov; 66(5): 1616–1630. Published online 2017 Sep 29. doi: 10.1002/hep.29309

PMCID:: PMC5650528

Abstract Article PDF–2.4M

Select item 53379748.

Evolution of complexity in the zebrafish synapse proteome

Àlex Bayés, Mark O. Collins, Rita Reig-Viader, Gemma Gou, David Goulding, Abril Izquierdo, Jyoti S. Choudhary, Richard D. Emes, Seth G. N. Grant

Nat Commun. 2017; 8: 14613. Published online 2017 Mar 2. doi: 10.1038/ncomms14613

PMCID:: PMC5337974

Abstract Article PDF–2.0M

Select item 47697719.

Epigenetic Studies Point to DNA Replication/Repair Genes as a Basis for the Heritable Nature of Long Term Complications in Diabetes

Alexey A. Leontovich, Robert V. Intine, Michael P. Sarras, Jr.

J Diabetes Res. 2016; 2016: 2860780. Published online 2016 Feb 14. doi: 10.1155/2016/2860780

PMCID:: PMC4769771

Abstract Article PDF–1.9M

Select item 463413710.

RFX transcription factors are essential for hearing in mice

Ran Elkon, Beatrice Milon, Laura Morrison, Manan Shah, Sarath Vijayakumar, Manoj Racherla, Carmen C. Leitch, Lorna Silipino, Shadan Hadi, Michèle Weiss-Gayet, Emmanuèle Barras, Christoph D. Schmid, Aouatef Ait-Lounis, Ashley Barnes, Yang Song, David J. Eisenman, Efrat Eliyahu, Gregory I. Frolenkov, Scott E. Strome, Bénédicte Durand, Norann A. Zaghloul, Sherri M. Jones, Walter Reith, Ronna Hertzano

Nat Commun. 2015; 6: 8549. Published online 2015 Oct 15. doi: 10.1038/ncomms9549

PMCID:: PMC4634137

Abstract Article PDF–5.5M

Select item 403885111.

Specific NuRD components are required for fin regeneration in zebrafish

Catherine Pfefferli, Fritz Müller, Anna Jaźwińska, Chantal Wicky

BMC Biol. 2014; 12: 30. Published online 2014 Apr 29. doi: 10.1186/1741-7007-12-30

PMCID:: PMC4038851

Abstract Article PDF–1.7M

Select item 395995212.

A Network of Epigenetic Regulators Guide Developmental Hematopoiesis In Vivo

Hsuan-Ting Huang, Katie L. Kathrein, Abby Barton, Zachary Gitlin, Yue-Hua Huang, Thomas P. Ward, Oliver Hofmann, Anthony Dibiase, Anhua Song, Svitlana Tyekucheva, Winston Hide, Yi Zhou, Leonard I. Zon

Nat Cell Biol. Author manuscript; available in PMC 2014 Jun 1.

Published in final edited form as: Nat Cell Biol. 2013 Dec; 15(12): 1516–1525. Published online 2013 Nov 17. doi: 10.1038/ncb2870

PMCID:: PMC3959952

Abstract Article PDF–1.8M

Select item 317805913.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 119954614.

The zebrafish gene map defines ancestral vertebrate chromosomes

Ian G. Woods, Catherine Wilson, Brian Friedlander, Patricia Chang, Daengnoy K. Reyes, Rebecca Nix, Peter D. Kelly, Felicia Chu, John H. Postlethwait, William S. Talbot

Genome Res. 2005 Sep; 15(9): 1307–1314. doi: 10.1101/gr.4134305

PMCID:: PMC1199546

Abstract Article PDF–595K

Select item 52895915.

Hematopoietic gene expression profile in zebrafish kidney marrow

Huai-Dong Song, Xiao-Jian Sun, Min Deng, Guo-Wei Zhang, Yi Zhou, Xin-Yan Wu, Yan Sheng, Yi Chen, Zheng Ruan, Chun-Lei Jiang, Hui-Yong Fan, Leonard I. Zon, John P. Kanki, Ting Xi Liu, A. Thomas Look, Zhu Chen

Proc Natl Acad Sci U S A. 2004 Nov 16; 101(46): 16240–16245. Published online 2004 Nov 1. doi: 10.1073/pnas.0407241101