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Select item 111133411.

Expanding the roles of chromatin insulators in nuclear architecture, chromatin organization and genome function

Todd Schoborg, Mariano Labrador

Cell Mol Life Sci. 2014 Nov; 71(21): 4089–4113. Published online 2014 Jul 11. doi: 10.1007/s00018-014-1672-6

PMCID:: PMC11113341

Abstract Article PDF–887K

Select item 101057362.

Next-generation large-scale binary protein interaction network for Drosophila melanogaster

Hong-Wen Tang, Kerstin Spirohn, Yanhui Hu, Tong Hao, István A. Kovács, Yue Gao, Richard Binari, Donghui Yang-Zhou, Kenneth H. Wan, Joel S. Bader, Dawit Balcha, Wenting Bian, Benjamin W. Booth, Atina G. Coté, Steffi de Rouck, Alice Desbuleux, Kah Yong Goh, Dae-Kyum Kim, Jennifer J. Knapp, Wen Xing Lee, Irma Lemmens, Cathleen Li, Mian Li, Roujia Li, Hyobin Julianne Lim, Yifang Liu, Katja Luck, Dylan Markey, Carl Pollis, Sudharshan Rangarajan, Jonathan Rodiger, Sadie Schlabach, Yun Shen, Dayag Sheykhkarimli, Bridget TeeKing, Frederick P. Roth, Jan Tavernier, Michael A. Calderwood, David E. Hill, Susan E. Celniker, Marc Vidal, Norbert Perrimon, Stephanie E. Mohr

Nat Commun. 2023; 14: 2162. Published online 2023 Apr 15. doi: 10.1038/s41467-023-37876-0

PMCID:: PMC10105736

Abstract Article PDF–3.2M

Select item 95260663.

The RNA-binding protein Swm is critical for Drosophila melanogaster intestinal progenitor cell maintenance

Ishara S Ariyapala, Kasun Buddika, Heather A Hundley, Brian R Calvi, Nicholas S Sokol

Genetics. 2022 Oct; 222(2): iyac099. Published online 2022 Jun 28. doi: 10.1093/genetics/iyac099

PMCID:: PMC9526066

Abstract Article PDF–1.4M

Select item 88152974.

GAGA factor: a multifunctional pioneering chromatin protein

Darya Chetverina, Maksim Erokhin, Paul Schedl

Cell Mol Life Sci. 2021 May; 78(9): 4125–4141. Published online 2021 Feb 2. doi: 10.1007/s00018-021-03776-z

PMCID:: PMC8815297

Abstract Article PDF–3.5M

Select item 86644865.

Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes

Ana López-Varea, Patricia Vega-Cuesta, Ana Ruiz-Gómez, Cristina M Ostalé, Cristina Molnar, Covadonga F Hevia, Mercedes Martín, Maria F Organista, Jesus de Celis, Joaquín Culí, Nuria Esteban, Jose F de Celis

G3 (Bethesda) 2021 Dec; 11(12): jkab349. Published online 2021 Oct 2. doi: 10.1093/g3journal/jkab349

PMCID:: PMC8664486

Abstract Article PDF–3.1M

Select item 86451186.

Nuclear transport genes recurrently duplicate by means of RNA intermediates in Drosophila but not in other insects

Ayda Mirsalehi, Dragomira N. Markova, Mohammadmehdi Eslamieh, Esther Betrán

BMC Genomics. 2021; 22: 876. Published online 2021 Dec 5. doi: 10.1186/s12864-021-08170-4

PMCID:: PMC8645118

Abstract Article PDF–2.4M

Select item 82282937.

Multi-Scale Organization of the Drosophila melanogaster Genome

Samantha C. Peterson, Kaylah B. Samuelson, Stacey L. Hanlon

Genes (Basel) 2021 Jun; 12(6): 817. Published online 2021 May 27. doi: 10.3390/genes12060817

PMCID:: PMC8228293

Abstract Article PDF–1.0M

Select item 79368768.

A Non-stop identity complex (NIC) supervises enterocyte identity and protects from premature aging

Neta Erez, Lena Israitel, Eliya Bitman-Lotan, Wing H Wong, Gal Raz, Dayanne V Cornelio-Parra, Salwa Danial, Na'ama Flint Brodsly, Elena Belova, Oksana Maksimenko, Pavel Georgiev, Todd Druley, Ryan D Mohan, Amir Orian

eLife. 2021; 10: e62312. Published online 2021 Feb 25. doi: 10.7554/eLife.62312

PMCID:: PMC7936876

Abstract Article PDF–11M

Select item 78006069.

The Functions and Mechanisms of Action of Insulators in the Genomes of Higher Eukaryotes

L. S. Melnikova, P. G. Georgiev, A. K. Golovnin

Acta Naturae. 2020 Oct-Dec; 12(4): 15–33. doi: 10.32607/actanaturae.11144

PMCID:: PMC7800606

Abstract Article PDF–5.8M

Select item 757883010.

Proteomic analysis of Drosophila CLOCK complexes identifies rhythmic interactions with SAGA and Tip60 complex component NIPPED-A

Guruswamy Mahesh, Gustavo B. S. Rivas, Courtney Caster, Evan B. Ost, Ravi Amunugama, Richard Jones, David L. Allen, Paul E. Hardin

Sci Rep. 2020; 10: 17951. Published online 2020 Oct 21. doi: 10.1038/s41598-020-75009-5

PMCID:: PMC7578830

Abstract Article PDF–2.5M

Select item 727221711.

Nucleocytoplasmic Proteomic Analysis Uncovers eRF1 and Nonsense Mediated Decay as Modifiers of ALS C9orf72 Toxicity

Juan A. Ortega, Elizabeth L. Daley, Sukhleen Kour, Marisa Samani, Liana Tellez, Haley S. Smith, Elizabeth A. Hall, Taylan Y. Esengul, Yung-Hsu Tsai, Tania F. Gendron, Christopher J. Donnelly, Teepu Siddique, Jeffrey N. Savas, Udai B. Pandey, Evangelos Kiskinis

Neuron. Author manuscript; available in PMC 2021 Apr 8.

Published in final edited form as: Neuron. 2020 Apr 8; 106(1): 90–107.e13. Published online 2020 Feb 13. doi: 10.1016/j.neuron.2020.01.020

PMCID:: PMC7272217

Abstract Article PDF–1.5M

Select item 696157812.

CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans

Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang

Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119

PMCID:: PMC6961578

Abstract Article PDF–3.6M

Select item 650400313.

Distinct gene-selective roles for a network of core promoter factors in Drosophila neural stem cell identity

Alexandre Neves, Robert N. Eisenman

Biol Open. 2019 Apr 15; 8(4): bio042168. Published online 2019 Apr 15. doi: 10.1242/bio.042168

PMCID:: PMC6504003

Abstract Article PDF–4.4M

Select item 635103014.

Zinc Finger Protein CG9890 - New Component of ENY2-Containing Complexes of Drosophila

N. A. Fursova, J. V. Nikolenko, N. V. Soshnikova, M. Y. Mazina, N. E. Vorobyova, A. N. Krasnov

Acta Naturae. 2018 Oct-Dec; 10(4): 110–114.

PMCID:: PMC6351030

Abstract Article PDF–1.2M

Select item 615253415.

The role of SAGA coactivator complex in snRNA transcription

V. V. Popova, A. V. Orlova, M. M. Kurshakova, J. V. Nikolenko, E. N. Nabirochkina, S. G. Georgieva, D. V. Kopytova

Cell Cycle. 2018; 17(15): 1859–1870. Published online 2018 Aug 15. doi: 10.1080/15384101.2018.1489175

PMCID:: PMC6152534

Abstract Article PDF–2.4M

Select item 607860416.

Human R1441C LRRK2 regulates the synaptic vesicle proteome and phosphoproteome in a Drosophila model of Parkinson’s disease

Md Shariful Islam, Hendrik Nolte, Wright Jacob, Anna B. Ziegler, Stefanie Pütz, Yael Grosjean, Karolina Szczepanowska, Aleksandra Trifunovic, Thomas Braun, Hermann Heumann, Rolf Heumann, Bernhard Hovemann, Darren J. Moore, Marcus Krüger

Hum Mol Genet. 2016 Dec 15; 25(24): 5365–5382. Published online 2016 Oct 29. doi: 10.1093/hmg/ddw352

PMCID:: PMC6078604

Abstract Article PDF–1.9M

Select item 601319017.

The Ubx Polycomb response element bypasses an unpaired Fab-8 insulator via cis transvection in Drosophila

Danfeng Lu, Zhuoran Li, Lingling Li, Liping Yang, Guijun Chen, Deying Yang, Yue Zhang, Vikrant Singh, Sheryl Smith, Yu Xiao, Erlin Wang, Yunshuang Ye, Wei Zhang, Lei Zhou, Yikang Rong, Jumin Zhou

PLoS One. 2018; 13(6): e0199353. Published online 2018 Jun 21. doi: 10.1371/journal.pone.0199353

PMCID:: PMC6013190

Abstract Article PDF–8.4M

Select item 570780518.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 568900219.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 535198120.

The GAGA factor regulatory network: Identification of GAGA factor associated proteins

Dmitry Lomaev, Anna Mikhailova, Maksim Erokhin, Alexander V. Shaposhnikov, James J. Moresco, Tatiana Blokhina, Daniel Wolle, Tsutomu Aoki, Vladimir Ryabykh, John R. Yates, III, Yulii V. Shidlovskii, Pavel Georgiev, Paul Schedl, Darya Chetverina

PLoS One. 2017; 12(3): e0173602. Published online 2017 Mar 15. doi: 10.1371/journal.pone.0173602

PMCID:: PMC5351981

Abstract Article PDF–2.6M

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