PMC Links for GEO Profiles (Select 33730478) - PMC

Aladin Haimovici, Christoph Höfer, Mohamed Tarek Badr, Elham Bavafaye Haghighi, Tarek Amer, Melanie Boerries, Peter Bronsert, Ievgen Glavynskyi, Deborah Fanfone, Gabriel Ichim, Nico Thilmany, Arnim Weber, Tilman Brummer, Corinna Spohr, Rupert Öllinger, Klaus-Peter Janssen, Roland Rad, Georg Häcker

Cell Death Dis. 2022 Apr; 13(4): 315. Published online 2022 Apr 7. doi: 10.1038/s41419-022-04768-y

PMCID:: PMC8990075

Abstract Article PDF–4.6M

Select item 88970224.

Histone deacetylase inhibitors inhibit cervical cancer growth through Parkin acetylation-mediated mitophagy

Xin Sun, Yuhan Shu, Guiqin Ye, Caixia Wu, Mengting Xu, Ruilan Gao, Dongsheng Huang, Jianbin Zhang

Acta Pharm Sin B. 2022 Feb; 12(2): 838–852. Published online 2021 Jul 21. doi: 10.1016/j.apsb.2021.07.003

PMCID:: PMC8897022

Abstract Article PDF–3.0M

Select item 81650305.

Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome

Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2022 May 27.

Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011

PMCID:: PMC8165030

Abstract Article PDF–2.2M

Select item 71699836.

A reference map of the human binary protein interactome

Katja Luck, Dae-Kyum Kim, Luke Lambourne, Kerstin Spirohn, Bridget E. Begg, Wenting Bian, Ruth Brignall, Tiziana Cafarelli, Francisco J. Campos-Laborie, Benoit Charloteaux, Dongsic Choi, Atina G. Coté, Meaghan Daley, Steven Deimling, Alice Desbuleux, Amélie Dricot, Marinella Gebbia, Madeleine F. Hardy, Nishka Kishore, Jennifer J. Knapp, István A. Kovács, Irma Lemmens, Miles W. Mee, Joseph C. Mellor, Carl Pollis, Carles Pons, Aaron D. Richardson, Sadie Schlabach, Bridget Teeking, Anupama Yadav, Mariana Babor, Dawit Balcha, Omer Basha, Christian Bowman-Colin, Suet-Feung Chin, Soon Gang Choi, Claudia Colabella, Georges Coppin, Cassandra D’Amata, David De Ridder, Steffi De Rouck, Miquel Duran-Frigola, Hanane Ennajdaoui, Florian Goebels, Liana Goehring, Anjali Gopal, Ghazal Haddad, Elodie Hatchi, Mohamed Helmy, Yves Jacob, Yoseph Kassa, Serena Landini, Roujia Li, Natascha van Lieshout, Andrew MacWilliams, Dylan Markey, Joseph N. Paulson, Sudharshan Rangarajan, John Rasla, Ashyad Rayhan, Thomas Rolland, Adriana San-Miguel, Yun Shen, Dayag Sheykhkarimli, Gloria M. Sheynkman, Eyal Simonovsky, Murat Taşan, Alexander Tejeda, Vincent Tropepe, Jean-Claude Twizere, Yang Wang, Robert J. Weatheritt, Jochen Weile, Yu Xia, Xinping Yang, Esti Yeger-Lotem, Quan Zhong, Patrick Aloy, Gary D. Bader, Javier De Las Rivas, Suzanne Gaudet, Tong Hao, Janusz Rak, Jan Tavernier, David E. Hill, Marc Vidal, Frederick P. Roth, Michael A. Calderwood

Nature. Author manuscript; available in PMC 2020 Oct 8.

Published in final edited form as: Nature. 2020 Apr; 580(7803): 402–408. Published online 2020 Apr 8. doi: 10.1038/s41586-020-2188-x

PMCID:: PMC7169983

Abstract Article PDF–5.4M

Select item 61666827.

Histone Interaction Landscapes Visualized by Crosslinking Mass Spectrometry in Intact Cell Nuclei

Domenico Fasci, Hugo van Ingen, Richard A. Scheltema, Albert J. R. Heck

Mol Cell Proteomics. 2018 Oct; 17(10): 2018–2033. Published online 2018 Jul 18. doi: 10.1074/mcp.RA118.000924

PMCID:: PMC6166682

Abstract Article PDF–3.8M

Select item 56805768.

Executioner caspases and CAD are essential for mutagenesis induced by TRAIL or vincristine

Mark A Miles, Christine J Hawkins

Cell Death Dis. 2017 Oct; 8(10): e3062. Published online 2017 Oct 5. doi: 10.1038/cddis.2017.454

PMCID:: PMC5680576

Abstract Article PDF–3.7M

Select item 55316119.

Architecture of the human interactome defines protein communities and disease networks

Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper

Nature. Author manuscript; available in PMC 2017 Nov 17.

Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366

PMCID:: PMC5531611

Abstract Article PDF–2.7M

Select item 549522510.

Genome-wide CRISPR screen identifies HNRNPL as a prostate cancer dependency regulating RNA splicing

Teng Fei, Yiwen Chen, Tengfei Xiao, Wei Li, Laura Cato, Peng Zhang, Maura B. Cotter, Michaela Bowden, Rosina T. Lis, Shuang G. Zhao, Qiu Wu, Felix Y. Feng, Massimo Loda, Housheng Hansen He, X. Shirley Liu, Myles Brown

Proc Natl Acad Sci U S A. 2017 Jun 27; 114(26): E5207–E5215. Published online 2017 Jun 13. doi: 10.1073/pnas.1617467114

PMCID:: PMC5495225

Abstract Article PDF–1.3M

Select item 521596811.

Sensitization of breast cancer cells to doxorubicin via stable cell line generation and overexpression of DFF40

Fatemeh Bagheri, Shahrokh Safarian, Mohamadreza Baghaban Eslaminejad, Nader Sheibani

Biochem Cell Biol. Author manuscript; available in PMC 2017 Jan 6.

Published in final edited form as: Biochem Cell Biol. 2015 Dec; 93(6): 604–610. Published online 2015 Sep 15. doi: 10.1139/bcb-2015-0007

PMCID:: PMC5215968

Abstract Article PDF–1.0M

Select item 521039712.

Loss of Caspase‐Activated DNase Protects Against Atherosclerosis in Apolipoprotein E–Deficient Mice

Meng‐Lin Chao, Junhong Guo, Wen‐Lin Cheng, Xue‐Yong Zhu, Zhi‐Gang She, Zan Huang, Yong Ji, Hongliang Li

J Am Heart Assoc. 2016 Dec; 5(12): e004362. Published online 2016 Dec 22. doi: 10.1161/JAHA.116.004362

PMCID:: PMC5210397

Abstract Article PDF–4.8M

Select item 520979613.

Stable overexpression of DNA fragmentation factor in T-47D cells: sensitization of breast cancer cells to apoptosis in response to acetazolamide and sulfabenzamide

Fatemeh Bagheri, Shahrokh Safarian, Mohamadreza Baghaban Eslaminejad, Nader Sheibani

Mol Biol Rep. Author manuscript; available in PMC 2017 Jan 4.

Published in final edited form as: Mol Biol Rep. 2014 Nov; 41(11): 7387–7394. Published online 2014 Aug 3. doi: 10.1007/s11033-014-3626-3

PMCID:: PMC5209796

Abstract Article PDF–942K

Select item 489654214.

An intrinsic DFF40/CAD endonuclease deficiency impairs oligonucleosomal DNA hydrolysis during caspase-dependent cell death: a common trait in human glioblastoma cells

María Sánchez-Osuna, Laura Martínez-Escardó, Carla Granados-Colomina, Fina Martínez-Soler, Sònia Pascual-Guiral, Victoria Iglesias-Guimarais, Roser Velasco, Gerard Plans, Noemi Vidal, Avelina Tortosa, Carlos Barcia, Jordi Bruna, Victor J. Yuste

Neuro Oncol. 2016 Jul; 18(7): 950–961. Published online 2016 Jan 10. doi: 10.1093/neuonc/nov315

PMCID:: PMC4896542

Abstract Article PDF–1.0M

Select item 484160715.

High-throughput analyses of hnRNP H1 dissects its multi-functional aspect

Philip J. Uren, Emad Bahrami-Samani, Patricia Rosa de Araujo, Christine Vogel, Mei Qiao, Suzanne C. Burns, Andrew D. Smith, Luiz O. F. Penalva

RNA Biol. 2016 Apr; 13(4): 400–411. Published online 2016 Jan 13. doi: 10.1080/15476286.2015.1138030

PMCID:: PMC4841607

Abstract Article PDF–1.6M

Select item 461721116.

The BioPlex Network: A Systematic Exploration of the Human Interactome

Edward L. Huttlin, Lily Ting, Raphael J. Bruckner, Fana Gebreab, Melanie P. Gygi, John Szpyt, Stanley Tam, Gabriela Zarraga, Greg Colby, Kurt Baltier, Rui Dong, Virginia Guarani, Laura Pontano Vaites, Alban Ordureau, Ramin Rad, Brian K. Erickson, Martin Wühr, Joel Chick, Bo Zhai, Deepak Kolippakkam, Julian Mintseris, Robert A. Obar, Tim Harris, Spyros Artavanis-Tsakonas, Mathew E. Sowa, Pietro DeCamilli, Joao A. Paulo, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2016 Jul 16.

Published in final edited form as: Cell. 2015 Jul 16; 162(2): 425–440. doi: 10.1016/j.cell.2015.06.043

PMCID:: PMC4617211

Abstract Article PDF–2.2M

Select item 450026917.

Engineered cellular gene-replacement platform for selective and inducible proteolytic profiling

Charles W. Morgan, Juan E. Diaz, Samantha G. Zeitlin, Daniel C. Gray, James A. Wells

Proc Natl Acad Sci U S A. 2015 Jul 7; 112(27): 8344–8349. Published online 2015 Jun 23. doi: 10.1073/pnas.1504141112

PMCID:: PMC4500269

Abstract Article PDF–1.9M

Select item 408191918.

Caspase-activated DNase Is Necessary and Sufficient for Oligonucleosomal DNA Breakdown, but Not for Chromatin Disassembly during Caspase-dependent Apoptosis of LN-18 Glioblastoma Cells

María Sánchez-Osuna, Mercè Garcia-Belinchón, Victoria Iglesias-Guimarais, Estel Gil-Guiñón, Elisenda Casanelles, Victor J. Yuste

J Biol Chem. 2014 Jul 4; 289(27): 18752–18769. Published online 2014 May 17. doi: 10.1074/jbc.M114.550020

PMCID:: PMC4081919

Abstract Article PDF–9.5M

Select item 376617819.

Genome-wide association study identifies loci affecting blood copper, selenium and zinc

David M. Evans, Gu Zhu, Veronica Dy, Andrew C. Heath, Pamela A. F. Madden, John P. Kemp, George McMahon, Beate St Pourcain, Nicholas J. Timpson, Jean Golding, Debbie A. Lawlor, Colin Steer, Grant W. Montgomery, Nicholas G. Martin, George Davey Smith, John B. Whitfield

Hum Mol Genet. 2013 Oct 1; 22(19): 3998–4006. Published online 2013 May 29. doi: 10.1093/hmg/ddt239

PMCID:: PMC3766178

Abstract Article PDF–714K

Select item 361099220.

Chromatin Collapse during Caspase-dependent Apoptotic Cell Death Requires DNA Fragmentation Factor, 40-kDa Subunit-/Caspase-activated Deoxyribonuclease-mediated 3′-OH Single-strand DNA Breaks

Victoria Iglesias-Guimarais, Estel Gil-Guiñon, María Sánchez-Osuna, Elisenda Casanelles, Mercè García-Belinchón, Joan X. Comella, Victor J. Yuste

J Biol Chem. 2013 Mar 29; 288(13): 9200–9215. Published online 2013 Feb 21. doi: 10.1074/jbc.M112.411371

PMCID:: PMC3610992

Abstract Article PDF–3.5M

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