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Select item 109627591.

A comprehensive Drosophila resource to identify key functional interactions between SARS-CoV-2 factors and host proteins

Annabel Guichard, Shenzhao Lu, Oguz Kanca, Daniel Bressan, Yan Huang, Mengqi Ma, Sara Sanz Juste, Jonathan C. Andrews, Kristy L. Jay, Marketta Sneider, Ruth Schwartz, Mei-Chu Huang, Danqing Bei, Hongling Pan, Liwen Ma, Wen-Wen Lin, Ankush Auradkar, Pranjali Bhagwat, Soo Park, Kenneth H. Wan, Takashi Ohsako, Toshiyuki Takano-Shimizu, Susan E. Celniker, Michael F. Wangler, Shinya Yamamoto, Hugo J. Bellen, Ethan Bier

Cell Rep. Author manuscript; available in PMC 2024 Mar 25.

Published in final edited form as: Cell Rep. 2023 Aug 29; 42(8): 112842. Published online 2023 Jul 20. doi: 10.1016/j.celrep.2023.112842

PMCID:: PMC10962759

Abstract Article PDF–3.0M

Select item 88834432.

Single‐cell RNA sequencing of motoneurons identifies regulators of synaptic wiring in Drosophila embryos

Jessica Velten, Xuefan Gao, Patrick Van Nierop y Sanchez, Katrin Domsch, Rashi Agarwal, Lena Bognar, Malte Paulsen, Lars Velten, Ingrid Lohmann

Mol Syst Biol. 2022 Mar; 18(3): e10255. Published online 2022 Feb 28. doi: 10.15252/msb.202110255

PMCID:: PMC8883443

Abstract Article PDF–3.0M

Select item 81392873.

The molecular landscape of neural differentiation in the developing Drosophila brain revealed by targeted scRNA-seq and multi-informatic analysis

Nigel S. Michki, Ye Li, Kayvon Sanjasaz, Yimeng Zhao, Fred Y. Shen, Logan A. Walker, Wenjia Cao, Cheng-Yu Lee, Dawen Cai

Cell Rep. Author manuscript; available in PMC 2021 May 21.

Published in final edited form as: Cell Rep. 2021 Apr 27; 35(4): 109039. doi: 10.1016/j.celrep.2021.109039

PMCID:: PMC8139287

Abstract Article PDF–1.6M

Select item 78515964.

Genomics of Recombination Rate Variation in Temperature-Evolved Drosophila melanogaster Populations

Ari Winbush, Nadia D Singh

Genome Biol Evol. 2021 Jan; 13(1): evaa252. Published online 2020 Nov 28. doi: 10.1093/gbe/evaa252

PMCID:: PMC7851596

Abstract Article PDF–778K

Select item 73931615.

Multiple loci linked to inversions are associated with eye size variation in species of the Drosophila virilis phylad

Micael Reis, Gordon Wiegleb, Julien Claude, Rodrigo Lata, Britta Horchler, Ngoc-Thuy Ha, Christian Reimer, Cristina P. Vieira, Jorge Vieira, Nico Posnien

Sci Rep. 2020; 10: 12832. Published online 2020 Jul 30. doi: 10.1038/s41598-020-69719-z

PMCID:: PMC7393161

Abstract Article PDF–1.9M

Select item 73492866.

Genetic Control of Muscle Diversification and Homeostasis: Insights from Drosophila

Preethi Poovathumkadavil, Krzysztof Jagla

Cells. 2020 Jun; 9(6): 1543. Published online 2020 Jun 25. doi: 10.3390/cells9061543

PMCID:: PMC7349286

Abstract Article PDF–4.0M

Select item 68932077.

An Atlas of Transcription Factors Expressed in Male Pupal Terminalia of Drosophila melanogaster

Ben J. Vincent, Gavin R. Rice, Gabriella M. Wong, William J. Glassford, Kayla I. Downs, Jessica L. Shastay, Kenechukwu Charles-Obi, Malini Natarajan, Madelaine Gogol, Julia Zeitlinger, Mark Rebeiz

G3 (Bethesda) 2019 Dec; 9(12): 3961–3972. Published online 2019 Oct 16. doi: 10.1534/g3.119.400788

PMCID:: PMC6893207

Abstract Article PDF–2.1M

Select item 66217318.

Loss of PAFAH1B2 Reduces Amyloid-β Generation by Promoting the Degradation of Amyloid Precursor Protein C-Terminal Fragments

Richard M. Page, Anna Münch, Thomas Horn, Peer-Hendrik Kuhn, Alessio Colombo, Orly Reiner, Michael Boutros, Harald Steiner, Stefan F. Lichtenthaler, Christian Haass

J Neurosci. 2012 Dec 12; 32(50): 18204–18214. doi: 10.1523/JNEUROSCI.2681-12.2012

PMCID:: PMC6621731

Abstract Article PDF–2.0M

Select item 64859569.

A Comprehensive Drosophila melanogaster Transcription Factor Interactome

Leila Shokri, Sachi Inukai, Antonina Hafner, Kathryn Weinand, Korneel Hens, Anastasia Vedenko, Stephen S. Gisselbrecht, Riccardo Dainese, Johannes Bischof, Edy Furger, Jean-Daniel Feuz, Konrad Basler, Bart Deplancke, Martha L. Bulyk

Cell Rep. Author manuscript; available in PMC 2019 Apr 26.

Published in final edited form as: Cell Rep. 2019 Apr 16; 27(3): 955–970.e7. doi: 10.1016/j.celrep.2019.03.071

PMCID:: PMC6485956

Abstract Article PDF–1.6M

Select item 647282910.

Identification of evolutionarily conserved downstream core promoter elements required for the transcriptional regulation of Fushi tarazu target genes

Hila Shir-Shapira, Anna Sloutskin, Orit Adato, Avital Ovadia-Shochat, Diana Ideses, Yonathan Zehavi, George Kassavetis, James T. Kadonaga, Ron Unger, Tamar Juven-Gershon

PLoS One. 2019; 14(4): e0215695. Published online 2019 Apr 18. doi: 10.1371/journal.pone.0215695

PMCID:: PMC6472829

Abstract Article PDF–1.6M

Select item 644619811.

Ash1 counteracts Polycomb repression independent of histone H3 lysine 36 methylation

Eshagh Dorafshan, Tatyana G Kahn, Alexander Glotov, Mikhail Savitsky, Matthias Walther, Gunter Reuter, Yuri B Schwartz

EMBO Rep. 2019 Apr; 20(4): e46762. Published online 2019 Mar 4. doi: 10.15252/embr.201846762

PMCID:: PMC6446198

Abstract Article PDF–2.1M

Select item 617725712.

Generation of a versatile BiFC ORFeome library for analyzing protein–protein interactions in live Drosophila

Johannes Bischof, Marilyne Duffraisse, Edy Furger, Leiore Ajuria, Guillaume Giraud, Solene Vanderperre, Rachel Paul, Mikael Björklund, Damien Ahr, Alexis W Ahmed, Lionel Spinelli, Christine Brun, Konrad Basler, Samir Merabet

eLife. 2018; 7: e38853. Published online 2018 Sep 24. doi: 10.7554/eLife.38853

PMCID:: PMC6177257

Abstract Article PDF–4.9M

Select item 573797413.

Decreased expression of lethal giant larvae causes ovarian follicle cell outgrowth in the Drosophila Scutoid mutant

Chen-Yuan Tseng, Hwei-Jan Hsu

PLoS One. 2017; 12(12): e0188917. Published online 2017 Dec 20. doi: 10.1371/journal.pone.0188917

PMCID:: PMC5737974

Abstract Article PDF–35M

Select item 570780514.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 568900215.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 565704816.

McEnhancer: predicting gene expression via semi-supervised assignment of enhancers to target genes

Dina Hafez, Aslihan Karabacak, Sabrina Krueger, Yih-Chii Hwang, Li-San Wang, Robert P. Zinzen, Uwe Ohler

Genome Biol. 2017; 18: 199. Published online 2017 Oct 26. doi: 10.1186/s13059-017-1316-x

PMCID:: PMC5657048

Abstract Article PDF–2.7M

Select item 540616717.

Mobile-phone radiation-induced perturbation of gene-expression profiling, redox equilibrium and sporadic-apoptosis control in the ovary of Drosophila melanogaster

Areti K. Manta, Deppie Papadopoulou, Alexander P. Polyzos, Adamantia F. Fragopoulou, Aikaterini S. Skouroliakou, Dimitris Thanos, Dimitrios J. Stravopodis, Lukas H. Margaritis

Fly (Austin) 2017; 11(2): 75–95. Published online 2016 Dec 14. doi: 10.1080/19336934.2016.1270487

PMCID:: PMC5406167

Abstract Article PDF–1.4M

Select item 539389018.

Probing the canonicity of the Wnt/Wingless signaling pathway

Alexandra Franz, Daria Shlyueva, Erich Brunner, Alexander Stark, Konrad Basler

PLoS Genet. 2017 Apr; 13(4): e1006700. Published online 2017 Apr 3. doi: 10.1371/journal.pgen.1006700

PMCID:: PMC5393890

Abstract Article PDF–2.1M

Select item 532507719.

Genome-wide measurement of spatial expression in patterning mutants of Drosophila melanogaster

Peter A. Combs, Michael B. Eisen

Version 1. F1000Res. 2017; 6: 41. Published online 2017 Jan 12. doi: 10.12688/f1000research.9720.1

PMCID:: PMC5325077

Abstract Article PDF–10M

Select item 514407720.

Evolution of the NET (NocA, Nlz, Elbow, TLP-1) protein family in metazoans: insights from expression data and phylogenetic analysis

Filipe Pereira, Sara Duarte-Pereira, Raquel M. Silva, Luís Teixeira da Costa, Isabel Pereira-Castro

Sci Rep. 2016; 6: 38383. Published online 2016 Dec 8. doi: 10.1038/srep38383

PMCID:: PMC5144077

Abstract Article PDF–2.4M

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