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Select item 105031901.

Amyloid fibril proteomics of AD brains reveals modifiers of aggregation and toxicity

Arun Upadhyay, Deepak Chhangani, Nalini R. Rao, Julia Kofler, Robert Vassar, Diego E. Rincon-Limas, Jeffrey N. Savas

Mol Neurodegener. 2023; 18: 61. Published online 2023 Sep 14. doi: 10.1186/s13024-023-00654-z

PMCID:: PMC10503190

Abstract Article PDF–8.6M

Select item 87017482.

Guillaume Bordet, Niraj Lodhi, Andrew Kossenkov, Alexei Tulin

Genes (Basel) 2021 Dec; 12(12): 1982. Published online 2021 Dec 14. doi: 10.3390/genes12121982

PMCID:: PMC8701748

Abstract Article PDF–2.3M

Select item 79283613.

The Roles of the LIM Domain Proteins in Drosophila Cardiac and Hematopoietic Morphogenesis

Meihua She, Min Tang, Tingting Jiang, Qun Zeng

Front Cardiovasc Med. 2021; 8: 616851. Published online 2021 Feb 11. doi: 10.3389/fcvm.2021.616851

PMCID:: PMC7928361

Abstract Article PDF–846K

Select item 75262264.

Integrated analysis of the aging brain transcriptome and proteome in tauopathy

Carl Grant Mangleburg, Timothy Wu, Hari K. Yalamanchili, Caiwei Guo, Yi-Chen Hsieh, Duc M. Duong, Eric B. Dammer, Philip L. De Jager, Nicholas T. Seyfried, Zhandong Liu, Joshua M. Shulman

Mol Neurodegener. 2020; 15: 56. Published online 2020 Sep 29. doi: 10.1186/s13024-020-00405-4

PMCID:: PMC7526226

Abstract Article PDF–1.4M

Select item 73492865.

Genetic Control of Muscle Diversification and Homeostasis: Insights from Drosophila

Preethi Poovathumkadavil, Krzysztof Jagla

Cells. 2020 Jun; 9(6): 1543. Published online 2020 Jun 25. doi: 10.3390/cells9061543

PMCID:: PMC7349286

Abstract Article PDF–4.0M

Select item 71760956.

Drosophila NUAK functions with Starvin/BAG3 in autophagic protein turnover

David Brooks, Fawwaz Naeem, Marta Stetsiv, Samantha C. Goetting, Simranjot Bawa, Nicole Green, Cheryl Clark, Arash Bashirullah, Erika R. Geisbrecht

PLoS Genet. 2020 Apr; 16(4): e1008700. Published online 2020 Apr 22. doi: 10.1371/journal.pgen.1008700

PMCID:: PMC7176095

Abstract Article PDF–6.9M

Select item 69615787.

CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans

Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang

Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119

PMCID:: PMC6961578

Abstract Article PDF–3.6M

Select item 60786048.

Human R1441C LRRK2 regulates the synaptic vesicle proteome and phosphoproteome in a Drosophila model of Parkinson’s disease

Md Shariful Islam, Hendrik Nolte, Wright Jacob, Anna B. Ziegler, Stefanie Pütz, Yael Grosjean, Karolina Szczepanowska, Aleksandra Trifunovic, Thomas Braun, Hermann Heumann, Rolf Heumann, Bernhard Hovemann, Darren J. Moore, Marcus Krüger

Hum Mol Genet. 2016 Dec 15; 25(24): 5365–5382. Published online 2016 Oct 29. doi: 10.1093/hmg/ddw352

PMCID:: PMC6078604

Abstract Article PDF–1.9M

Select item 60755399.

LRRK2(I2020T) functional genetic interactors that modify eye degeneration and dopaminergic cell loss in Drosophila

Paul C. Marcogliese, Sameera Abuaish, Ghassan Kabbach, Elizabeth Abdel-Messih, Sarah Seang, Gang Li, Ruth S. Slack, M. Emdadul Haque, Katerina Venderova, David S. Park

Hum Mol Genet. 2017 Apr 1; 26(7): 1247–1257. Published online 2017 Feb 2. doi: 10.1093/hmg/ddx030

PMCID:: PMC6075539

Abstract Article PDF–1.7M

Select item 570780510.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 568900211.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 480554512.

A genome-wide resource for the analysis of protein localisation in Drosophila

Mihail Sarov, Christiane Barz, Helena Jambor, Marco Y Hein, Christopher Schmied, Dana Suchold, Bettina Stender, Stephan Janosch, Vinay Vikas KJ, RT Krishnan, Aishwarya Krishnamoorthy, Irene RS Ferreira, Radoslaw K Ejsmont, Katja Finkl, Susanne Hasse, Philipp Kämpfer, Nicole Plewka, Elisabeth Vinis, Siegfried Schloissnig, Elisabeth Knust, Volker Hartenstein, Matthias Mann, Mani Ramaswami, K VijayRaghavan, Pavel Tomancak, Frank Schnorrer

eLife. 2016; 5: e12068. Published online 2016 Feb 20. doi: 10.7554/eLife.12068

PMCID:: PMC4805545

Abstract Article PDF–9.1M

Select item 473800513.

Proteome-wide dataset supporting the study of ancient metazoan macromolecular complexes

Sadhna Phanse, Cuihong Wan, Blake Borgeson, Fan Tu, Kevin Drew, Greg Clark, Xuejian Xiong, Olga Kagan, Julian Kwan, Alexandr Bezginov, Kyle Chessman, Swati Pal, Graham Cromar, Ophelia Papoulas, Zuyao Ni, Daniel R. Boutz, Snejana Stoilova, Pierre C. Havugimana, Xinghua Guo, Ramy H. Malty, Mihail Sarov, Jack Greenblatt, Mohan Babu, W. Brent Derry, Elisabeth R. Tillier, John B. Wallingford, John Parkinson, Edward M. Marcotte, Andrew Emili

Data Brief. 2016 Mar; 6: 715–721. Published online 2015 Dec 12. doi: 10.1016/j.dib.2015.11.062

PMCID:: PMC4738005

Abstract Article PDF–205K

Select item 452833014.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 452832915.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929

PMCID:: PMC4528329

Abstract Article PDF–4.9M

Select item 440366716.

Transcription Factor Networks in Drosophila melanogaster

David Y. Rhee, Dong-Yeon Cho, Bo Zhai, Matthew Slattery, Lijia Ma, Julian Mintseris, Christina Y. Wong, Kevin P. White, Susan E. Celniker, Teresa M. Przytycka, Steven P. Gygi, Robert A. Obar, Spyros Artavanis-Tsakonas

Cell Rep. Author manuscript; available in PMC 2015 Apr 20.

Published in final edited form as: Cell Rep. 2014 Sep 25; 8(6): 2031–2043. Published online 2014 Sep 18. doi: 10.1016/j.celrep.2014.08.038

PMCID:: PMC4403667

Abstract Article PDF–1.3M

Select item 435288717.

The Release 6 reference sequence of the Drosophila melanogaster genome

Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker

Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114

PMCID:: PMC4352887

Abstract Article PDF–1022K

Select item 432874518.

The RNA-binding protein Arrest (Bruno) regulates alternative splicing to enable myofibril maturation in Drosophila flight muscle

Maria L Spletter, Christiane Barz, Assa Yeroslaviz, Cornelia Schönbauer, Irene R S Ferreira, Mihail Sarov, Daniel Gerlach, Alexander Stark, Bianca H Habermann, Frank Schnorrer

EMBO Rep. 2015 Feb; 16(2): 178–191. Published online 2014 Dec 22. doi: 10.15252/embr.201439791

PMCID:: PMC4328745

Abstract Article PDF–4.8M

Select item 427152719.

Phylostratigraphic Bias Creates Spurious Patterns of Genome Evolution

Bryan A. Moyers, Jianzhi Zhang

Mol Biol Evol. 2015 Jan 1; 32(1): 258–267. Published online 2014 Oct 13. doi: 10.1093/molbev/msu286

Correction in:: Mol Biol Evol. 2016 Nov; 33(11): 3031.

PMCID:: PMC4271527

Abstract Article PDF–618K

Select item 371684920.

Drosophila melanogaster Muscle LIM Protein and α-actinin function together to stabilize muscle cytoarchitecture: a potential role for Mlp84B in actin-crosslinking

Kathleen A. Clark, Julie L. Kadrmas

Cytoskeleton (Hoboken) Author manuscript; available in PMC 2014 Jun 1.

Published in final edited form as: Cytoskeleton (Hoboken). 2013 Jun; 70(6): 304–316. Published online 2013 Apr 18. doi: 10.1002/cm.21106

PMCID:: PMC3716849

Abstract Article PDF–4.0M

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