PMC Links for GEO Profiles (Select 34973134) - PMC

Select item 66093951.

An evolutionary approach to recover genes predominantly expressed in the testes of the zebrafish, chicken and mouse

Sophie Fouchécourt, Floriane Picolo, Sébastien Elis, Charlotte Lécureuil, Aurore Thélie, Marina Govoroun, Mégane Brégeon, Pascal Papillier, Jean-Jacques Lareyre, Philippe Monget

BMC Evol Biol. 2019; 19: 137. Published online 2019 Jul 3. doi: 10.1186/s12862-019-1462-8

PMCID:: PMC6609395

Abstract Article PDF–1.9M

Select item 57341062.

Oncogenic Role of THOR, a Conserved Cancer/Testis Long Noncoding RNA

Yasuyuki Hosono, Yashar S Niknafs, John R Prensner, Matthew K Iyer, Saravana M Dhanasekaran, Rohit Mehra, Sethuramasundaram Pitchiaya, Jean Tien, June Escara-Wilke, Anton Poliakov, Shih-Chun Chu, Sahal Saleh, Keerthana Sankar, Fengyun Su, Shuling Guo, Yuanyuan Qiao, Susan M Freier, Huynh-Hoa Bui, Xuhong Cao, Rohit Malik, Timothy M Johnson, David G Beer, Felix Y Feng, Weibin Zhou, Arul M Chinnaiyan

Cell. Author manuscript; available in PMC 2018 Dec 14.

Published in final edited form as: Cell. 2017 Dec 14; 171(7): 1559–1572.e20. doi: 10.1016/j.cell.2017.11.040

Correction in:: Cell. 2023 Sep 14; 186(19): 4254–4255.

PMCID:: PMC5734106

Abstract Article PDF–1.4M

Select item 53379743.

Evolution of complexity in the zebrafish synapse proteome

Àlex Bayés, Mark O. Collins, Rita Reig-Viader, Gemma Gou, David Goulding, Abril Izquierdo, Jyoti S. Choudhary, Richard D. Emes, Seth G. N. Grant

Nat Commun. 2017; 8: 14613. Published online 2017 Mar 2. doi: 10.1038/ncomms14613

PMCID:: PMC5337974

Abstract Article PDF–2.0M

Select item 49373154.

Poly(A)-binding proteins are required for microRNA-mediated silencing and to promote target deadenylation in C. elegans

Mathieu N. Flamand, Edlyn Wu, Ajay Vashisht, Guillaume Jannot, Brett D. Keiper, Martin J. Simard, James Wohlschlegel, Thomas F. Duchaine

Nucleic Acids Res. 2016 Jul 8; 44(12): 5924–5935. Published online 2016 Apr 19. doi: 10.1093/nar/gkw276

PMCID:: PMC4937315

Abstract Article PDF–725K

Select item 48707325.

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database

Jeremy Pasquier, Cédric Cabau, Thaovi Nguyen, Elodie Jouanno, Dany Severac, Ingo Braasch, Laurent Journot, Pierre Pontarotti, Christophe Klopp, John H. Postlethwait, Yann Guiguen, Julien Bobe

BMC Genomics. 2016; 17: 368. Published online 2016 May 18. doi: 10.1186/s12864-016-2709-z

PMCID:: PMC4870732

Abstract Article PDF–1.8M

Select item 46341376.

RFX transcription factors are essential for hearing in mice

Ran Elkon, Beatrice Milon, Laura Morrison, Manan Shah, Sarath Vijayakumar, Manoj Racherla, Carmen C. Leitch, Lorna Silipino, Shadan Hadi, Michèle Weiss-Gayet, Emmanuèle Barras, Christoph D. Schmid, Aouatef Ait-Lounis, Ashley Barnes, Yang Song, David J. Eisenman, Efrat Eliyahu, Gregory I. Frolenkov, Scott E. Strome, Bénédicte Durand, Norann A. Zaghloul, Sherri M. Jones, Walter Reith, Ronna Hertzano

Nat Commun. 2015; 6: 8549. Published online 2015 Oct 15. doi: 10.1038/ncomms9549

PMCID:: PMC4634137

Abstract Article PDF–5.5M

Select item 39796797.

New Classes of Mind Bomb-Interacting Proteins Identified from Yeast Two-Hybrid Screens

Li-Chuan Tseng, Chengjin Zhang, Chun-Mei Cheng, Haoying Xu, Chia-Hao Hsu, Yun-Jin Jiang

PLoS One. 2014; 9(4): e93394. Published online 2014 Apr 8. doi: 10.1371/journal.pone.0093394

PMCID:: PMC3979679

Abstract Article PDF–839K

Select item 32683088.

Translational inhibition by deadenylation-independent mechanisms is central to microRNA-mediated silencing in zebrafish

Yuichiro Mishima, Akira Fukao, Tomoyoshi Kishimoto, Hiroshi Sakamoto, Toshinobu Fujiwara, Kunio Inoue

Proc Natl Acad Sci U S A. 2012 Jan 24; 109(4): 1104-1109. Published online 2012 Jan 9. doi: 10.1073/pnas.1113350109

PMCID:: PMC3268308

Abstract Article PDF–849K

Select item 31780599.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 316259610.

Comparative Transcriptome Analyses Indicate Molecular Homology of Zebrafish Swimbladder and Mammalian Lung

Weiling Zheng, Zhengyuan Wang, John E. Collins, Robert M. Andrews, Derek Stemple, Zhiyuan Gong

PLoS One. 2011; 6(8): e24019. Published online 2011 Aug 26. doi: 10.1371/journal.pone.0024019

PMCID:: PMC3162596

Abstract Article PDF–1.1M

Select item 309847911.

RNA-Seq analysis in mutant zebrafish reveals role of U1C protein in alternative splicing regulation

Tanja Dorothe Rösel, Lee-Hsueh Hung, Jan Medenbach, Katrin Donde, Stefan Starke, Vladimir Benes, Gunnar Rätsch, Albrecht Bindereif

EMBO J. 2011 May 18; 30(10): 1965–1976. Published online 2011 Apr 5. doi: 10.1038/emboj.2011.106

PMCID:: PMC3098479

Abstract Article PDF–1.4M

Select item 283928112.

Pigmentation Pathway Evolution after Whole-Genome Duplication in Fish

Ingo Braasch, Frédéric Brunet, Jean-Nicolas Volff, Manfred Schartl

Genome Biol Evol. 2009; 1: 479–493. Published online 2009 Nov 25. doi: 10.1093/gbe/evp050

PMCID:: PMC2839281

Abstract Article PDF–808K

Select item 277132713.

A Drug-Sensitized Zebrafish Screen Identifies Multiple Genes, Including GINS3, as Regulators of Myocardial Repolarization

David J. Milan, Albert M. Kim, Jeffrey R. Winterfield, Ian L. Jones, Arne Pfeufer, Serena Sanna, Dan E. Arking, Adam H. Amsterdam, Khaled M. Sabeh, John D. Mably, David S. Rosenbaum, Randall T. Peterson, Aravinda Chakravarti, Stefan Kääb, Dan M. Roden, Calum A. MacRae

Circulation. Author manuscript; available in PMC 2010 Aug 18.

Published in final edited form as: Circulation. 2009 Aug 18; 120(7): 553–559. Published online 2009 Aug 3. doi: 10.1161/CIRCULATIONAHA.108.821082

PMCID:: PMC2771327

Abstract Article PDF–468K

Select item 272018414.

Evolution of gene function and regulatory control after whole-genome duplication: Comparative analyses in vertebrates

Karin S. Kassahn, Vinh T. Dang, Simon J. Wilkins, Andrew C. Perkins, Mark A. Ragan

Genome Res. 2009 Aug; 19(8): 1404–1418. doi: 10.1101/gr.086827.108

PMCID:: PMC2720184

Abstract Article PDF–1010K

Select item 51647415.

Identification of 315 genes essential for early zebrafish development

Adam Amsterdam, Robert M. Nissen, Zhaoxia Sun, Eric C. Swindell, Sarah Farrington, Nancy Hopkins

Proc Natl Acad Sci U S A. 2004 Aug 31; 101(35): 12792–12797. Published online 2004 Jul 15. doi: 10.1073/pnas.0403929101

PMCID:: PMC516474

Abstract Article PDF–692K

Select item 13924116.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

Mammalian Gene Collection (MGC) Program Team

Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899

PMCID:: PMC139241

Abstract Article PDF–118K

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