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Select item 106711091.

Multiple Roles of dXNP and dADD1—Drosophila Orthologs of ATRX Chromatin Remodeler

Larisa Melnikova, Anton Golovnin

Int J Mol Sci. 2023 Nov; 24(22): 16486. Published online 2023 Nov 18. doi: 10.3390/ijms242216486

PMCID:: PMC10671109

Abstract Article PDF–2.5M

Select item 101057362.

Next-generation large-scale binary protein interaction network for Drosophila melanogaster

Hong-Wen Tang, Kerstin Spirohn, Yanhui Hu, Tong Hao, István A. Kovács, Yue Gao, Richard Binari, Donghui Yang-Zhou, Kenneth H. Wan, Joel S. Bader, Dawit Balcha, Wenting Bian, Benjamin W. Booth, Atina G. Coté, Steffi de Rouck, Alice Desbuleux, Kah Yong Goh, Dae-Kyum Kim, Jennifer J. Knapp, Wen Xing Lee, Irma Lemmens, Cathleen Li, Mian Li, Roujia Li, Hyobin Julianne Lim, Yifang Liu, Katja Luck, Dylan Markey, Carl Pollis, Sudharshan Rangarajan, Jonathan Rodiger, Sadie Schlabach, Yun Shen, Dayag Sheykhkarimli, Bridget TeeKing, Frederick P. Roth, Jan Tavernier, Michael A. Calderwood, David E. Hill, Susan E. Celniker, Marc Vidal, Norbert Perrimon, Stephanie E. Mohr

Nat Commun. 2023; 14: 2162. Published online 2023 Apr 15. doi: 10.1038/s41467-023-37876-0

PMCID:: PMC10105736

Abstract Article PDF–3.2M

Select item 95357983.

Lint‐O cooperates with L(3)mbt in target gene suppression to maintain homeostasis in fly ovary and brain

Hitomi Yamamoto‐Matsuda, Keita Miyoshi, Mai Moritoh, Hikari Yoshitane, Yoshitaka Fukada, Kuniaki Saito, Soichiro Yamanaka, Mikiko C Siomi

EMBO Rep. 2022 Oct; 23(10): e53813. Published online 2022 Aug 22. doi: 10.15252/embr.202153813

PMCID:: PMC9535798

Abstract Article PDF–1.4M

Select item 91063024.

Essential role of Cp190 in physical and regulatory boundary formation

Anjali Kaushal, Julien Dorier, Bihan Wang, Giriram Mohana, Michael Taschner, Pascal Cousin, Patrice Waridel, Christian Iseli, Anastasiia Semenova, Simon Restrepo, Nicolas Guex, Erez Lieberman Aiden, Maria Cristina Gambetta

Sci Adv. 2022 May; 8(19): eabl8834. Published online 2022 May 13. doi: 10.1126/sciadv.abl8834

PMCID:: PMC9106302

Abstract Article PDF–8.3M

Select item 85574565.

Defective Satellite DNA Clustering into Chromocenters Underlies Hybrid Incompatibility in Drosophila

Madhav Jagannathan, Yukiko M Yamashita

Mol Biol Evol. 2021 Nov; 38(11): 4977–4986. Published online 2021 Jul 24. doi: 10.1093/molbev/msab221

PMCID:: PMC8557456

Abstract Article PDF–894K

Select item 84123526.

The Integrity of the HMR complex is necessary for centromeric binding and reproductive isolation in Drosophila

Andrea Lukacs, Andreas W. Thomae, Peter Krueger, Tamas Schauer, Anuroop V. Venkatasubramani, Natalia Y. Kochanova, Wasim Aftab, Rupam Choudhury, Ignasi Forne, Axel Imhof

PLoS Genet. 2021 Aug; 17(8): e1009744. Published online 2021 Aug 23. doi: 10.1371/journal.pgen.1009744

PMCID:: PMC8412352

Abstract Article PDF–3.0M

Select item 72147467.

Functional Significance of Satellite DNAs: Insights From Drosophila

Aleksei S. Shatskikh, Alexei A. Kotov, Vladimir E. Adashev, Sergei S. Bazylev, Ludmila V. Olenina

Front Cell Dev Biol. 2020; 8: 312. Published online 2020 May 5. doi: 10.3389/fcell.2020.00312

PMCID:: PMC7214746

Abstract Article PDF–1.3M

Select item 71926268.

A multi-layered structure of the interphase chromocenter revealed by proximity-based biotinylation

Natalia Y Kochanova, Tamas Schauer, Grusha Primal Mathias, Andrea Lukacs, Andreas Schmidt, Andrew Flatley, Aloys Schepers, Andreas W Thomae, Axel Imhof

Nucleic Acids Res. 2020 May 7; 48(8): 4161–4178. Published online 2020 Mar 17. doi: 10.1093/nar/gkaa145

PMCID:: PMC7192626

Abstract Article PDF–4.4M

Select item 63823509.

The modular mechanism of chromocenter formation in Drosophila

Madhav Jagannathan, Ryan Cummings, Yukiko M Yamashita

eLife. 2019; 8: e43938. Published online 2019 Feb 11. doi: 10.7554/eLife.43938

PMCID:: PMC6382350

Abstract Article PDF–5.6M

Select item 607860410.

Human R1441C LRRK2 regulates the synaptic vesicle proteome and phosphoproteome in a Drosophila model of Parkinson’s disease

Md Shariful Islam, Hendrik Nolte, Wright Jacob, Anna B. Ziegler, Stefanie Pütz, Yael Grosjean, Karolina Szczepanowska, Aleksandra Trifunovic, Thomas Braun, Hermann Heumann, Rolf Heumann, Bernhard Hovemann, Darren J. Moore, Marcus Krüger

Hum Mol Genet. 2016 Dec 15; 25(24): 5365–5382. Published online 2016 Oct 29. doi: 10.1093/hmg/ddw352

PMCID:: PMC6078604

Abstract Article PDF–1.9M

Select item 570780511.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 568900212.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 539305413.

Dual functionality of cis-regulatory elements as developmental enhancers and Polycomb response elements

Jelena Erceg, Tibor Pakozdi, Raquel Marco-Ferreres, Yad Ghavi-Helm, Charles Girardot, Adrian P. Bracken, Eileen E.M. Furlong

Genes Dev. 2017 Mar 15; 31(6): 590–602. doi: 10.1101/gad.292870.116

PMCID:: PMC5393054

Abstract Article PDF–1.6M

Select item 498149714.

The composition and organization of Drosophila heterochromatin are heterogeneous and dynamic

Joel M Swenson, Serafin U Colmenares, Amy R Strom, Sylvain V Costes, Gary H Karpen

eLife. 2016; 5: e16096. Published online 2016 Aug 11. doi: 10.7554/eLife.16096

PMCID:: PMC4981497

Abstract Article PDF–4.8M

Select item 488965815.

mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster

Gildas Lepennetier, Francesco Catania

G3 (Bethesda) 2016 Jun; 6(6): 1617–1626. Published online 2016 Mar 28. doi: 10.1534/g3.116.029231

PMCID:: PMC4889658

Abstract Article PDF–1.5M

Select item 459299616.

SUMO-Enriched Proteome for Drosophila Innate Immune Response

Mithila Handu, Bhagyashree Kaduskar, Ramya Ravindranathan, Amarendranath Soory, Ritika Giri, Vijay Barathi Elango, Harsha Gowda, Girish S. Ratnaparkhi

G3 (Bethesda) 2015 Oct; 5(10): 2137–2154. Published online 2015 Aug 18. doi: 10.1534/g3.115.020958

PMCID:: PMC4592996

Abstract Article PDF–2.0M

Select item 453628617.

Identification of Drosophila centromere associated proteins by quantitative affinity purification-mass spectrometry

Teresa K. Barth, Georg O.M. Schade, Andreas Schmidt, Irene Vetter, Marc Wirth, Patrick Heun, Axel Imhof, Andreas W. Thomae

Data Brief. 2015 Sep; 4: 544–550. Published online 2015 Jul 26. doi: 10.1016/j.dib.2015.07.016

PMCID:: PMC4536286

Abstract Article PDF–485K

Select item 452833018.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 452832919.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929

PMCID:: PMC4528329

Abstract Article PDF–4.9M

Select item 435401620.

Centromeric binding and activity of Protein Phosphatase 4

Zoltan Lipinszki, Stephane Lefevre, Matthew S. Savoian, Martin R. Singleton, David M. Glover, Marcin R. Przewloka

Nat Commun. 2015 Jan 6; 6: 5894. Published online 2015 Jan 6. doi: 10.1038/ncomms6894

PMCID:: PMC4354016

Abstract Article PDF–3.0M

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