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Items: 1 to 20 of 36

1.
CHD4 and SMYD1 repress common transcriptional programs in the developing heart
Wei Shi, Lauren K. Wasson, Kerry M. Dorr, Zachary L. Robbe, Caralynn M. Wilczewski, Austin J. Hepperla, Ian J. Davis, Christine E. Seidman, Jonathan G. Seidman, Frank L. Conlon
Development. 2024 Apr 15; 151(8): dev202505. Published online 2024 May 3. doi: 10.1242/dev.202505
PMCID:
PMC11112163
AbstractArticle
2.
SMYD1a protects the heart from ischemic injury by regulating OPA1-mediated cristae remodeling and supercomplex formation
Marta W. Szulik, Steven Valdez, Maureen Walsh, Kathryn Davis, Ryan Bia, Emilee Horiuchi, Sean O’Very, Anil K. Laxman, Linda Sandaklie-Nicolova, David R. Eberhardt, Jessica R. Durrant, Hanin Sheikh, Samuel Hickenlooper, Magnus Creed, Cameron Brady, Mickey Miller, Li Wang, June Garcia-Llana, Christopher Tracy, Stavros G. Drakos, Katsuhiko Funai, Dipayan Chaudhuri, Sihem Boudina, Sarah Franklin
Basic Res Cardiol. 2023; 118(1): 20. Published online 2023 May 22. doi: 10.1007/s00395-023-00991-6
PMCID:
PMC10203008
AbstractArticlePDF–7.3M
3.
DOT1L regulates chamber-specific transcriptional networks during cardiogenesis and mediates postnatal cell cycle withdrawal
Paola Cattaneo, Michael G. B. Hayes, Nina Baumgarten, Dennis Hecker, Sofia Peruzzo, Galip S. Aslan, Paolo Kunderfranco, Veronica Larcher, Lunfeng Zhang, Riccardo Contu, Gregory Fonseca, Simone Spinozzi, Ju Chen, Gianluigi Condorelli, Stefanie Dimmeler, Marcel H. Schulz, Sven Heinz, Nuno Guimarães-Camboa, Sylvia M. Evans
Nat Commun. 2022; 13: 7444. Published online 2022 Dec 2. doi: 10.1038/s41467-022-35070-2
PMCID:
PMC9718823
AbstractArticlePDF–9.4M
4.
Smyd1 Orchestrates Early Heart Development Through Positive and Negative Gene Regulation
Zhen Wang, Robert J. Schwartz, Jing Liu, Fei Sun, Qi Li, Yanlin Ma
Front Cell Dev Biol. 2021; 9: 654682. Published online 2021 Apr 1. doi: 10.3389/fcell.2021.654682
PMCID:
PMC8047137
AbstractArticlePDF–2.1M
5.
BraInMap elucidates the macromolecular connectivity landscape of mammalian brain
Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili
Cell Syst. Author manuscript; available in PMC 2021 Apr 22.
Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003
Correction in:
Cell Syst. 2020 Aug 26; 11(2): 208.
PMCID:
PMC7938770
AbstractArticlePDF–2.0M
6.
Perm1 regulates cardiac energetics as a downstream target of the histone methyltransferase Smyd1
Shin-ichi Oka, Amira D. Sabry, Amanda K. Horiuchi, Keiko M. Cawley, Sean A. O’Very, Maria A. Zaitsev, Thirupura S. Shankar, Jaemin Byun, Risa Mukai, Xiaoyong Xu, Natalia S. Torres, Anil Kumar, Masayuki Yazawa, Jing Ling, Iosif Taleb, Yukio Saijoh, Stavros G. Drakos, Junichi Sadoshima, Junco S. Warren
PLoS One. 2020; 15(6): e0234913. Published online 2020 Jun 23. doi: 10.1371/journal.pone.0234913
PMCID:
PMC7310723
AbstractArticlePDF–2.7M
7.
Histone methyltransferase Smyd1 regulates mitochondrial energetics in the heart
Junco S. Warren, Christopher M. Tracy, Mickey R. Miller, Aman Makaju, Marta W. Szulik, Shin-ichi Oka, Tatiana N. Yuzyuk, James E. Cox, Anil Kumar, Bucky K. Lozier, Li Wang, June García Llana, Amira D. Sabry, Keiko M. Cawley, Dane W. Barton, Yong Hwan Han, Sihem Boudina, Oliver Fiehn, Haley O. Tucker, Alexey V. Zaitsev, Sarah Franklin
Proc Natl Acad Sci U S A. 2018 Aug 14; 115(33): E7871–E7880. Published online 2018 Jul 30. doi: 10.1073/pnas.1800680115
PMCID:
PMC6099878
AbstractArticlePDF–1.8M
8.
Gene expression profiling in the developing secondary palate in the absence of Tbx1 function
Maria Zoupa, Guilherme Machado Xavier, Stephanie Bryan, Ioannis Theologidis, Matthew Arno, Martyn T. Cobourne
BMC Genomics. 2018; 19: 429. Published online 2018 Jun 4. doi: 10.1186/s12864-018-4782-y
PMCID:
PMC5987606
AbstractArticlePDF–2.6M
9.
The chromatin-binding protein Smyd1 restricts adult mammalian heart growth
Sarah Franklin, Todd Kimball, Tara L. Rasmussen, Manuel Rosa-Garrido, Haodong Chen, Tam Tran, Mickey R. Miller, Ricardo Gray, Shanxi Jiang, Shuxun Ren, Yibin Wang, Haley O. Tucker, Thomas M. Vondriska
Am J Physiol Heart Circ Physiol. 2016 Nov 1; 311(5): H1234–H1247. Published online 2016 Sep 23. doi: 10.1152/ajpheart.00235.2016
PMCID:
PMC5130490
AbstractArticle
10.
The cardiac-restricted protein ADP-ribosylhydrolase-like 1 is essential for heart chamber outgrowth and acts on muscle actin filament assembly
Stuart J. Smith, Norma Towers, José W. Saldanha, Catherine A. Shang, S. Radma Mahmood, William R. Taylor, Timothy J. Mohun
Dev Biol. 2016 Aug 15; 416(2): 373–388. doi: 10.1016/j.ydbio.2016.05.006
PMCID:
PMC4990356
AbstractArticle
11.
Mouse myofibers lacking the SMYD1 methyltransferase are susceptible to atrophy, internalization of nuclei and myofibrillar disarray
M. David Stewart, Suhujey Lopez, Harika Nagandla, Benjamin Soibam, Ashley Benham, Jasmine Nguyen, Nicolas Valenzuela, Harry J. Wu, Alan R. Burns, Tara L. Rasmussen, Haley O. Tucker, Robert J. Schwartz
Dis Model Mech. 2016 Mar 1; 9(3): 347–359. doi: 10.1242/dmm.022491
PMCID:
PMC4833328
AbstractArticle
12.
Master redox regulator Trx1 upregulates SMYD1 & modulates lysine methylation
Tong Liu, Changgong Wu, Mohit Raja Jain, Narayani Nagarajan, Lin Yan, Huacheng Dai, Chuanlong Cui, Ahmet Baykal, Stacey Pan, Tetsuro Ago, Junichi Sadoshima, Hong Li
Biochim Biophys Acta. Author manuscript; available in PMC 2016 Mar 1.
Published in final edited form as: Biochim Biophys Acta. 2015 Dec; 1854(12): 1816–1822. Published online 2015 Sep 26. doi: 10.1016/j.bbapap.2015.09.006
PMCID:
PMC4721509
AbstractArticlePDF–370K
13.
Smyd1 Facilitates Heart Development by Antagonizing Oxidative and ER Stress Responses
Tara L. Rasmussen, Yanlin Ma, Chong Yon Park, June Harriss, Stephanie A. Pierce, Joseph D. Dekker, Nicolas Valenzuela, Deepak Srivastava, Robert J. Schwartz, M. David Stewart, Haley O. Tucker
PLoS One. 2015; 10(3): e0121765. Published online 2015 Mar 24. doi: 10.1371/journal.pone.0121765
PMCID:
PMC4372598
AbstractArticlePDF–12M
14.
Role of the ANKMY2-FKBP38 Axis in Regulation of the Sonic Hedgehog (Shh) Signaling Pathway
Shotaro Saita, Michiko Shirane, Tohru Ishitani, Nobuyuki Shimizu, Keiichi I. Nakayama
J Biol Chem. 2014 Sep 12; 289(37): 25639–25654. Published online 2014 Jul 30. doi: 10.1074/jbc.M114.558635
PMCID:
PMC4162168
AbstractArticlePDF–5.4M
15.
Oncogenic RAS directs silencing of tumor suppressor genes through ordered recruitment of transcriptional repressors
Narendra Wajapeyee, Sunil K. Malonia, Rajendra K. Palakurthy, Michael R. Green
Genes Dev. 2013 Oct 15; 27(20): 2221–2226. doi: 10.1101/gad.227413.113
PMCID:
PMC3814642
AbstractArticlePDF–1.0M
16.
The AERO System: A 3D-Like Approach for Recording Gene Expression Patterns in the Whole Mouse Embryo
Hirohito Shimizu, Atsushi Kubo, Kenta Uchibe, Megumi Hashimoto, Shigetoshi Yokoyama, Shuji Takada, Kazuhiko Mitsuoka, Hiroshi Asahara
PLoS One. 2013; 8(10): e75754. Published online 2013 Oct 16. doi: 10.1371/journal.pone.0075754
PMCID:
PMC3797748
AbstractArticlePDF–564K
17.
Age of Onset of RNA Toxicity Influences Phenotypic Severity: Evidence from an Inducible Mouse Model of Myotonic Dystrophy (DM1)
Jordan T. Gladman, Mahua Mandal, Varadamurthy Srinivasan, Mani S. Mahadevan
PLoS One. 2013; 8(9): e72907. Published online 2013 Sep 5. doi: 10.1371/journal.pone.0072907
PMCID:
PMC3764231
AbstractArticlePDF–1.7M
18.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
19.
A Systems Approach Reveals that the Myogenesis Genome Network Is Regulated by the Transcriptional Repressor RP58
Shigetoshi Yokoyama, Yoshiaki Ito, Hiroe Ueno-Kudoh, Hirohito Shimizu, Kenta Uchibe, Sonia Albini, Kazuhiko Mitsuoka, Shigeru Miyaki, Minako Kiso, Akane Nagai, Tomohiro Hikata, Tadahiro Osada, Noritsugu Fukuda, Satoshi Yamashita, Daisuke Harada, Valeria Mezzano, Masataka Kasai, Pier Lorenzo Puri, Yoshihide Hayashizaki, Haruo Okado, Megumi Hashimoto, Hiroshi Asahara
Dev Cell. Author manuscript; available in PMC 2011 Jun 7.
Published in final edited form as: Dev Cell. 2009 Dec; 17(6): 836–848. doi: 10.1016/j.devcel.2009.10.011
PMCID:
PMC3110151
AbstractArticlePDF–2.0M
20.
A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo
Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio
PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582
PMCID:
PMC3022534
AbstractArticlePDF–3.8M

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