PMC Links for GEO Profiles (Select 30585611) - PMC

Select item 109176601.

Genetic determinants of micronucleus formation in vivo

D. J. Adams, B. Barlas, R. E. McIntyre, I. Salguero, L. van der Weyden, A. Barros, J. R. Vicente, N. Karimpour, A. Haider, M. Ranzani, G. Turner, N. A. Thompson, V. Harle, R. Olvera-León, C. D. Robles-Espinoza, A. O. Speak, N. Geisler, W. J. Weninger, S. H. Geyer, J. Hewinson, N. A. Karp, The Sanger Mouse Genetics Project, B. Fu, F. Yang, Z. Kozik, J. Choudhary, L. Yu, M. S. van Ruiten, B. D. Rowland, C. J. Lelliott, M. del Castillo Velasco-Herrera, R. Verstraten, L. Bruckner, A. G. Henssen, M. A. Rooimans, J. de Lange, T. J. Mohun, M. J. Arends, K. A. Kentistou, P. A. Coelho, Y. Zhao, H. Zecchini, J. R. B. Perry, S. P. Jackson, G. Balmus

Nature. 2024; 627(8002): 130–136. Published online 2024 Feb 14. doi: 10.1038/s41586-023-07009-0

PMCID:: PMC10917660

Abstract Article PDF–4.8M

Select item 67616482.

Expression of Normally Repressed Myosin Heavy Chain 7b in the Mammalian Heart Induces Dilated Cardiomyopathy

Angela K. Peter, Alberto C. Rossi, Massimo Buvoli, Christopher D. Ozeroff, Claudia Crocini, Amy R. Perry, Ada E. Buvoli, Lindsey A. Lee, Leslie A. Leinwand

J Am Heart Assoc. 2019 Aug 6; 8(15): e013318. Published online 2019 Jul 31. doi: 10.1161/JAHA.119.013318

PMCID:: PMC6761648

Abstract Article PDF–7.6M

Select item 64595103.

Mouse screen reveals multiple new genes underlying mouse and human hearing loss

Neil J. Ingham, Selina A. Pearson, Valerie E. Vancollie, Victoria Rook, Morag A. Lewis, Jing Chen, Annalisa Buniello, Elisa Martelletti, Lorenzo Preite, Chi Chung Lam, Felix D. Weiss, Zӧe Powis, Pim Suwannarat, Christopher J. Lelliott, Sally J. Dawson, Jacqueline K. White, Karen P. Steel

PLoS Biol. 2019 Apr; 17(4): e3000194. Published online 2019 Apr 11. doi: 10.1371/journal.pbio.3000194

PMCID:: PMC6459510

Abstract Article PDF–5.1M

Select item 47347494.

Developmental expression and cardiac transcriptional regulation of Myh7b, a third myosin heavy chain in the vertebrate heart

Andrew S. Warkman, Samantha A. Whitman, Melanie K. Miller, Robert J. Garriock, Catherine M. Schwach, Carol C. Gregorio, Paul A. Krieg

Cytoskeleton (Hoboken) Author manuscript; available in PMC 2016 Feb 1.

Published in final edited form as: Cytoskeleton (Hoboken). 2012 May; 69(5): 324–335. Published online 2012 Apr 30. doi: 10.1002/cm.21029

Correction in:: volume 69 on page 1086

PMCID:: PMC4734749

Abstract Article PDF–1.1M

Select item 40651535.

Histone deacetylase 3 modulates Tbx5 activity to regulate early cardiogenesis

Sara L. Lewandowski, Harish P. Janardhan, Kevin M. Smee, Marcos Bachman, Zheng Sun, Mitchell A. Lazar, Chinmay M. Trivedi

Hum Mol Genet. 2014 Jul 15; 23(14): 3801–3809. Published online 2014 Feb 23. doi: 10.1093/hmg/ddu093

PMCID:: PMC4065153

Abstract Article PDF–884K

Select item 36691236.

Early de novo DNA methylation and prolonged demethylation in the muscle lineage

Koji Tsumagari, Carl Baribault, Jolyon Terragni, Katherine E. Varley, Jason Gertz, Sirharsa Pradhan, Melody Badoo, Charlene M. Crain, Lingyun Song, Gregory E. Crawford, Richard M. Myers, Michelle Lacey, Melanie Ehrlich

Epigenetics. 2013 Mar 1; 8(3): 317–332. Published online 2013 Feb 15. doi: 10.4161/epi.23989

PMCID:: PMC3669123

Abstract Article PDF–2.8M

Select item 35724107.

A conditional knockout resource for the genome–wide study of mouse gene function

William C. Skarnes, Barry Rosen, Anthony P. West, Manousos Koutsourakis, Wendy Bushell, Vivek Iyer, Alejandro O. Mujica, Mark Thomas, Jennifer Harrow, Tony Cox, David Jackson, Jessica Severin, Patrick Biggs, Jun Fu, Michael Nefedov, Pieter J. de Jong, A. Francis Stewart, Allan Bradley

Nature. Author manuscript; available in PMC 2013 Feb 14.

Published in final edited form as: Nature. 2011 Jun 15; 474(7351): 337–342. Published online 2011 Jun 15. doi: 10.1038/nature10163

PMCID:: PMC3572410

Abstract Article PDF–1.1M

Select item 34245788.

Myh7b/miR-499 gene expression is transcriptionally regulated by MRFs and Eos

Fan Yeung, Eunhee Chung, Martin G. Guess, Matthew L. Bell, Leslie A. Leinwand

Nucleic Acids Res. 2012 Aug; 40(15): 7303–7318. Published online 2012 May 24. doi: 10.1093/nar/gks466

PMCID:: PMC3424578

Abstract Article PDF–12M

Select item 33906789.

Characterization of Arginylation Branch of N-end Rule Pathway in G-protein-mediated Proliferation and Signaling of Cardiomyocytes

Min Jae Lee, Dong Eun Kim, Adriana Zakrzewska, Young Dong Yoo, Su-Hyeon Kim, Sung Tae Kim, Jai Wha Seo, Young Sook Lee, Gerald W. Dorn, II, UhTaek Oh, Bo Yeon Kim, Yong Tae Kwon

J Biol Chem. 2012 Jul 6; 287(28): 24043–24052. Published online 2012 May 10. doi: 10.1074/jbc.M112.364117

PMCID:: PMC3390678

Abstract Article PDF–2.4M

Select item 323929610.

Genome-wide mapping of Sox6 binding sites in skeletal muscle reveals both direct and indirect regulation of muscle terminal differentiation by Sox6

Chung-Il An, Yao Dong, Nobuko Hagiwara

BMC Dev Biol. 2011; 11: 59. Published online 2011 Oct 10. doi: 10.1186/1471-213X-11-59

PMCID:: PMC3239296

Abstract Article PDF–5.4M

Select item 317805911.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 302253412.

A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo

Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio

PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582

PMCID:: PMC3022534

Abstract Article PDF–3.8M

Select item 284946013.

Uncoupling of Expression of an Intronic MicroRNA and Its Myosin Host Gene by Exon Skipping

Matthew L. Bell, Massimo Buvoli, Leslie A. Leinwand

Mol Cell Biol. 2010 Apr; 30(8): 1937–1945. Published online 2010 Feb 2. doi: 10.1128/MCB.01370-09

PMCID:: PMC2849460

Abstract Article PDF–3.9M

Select item 282152714.

Two novel/ancient myosins in mammalian skeletal muscles: MYH14/7b and MYH15 are expressed in extraocular muscles and muscle spindles

Alberto C Rossi, Cristina Mammucari, Carla Argentini, Carlo Reggiani, Stefano Schiaffino

J Physiol. 2010 Jan 15; 588(Pt 2): 353–364. Published online 2009 Nov 30. doi: 10.1113/jphysiol.2009.181008

PMCID:: PMC2821527

Abstract Article PDF–813K

Select item 279637115.

A family of microRNAs encoded by myosin genes governs myosin expression and muscle performance

Eva van Rooij, Daniel Quiat, Brett A. Johnson, Lillian B. Sutherland, Xiaoxia Qi, James A. Richardson, Robert J. Kelm, Jr, Eric N. Olson

Dev Cell. Author manuscript; available in PMC 2010 Nov 17.

Published in final edited form as: Dev Cell. 2009 Nov; 17(5): 662–673. doi: 10.1016/j.devcel.2009.10.013

PMCID:: PMC2796371

Abstract Article PDF–3.1M

Select item 40371216.

Targeting a Complex Transcriptome: The Construction of the Mouse Full-Length cDNA Encyclopedia

Piero Carninci, Kazunori Waki, Toshiyuki Shiraki, Hideaki Konno, Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Takahiro Arakawa, Yoshiyuki Ishii, Daisuke Sasaki, Hidemasa Bono, Shinji Kondo, Yuichi Sugahara, Rintaro Saito, Naoki Osato, Shiro Fukuda, Kenjiro Sato, Akira Watahiki, Tomoko Hirozane-Kishikawa, Mari Nakamura, Yuko Shibata, Ayako Yasunishi, Noriko Kikuchi, Atsushi Yoshiki, Moriaki Kusakabe, Stefano Gustincich, Kirk Beisel, William Pavan, Vassilis Aidinis, Akira Nakagawara, William A. Held, Hiroo Iwata, Tomohiro Kono, Hiromitsu Nakauchi, Paul Lyons, Christine Wells, David A. Hume, Michela Fagiolini, Takao K. Hensch, Michelle Brinkmeier, Sally Camper, Junji Hirota, Peter Mombaerts, Masami Muramatsu, Yasushi Okazaki, Jun Kawai, Yoshihide Hayashizaki

Genome Res. 2003 Jun; 13(6b): 1273–1289. doi: 10.1101/gr.1119703

PMCID:: PMC403712

Abstract Article PDF–770K

Select item 31099217.

RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer

Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki

Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600

PMCID:: PMC310992

Abstract Article PDF–3.4M

Select item 31098018.

Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes

Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki

Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100

PMCID:: PMC310980

Abstract Article PDF–1.4M

Select item 28355419.

Wnk1 kinase deficiency lowers blood pressure in mice: A gene-trap screen to identify potential targets for therapeutic intervention

Brian P. Zambrowicz, Alejandro Abuin, Ramiro Ramirez-Solis, Lizabeth J. Richter, James Piggott, Hector BeltrandelRio, Eric C. Buxton, Joel Edwards, Rick A. Finch, Carl J. Friddle, Anupma Gupta, Gwenn Hansen, Yi Hu, Wenhu Huang, Crystal Jaing, Billie Wayne Key, Jr., Peter Kipp, Buckley Kohlhauff, Zhi-Qing Ma, Diane Markesich, Robert Payne, David G. Potter, Ny Qian, Joseph Shaw, Jeff Schrick, Zheng-Zheng Shi, Mary Jean Sparks, Isaac Van Sligtenhorst, Peter Vogel, Wade Walke, Nianhua Xu, Qichao Zhu, Christophe Person, Arthur T. Sands

Proc Natl Acad Sci U S A. 2003 Nov 25; 100(24): 14109–14114. Published online 2003 Nov 10. doi: 10.1073/pnas.2336103100

Correction in:: Proc Natl Acad Sci U S A. 2004 Mar 23; 101(12): 4332.

PMCID:: PMC283554

Abstract Article PDF–481K

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