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Select item 109457071.

Comparative interactome analysis of α-arrestin families in human and Drosophila

Kyung-Tae Lee, Inez KA Pranoto, Soon-Young Kim, Hee-Joo Choi, Ngoc Bao To, Hansong Chae, Jeong-Yeon Lee, Jung-Eun Kim, Young V Kwon, Jin-Wu Nam

eLife. 2024; 12: RP88328. Published online 2024 Jan 25. doi: 10.7554/eLife.88328

PMCID:: PMC10945707

Abstract Article PDF–2.8M

Select item 102024552.

The fat body cortical actin network regulates Drosophila inter-organ nutrient trafficking, signaling, and adipose cell size

Rupali Ugrankar-Banerjee, Son Tran, Jade Bowerman, Anastasiia Kovalenko, Blessy Paul, W Mike Henne

eLife. 2023; 12: e81170. Published online 2023 May 5. doi: 10.7554/eLife.81170

PMCID:: PMC10202455

Abstract Article PDF–16M

Select item 82794563.

The actin polymerization factor Diaphanous and the actin severing protein Flightless I collaborate to regulate Sarcomere Size

Su Deng, Ruth L. Silimon, Mridula Balakrishnan, Ingo Bothe, Devin Juros, David B. Soffar, Mary K. Baylies

Dev Biol. Author manuscript; available in PMC 2022 Jan 1.

Published in final edited form as: Dev Biol. 2021 Jan 1; 469: 12–25. Published online 2020 Sep 25. doi: 10.1016/j.ydbio.2020.09.014

PMCID:: PMC8279456

Abstract Article PDF–2.4M

Select item 73246444.

Integrating GWAS and Transcriptomics to Identify the Molecular Underpinnings of Thermal Stress Responses in Drosophila melanogaster

Melise C. Lecheta, David N. Awde, Thomas S. O’Leary, Laura N. Unfried, Nicholas A. Jacobs, Miles H. Whitlock, Eleanor McCabe, Beck Powers, Katie Bora, James S. Waters, Heather J. Axen, Seth Frietze, Brent L. Lockwood, Nicholas M. Teets, Sara H. Cahan

Front Genet. 2020; 11: 658. Published online 2020 Jun 23. doi: 10.3389/fgene.2020.00658

PMCID:: PMC7324644

Abstract Article PDF–1.8M

Select item 69615785.

CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans

Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang

Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119

PMCID:: PMC6961578

Abstract Article PDF–3.6M

Select item 68931966.

Identification of Genes Required for Apical Protein Trafficking in Drosophila Photoreceptor Cells

Azadeh Laffafian, Ulrich Tepass

G3 (Bethesda) 2019 Dec; 9(12): 4007–4017. Published online 2019 Oct 24. doi: 10.1534/g3.119.400635

PMCID:: PMC6893196

Abstract Article PDF–2.5M

Select item 64005517.

Complexin cooperates with Bruchpilot to tether synaptic vesicles to the active zone cytomatrix

Nicole Scholz, Nadine Ehmann, Divya Sachidanandan, Cordelia Imig, Benjamin H. Cooper, Olaf Jahn, Kerstin Reim, Nils Brose, Jutta Meyer, Marius Lamberty, Steffen Altrichter, Anne Bormann, Stefan Hallermann, Martin Pauli, Manfred Heckmann, Christian Stigloher, Tobias Langenhan, Robert J. Kittel

J Cell Biol. 2019 Mar 4; 218(3): 1011–1026. doi: 10.1083/jcb.201806155

PMCID:: PMC6400551

Abstract Article PDF–2.9M

Select item 57078058.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 56890029.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 530070110.

High throughput in vivo functional validation of candidate congenital heart disease genes in Drosophila

Jun-yi Zhu, Yulong Fu, Margaret Nettleton, Adam Richman, Zhe Han

eLife. 2017; 6: e22617. Published online 2017 Jan 20. doi: 10.7554/eLife.22617

PMCID:: PMC5300701

Abstract Article PDF–4.1M

Select item 488965811.

mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster

Gildas Lepennetier, Francesco Catania

G3 (Bethesda) 2016 Jun; 6(6): 1617–1626. Published online 2016 Mar 28. doi: 10.1534/g3.116.029231

PMCID:: PMC4889658

Abstract Article PDF–1.5M

Select item 473800512.

Proteome-wide dataset supporting the study of ancient metazoan macromolecular complexes

Sadhna Phanse, Cuihong Wan, Blake Borgeson, Fan Tu, Kevin Drew, Greg Clark, Xuejian Xiong, Olga Kagan, Julian Kwan, Alexandr Bezginov, Kyle Chessman, Swati Pal, Graham Cromar, Ophelia Papoulas, Zuyao Ni, Daniel R. Boutz, Snejana Stoilova, Pierre C. Havugimana, Xinghua Guo, Ramy H. Malty, Mihail Sarov, Jack Greenblatt, Mohan Babu, W. Brent Derry, Elisabeth R. Tillier, John B. Wallingford, John Parkinson, Edward M. Marcotte, Andrew Emili

Data Brief. 2016 Mar; 6: 715–721. Published online 2015 Dec 12. doi: 10.1016/j.dib.2015.11.062

PMCID:: PMC4738005

Abstract Article PDF–205K

Select item 452833013.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 452832914.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929

PMCID:: PMC4528329

Abstract Article PDF–4.9M

Select item 449405115.

The Recent De Novo Origin of Protein C-Termini

Matthew E. Andreatta, Joshua A. Levine, Scott G. Foy, Lynette D. Guzman, Luke J. Kosinski, Matthew H.J. Cordes, Joanna Masel

Genome Biol Evol. 2015 Jun; 7(6): 1686–1701. Published online 2015 May 21. doi: 10.1093/gbe/evv098

PMCID:: PMC4494051

Abstract Article PDF–767K

Select item 435288716.

The Release 6 reference sequence of the Drosophila melanogaster genome

Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker

Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114

PMCID:: PMC4352887

Abstract Article PDF–1022K

Select item 427152717.

Phylostratigraphic Bias Creates Spurious Patterns of Genome Evolution

Bryan A. Moyers, Jianzhi Zhang

Mol Biol Evol. 2015 Jan 1; 32(1): 258–267. Published online 2014 Oct 13. doi: 10.1093/molbev/msu286

Correction in:: Mol Biol Evol. 2016 Nov; 33(11): 3031.

PMCID:: PMC4271527

Abstract Article PDF–618K

Select item 420866718.

Combining Genetic Perturbations and Proteomics to Examine Kinase-Phosphatase Networks in Drosophila Embryos

Richelle Sopko, Marianna Foos, Arunachalam Vinayagam, Bo Zhai, Richard Binari, Yanhui Hu, Sakara Randklev, Lizabeth A. Perkins, Steven P. Gygi, Norbert Perrimon

Dev Cell. Author manuscript; available in PMC 2015 Oct 13.

Published in final edited form as: Dev Cell. 2014 Oct 13; 31(1): 114–127. Published online 2014 Oct 2. doi: 10.1016/j.devcel.2014.07.027

PMCID:: PMC4208667

Abstract Article PDF–2.4M

Select item 407405319.

Population Distribution Analyses Reveal a Hierarchy of Molecular Players Underlying Parallel Endocytic Pathways

Gagan D. Gupta, Gautam Dey, Swetha MG, Balaji Ramalingam, Khader Shameer, Joseph Jose Thottacherry, Joseph Mathew Kalappurakkal, Mark T. Howes, Ruma Chandran, Anupam Das, Sindhu Menon, Robert G. Parton, R. Sowdhamini, Mukund Thattai, Satyajit Mayor

PLoS One. 2014; 9(6): e100554. Published online 2014 Jun 27. doi: 10.1371/journal.pone.0100554

Correction in:: PLoS One. 2018; 13(9): e0204770.

PMCID:: PMC4074053

Abstract Article PDF–2.6M

Select item 353067720.

High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression

Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras

Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112

PMCID:: PMC3530677

Abstract Article PDF–1.5M

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