PMC Links for GEO Profiles (Select 33137320) - PMC

Result Filters

Links from GEO Profiles

Items: 1 to 20 of 43

<< First< Prev

Page of 3

Select item 101838191.

Functionally distinct promoter classes initiate transcription via different mechanisms reflected in focused versus dispersed initiation patterns

Leonid Serebreni, Lisa‐Marie Pleyer, Vanja Haberle, Oliver Hendy, Anna Vlasova, Vincent Loubiere, Filip Nemčko, Katharina Bergauer, Elisabeth Roitinger, Karl Mechtler, Alexander Stark

EMBO J. 2023 May; 42(10): e113519. Published online 2023 Apr 4. doi: 10.15252/embj.2023113519

PMCID:: PMC10183819

Abstract Article PDF–2.7M

Select item 100789172.

A modERN resource: identification of Drosophila transcription factor candidate target genes using RNAi

William W Fisher, Ann S Hammonds, Richard Weiszmann, Benjamin W Booth, Louis Gevirtzman, Jaeda E J Patton, Connor A Kubo, Robert H Waterston, Susan E Celniker

Genetics. 2023 Apr; 223(4): iyad004. Published online 2023 Jan 19. doi: 10.1093/genetics/iyad004

PMCID:: PMC10078917

Abstract Article PDF–18M

Select item 91063023.

Essential role of Cp190 in physical and regulatory boundary formation

Anjali Kaushal, Julien Dorier, Bihan Wang, Giriram Mohana, Michael Taschner, Pascal Cousin, Patrice Waridel, Christian Iseli, Anastasiia Semenova, Simon Restrepo, Nicolas Guex, Erez Lieberman Aiden, Maria Cristina Gambetta

Sci Adv. 2022 May; 8(19): eabl8834. Published online 2022 May 13. doi: 10.1126/sciadv.abl8834

PMCID:: PMC9106302

Abstract Article PDF–8.3M

Select item 76130454.

Transcriptional cofactors display specificity for distinct types of core promoters

Vanja Haberle, Cosmas D. Arnold, Michaela Pagani, Martina Rath, Katharina Schernhuber, Alexander Stark

Nature. Author manuscript; available in PMC 2022 Jul 12.

Published in final edited form as: Nature. 2019 Jun 1; 570(7759): 122–126. Published online 2019 May 15. doi: 10.1038/s41586-019-1210-7

PMCID:: PMC7613045

Abstract Article PDF–6.4M

Select item 74115685.

Predictive features of gene expression variation reveal mechanistic link with differential expression

Olga M Sigalova, Amirreza Shaeiri, Mattia Forneris, Eileen EM Furlong, Judith B Zaugg

Mol Syst Biol. 2020 Aug; 16(8): e9539. Published online 2020 Aug 7. doi: 10.15252/msb.20209539

PMCID:: PMC7411568

Abstract Article PDF–7.7M

Select item 69719236.

Profiling of the muscle-specific dystroglycan interactome reveals the role of Hippo signaling in muscular dystrophy and age-dependent muscle atrophy

Andriy S. Yatsenko, Mariya M. Kucherenko, Yuanbin Xie, Dina Aweida, Henning Urlaub, Renate J. Scheibe, Shenhav Cohen, Halyna R. Shcherbata

BMC Med. 2020; 18: 8. Published online 2020 Jan 21. doi: 10.1186/s12916-019-1478-3

PMCID:: PMC6971923

Abstract Article PDF–14M

Select item 66577257.

Altered Localization of Hybrid Incompatibility Proteins in Drosophila

Jacob Carter Cooper, Andrea Lukacs, Shelley Reich, Tamas Schauer, Axel Imhof, Nitin Phadnis

Mol Biol Evol. 2019 Aug; 36(8): 1783–1792. Published online 2019 Apr 30. doi: 10.1093/molbev/msz105

PMCID:: PMC6657725

Abstract Article PDF–1.5M

Select item 66165998.

Glutathione S-Transferase Regulates Mitochondrial Populations in Axons through Increased Glutathione Oxidation

Gaynor A. Smith, Tzu-Huai Lin, Amy E. Sheehan, Wynand Van der Goes van Naters, Lukas J. Neukomm, Hillary K. Graves, Dana M. Bis-Brewer, Stephan Züchner, Marc R. Freeman

Neuron. 2019 Jul 3; 103(1): 52–65.e6. doi: 10.1016/j.neuron.2019.04.017

PMCID:: PMC6616599

Abstract Article

Select item 64859569.

A Comprehensive Drosophila melanogaster Transcription Factor Interactome

Leila Shokri, Sachi Inukai, Antonina Hafner, Kathryn Weinand, Korneel Hens, Anastasia Vedenko, Stephen S. Gisselbrecht, Riccardo Dainese, Johannes Bischof, Edy Furger, Jean-Daniel Feuz, Konrad Basler, Bart Deplancke, Martha L. Bulyk

Cell Rep. Author manuscript; available in PMC 2019 Apr 26.

Published in final edited form as: Cell Rep. 2019 Apr 16; 27(3): 955–970.e7. doi: 10.1016/j.celrep.2019.03.071

PMCID:: PMC6485956

Abstract Article PDF–1.6M

Select item 578903010.

GFZF, a Glutathione S-Transferase Protein Implicated in Cell Cycle Regulation and Hybrid Inviability, Is a Transcriptional Coactivator

Douglas G. Baumann, Mu-Shui Dai, Hua Lu, David S. Gilmour

Mol Cell Biol. 2018 Feb 15; 38(4): e00476-17. Prepublished online 2017 Nov 20. Published online 2018 Jan 29. doi: 10.1128/MCB.00476-17

PMCID:: PMC5789030

Abstract Article PDF–1.8M

Select item 570780511.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 568900212.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 530735913.

A pupal transcriptomic screen identifies Ral as a target of store-operated calcium entry in Drosophila neurons

Shlesha Richhariya, Siddharth Jayakumar, Katharine Abruzzi, Michael Rosbash, Gaiti Hasan

Sci Rep. 2017; 7: 42586. Published online 2017 Feb 14. doi: 10.1038/srep42586

PMCID:: PMC5307359

Abstract Article PDF–2.1M

Select item 501407914.

Seizure suppression through manipulating splicing of a voltage-gated sodium channel

Wei-Hsiang Lin, Miaomiao He, Richard A. Baines

Brain. 2015 Apr; 138(4): 891–901. Published online 2015 Feb 12. doi: 10.1093/brain/awv012

PMCID:: PMC5014079

Abstract Article PDF–541K

Select item 470331115.

An essential cell cycle regulation gene causes hybrid inviability in Drosophila

Nitin Phadnis, EmilyClare P. Baker, Jacob C. Cooper, Kimberly A. Frizzell, Emily Hsieh, Aida Flor A. de la Cruz, Jay Shendure, Jacob O. Kitzman, Harmit S. Malik

Science. Author manuscript; available in PMC 2016 Mar 18.

Published in final edited form as: Science. 2015 Dec 18; 350(6267): 1552–1555. doi: 10.1126/science.aac7504

PMCID:: PMC4703311

Abstract Article PDF–434K

Select item 453628616.

Identification of Drosophila centromere associated proteins by quantitative affinity purification-mass spectrometry

Teresa K. Barth, Georg O.M. Schade, Andreas Schmidt, Irene Vetter, Marc Wirth, Patrick Heun, Axel Imhof, Andreas W. Thomae

Data Brief. 2015 Sep; 4: 544–550. Published online 2015 Jul 26. doi: 10.1016/j.dib.2015.07.016

PMCID:: PMC4536286

Abstract Article PDF–485K

Select item 452833017.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 452832918.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929

PMCID:: PMC4528329

Abstract Article PDF–4.9M

Select item 445871419.

The Drosophila Helicase Maleless (MLE) is Implicated in Functions Distinct From its Role in Dosage Compensation

Simona Cugusi, Satish Kallappagoudar, Huiping Ling, John C. Lucchesi

Mol Cell Proteomics. 2015 Jun; 14(6): 1478–1488. Published online 2015 Mar 16. doi: 10.1074/mcp.M114.040667

PMCID:: PMC4458714

Abstract Article PDF–625K

Select item 440366720.

Transcription Factor Networks in Drosophila melanogaster

David Y. Rhee, Dong-Yeon Cho, Bo Zhai, Matthew Slattery, Lijia Ma, Julian Mintseris, Christina Y. Wong, Kevin P. White, Susan E. Celniker, Teresa M. Przytycka, Steven P. Gygi, Robert A. Obar, Spyros Artavanis-Tsakonas

Cell Rep. Author manuscript; available in PMC 2015 Apr 20.

Published in final edited form as: Cell Rep. 2014 Sep 25; 8(6): 2031–2043. Published online 2014 Sep 18. doi: 10.1016/j.celrep.2014.08.038