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Select item 97134311.

Transcriptome analysis of FOXO-dependent hypoxia gene expression identifies Hipk as a regulator of low oxygen tolerance in Drosophila

Kate Ding, Elizabeth C Barretto, Michael Johnston, Byoungchun Lee, Marco Gallo, Savraj S Grewal

G3 (Bethesda) 2022 Dec; 12(12): jkac263. Published online 2022 Oct 6. doi: 10.1093/g3journal/jkac263

PMCID:: PMC9713431

Abstract Article PDF–1.0M

Select item 90946672.

IDH2-mediated regulation of the biogenesis of the oxidative phosphorylation system

Anjaneyulu Murari, Naga S. V. Goparaju, Shauna-Kay Rhooms, Kaniz F. B. Hossain, Felix G. Liang, Christian J. Garcia, Cindy Osei, Tong Liu, Hong Li, Richard N. Kitsis, Rajesh Patel, Edward Owusu-Ansah

Sci Adv. 2022 May; 8(19): eabl8716. Published online 2022 May 11. doi: 10.1126/sciadv.abl8716

PMCID:: PMC9094667

Abstract Article PDF–21M

Select item 88648423.

Evolutionary adaptation of the Polycomb repressive complex 2

Sabrina Fischer, Lisa Marie Weber, Robert Liefke

Epigenetics Chromatin. 2022; 15: 7. Published online 2022 Feb 22. doi: 10.1186/s13072-022-00439-6

PMCID:: PMC8864842

Abstract Article PDF–3.2M

Select item 74381134.

Differentiating Drosophila female germ cells initiate Polycomb silencing by regulating PRC2-interacting proteins

Steven Z DeLuca, Megha Ghildiyal, Liang-Yu Pang, Allan C Spradling

eLife. 2020; 9: e56922. Published online 2020 Aug 10. doi: 10.7554/eLife.56922

PMCID:: PMC7438113

Abstract Article PDF–8.5M

Select item 69615785.

CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans

Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang

Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119

PMCID:: PMC6961578

Abstract Article PDF–3.6M

Select item 67818976.

Genetic Signatures of Drug Response Variability in Drosophila melanogaster

Palle Duun Rohde, Iben Ravnborg Jensen, Pernille Merete Sarup, Michael Ørsted, Ditte Demontis, Peter Sørensen, Torsten Nygaard Kristensen

Genetics. 2019 Oct; 213(2): 633–650. Published online 2019 Aug 27. doi: 10.1534/genetics.119.302381

PMCID:: PMC6781897

Abstract Article PDF–1.4M

Select item 62831207.

WD40 Repeats Arrange Histone Tails for Spreading of Silencing

Tamaki Suganuma, Jerry L. Workman

J Mol Cell Biol. 2010 Apr; 2(2): 81–83. Published online 2009 Dec 11. doi: 10.1093/jmcb/mjp046

PMCID:: PMC6283120

Abstract Article PDF–83K

Select item 57420688.

Hidden genetic variation shapes the structure of functional elements in Drosophila

Mahul Chakraborty, Nicholas W. VanKuren, Roy Zhao, Xinwen Zhang, Shannon Kalsow, J. J. Emerson

Nat Genet. 2018; 50(1): 20–25. Published online 2017 Dec 18. doi: 10.1038/s41588-017-0010-y

PMCID:: PMC5742068

Abstract Article PDF–2.2M

Select item 57376979.

Changes in Neuronal Signaling and Cell Stress Response Pathways are Associated with a Multigenic Response of Drosophila melanogaster to DDT Selection

Keon Mook Seong, Brad S Coates, Weilin Sun, John M Clark, Barry R Pittendrigh

Genome Biol Evol. 2017 Dec; 9(12): 3356–3372. Published online 2017 Dec 1. doi: 10.1093/gbe/evx252

PMCID:: PMC5737697

Abstract Article PDF–927K

Select item 572985510.

Gene Expression as a Dosimeter in Irradiated Drosophila melanogaster

Samana Shrestha, Adam Vanasse, Leon N Cooper, Michael P. Antosh

J Comput Biol. 2017 Dec 1; 24(12): 1265–1274. Published online 2017 Dec 1. doi: 10.1089/cmb.2017.0170

PMCID:: PMC5729855

Abstract Article PDF–203K

Select item 570780511.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 568900212.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 559905113.

Molecular population genetics of the Polycomb genes in Drosophila subobscura

Juan M. Calvo-Martín, Montserrat Papaceit, Carmen Segarra

PLoS One. 2017; 12(9): e0185005. Published online 2017 Sep 14. doi: 10.1371/journal.pone.0185005

PMCID:: PMC5599051

Abstract Article PDF–8.3M

Select item 556078214.

Polycomb and Trithorax Group Genes in Drosophila

Judith A. Kassis, James A. Kennison, John W. Tamkun

Genetics. 2017 Aug; 206(4): 1699–1725. Published online 2017 Aug 3. doi: 10.1534/genetics.115.185116

PMCID:: PMC5560782

Abstract Article PDF–1.4M

Select item 498752315.

Early programming of the oocyte epigenome temporally controls late prophase I transcription and chromatin remodelling

Paulo Navarro-Costa, Alicia McCarthy, Pedro Prudêncio, Christina Greer, Leonardo G. Guilgur, Jörg D. Becker, Julie Secombe, Prashanth Rangan, Rui G. Martinho

Nat Commun. 2016; 7: 12331. Published online 2016 Aug 10. doi: 10.1038/ncomms12331

PMCID:: PMC4987523

Abstract Article PDF–3.1M

Select item 494283816.

The Nucleosome Remodeling and Deacetylase Complex NuRD Is Built from Preformed Catalytically Active Sub-modules

W. Zhang, A. Aubert, J.M. Gomez de Segura, M. Karuppasamy, S. Basu, A.S. Murthy, A. Diamante, T.A. Drury, J. Balmer, J. Cramard, A.A. Watson, D. Lando, S.F. Lee, M. Palayret, S.L. Kloet, A.H. Smits, M.J. Deery, M. Vermeulen, B. Hendrich, D. Klenerman, C. Schaffitzel, I. Berger, E.D. Laue

J Mol Biol. 2016 Jul 17; 428(14): 2931–2942. doi: 10.1016/j.jmb.2016.04.025

PMCID:: PMC4942838

Abstract Article PDF–1.1M

Select item 480689017.

Adaptive selection and coevolution at the proteins of the Polycomb repressive complexes in Drosophila

J M Calvo-Martín, P Librado, M Aguadé, M Papaceit, C Segarra

Heredity (Edinb) 2016 Feb; 116(2): 213–223. Published online 2015 Oct 21. doi: 10.1038/hdy.2015.91

PMCID:: PMC4806890

Abstract Article PDF–2.0M

Select item 457069718.

Putative synaptic genes defined from a Drosophila whole body developmental transcriptome by a machine learning approach

Flavio Pazos Obregón, Cecilia Papalardo, Sebastián Castro, Gustavo Guerberoff, Rafael Cantera

BMC Genomics. 2015; 16(1): 694. Published online 2015 Sep 15. doi: 10.1186/s12864-015-1888-3

PMCID:: PMC4570697

Abstract Article PDF–2.0M

Select item 452833019.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 452832920.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929