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Items: 20

1.
Inhibition of glycine cleavage system by pyridoxine 5′-phosphate causes synthetic lethality in glyA yggS and serA yggS in Escherichia coli
Tomokazu Ito, Ran Hori, Hisashi Hemmi, Diana M. Downs, Tohru Yoshimura
Mol Microbiol. Author manuscript; available in PMC 2021 Jan 1.
Published in final edited form as: Mol Microbiol. 2020 Jan; 113(1): 270–284. Published online 2019 Nov 24. doi: 10.1111/mmi.14415
PMCID:
PMC7060791
ArticlePDF–1.1M
2.
TRANSIENT KINETIC ANALYSIS OF L-SERINE INTERACTION WITH E. COLI D-3-PHOSPHOGLYCERATE DEHYDROGENASE CONTAINING AMINO ACID MUTATIONS IN THE HINGE REGIONS
Gregory A. Grant
Biochemistry. Author manuscript; available in PMC 2012 Apr 12.
Published in final edited form as: Biochemistry. 2011 Apr 12; 50(14): 2900–2906. Published online 2011 Mar 22. doi: 10.1021/bi200211z
PMCID:
PMC3071459
ArticlePDF–1.3M
3.
TRANSIENT KINETIC ANALYSIS OF L-SERINE INTERACTION WITH E. COLI D-3-PHOSPHOGLYCERATE DEHYDROGENASE REVEALS THE MECHANISM OF V-TYPE REGULATION AND THE ORDER OF EFFECTOR BINDING
Rodney L. Burton, Shawei Chen, Xiao Lan Xu, Gregory A. Grant
Biochemistry. Author manuscript; available in PMC 2010 Dec 29.
Published in final edited form as: Biochemistry. 2009 Dec 29; 48(51): 12242–12251. doi: 10.1021/bi901489n
PMCID:
PMC2797576
ArticlePDF–1.5M
4.
A Stopped Flow Transient Kinetic Analysis of Substrate Binding and Catalysis in Escherichia colid-3-Phosphoglycerate Dehydrogenase
Rodney L. Burton, Jeremiah W. Hanes, Gregory A. Grant
J Biol Chem. 2008 Oct 31; 283(44): 29706–29714. doi: 10.1074/jbc.M805180200
PMCID:
PMC2573093
ArticlePDF–708K
5.
Identification of Amino Acid Residues Contributing to the Mechanism of Cooperativity in E. coli D-3-Phosphoglycerate Dehydrogenase
Gregory A. Grant, Zhiqin Hu, Xiao Lan Xu
Biochemistry. Author manuscript; available in PMC 2008 Sep 5.
Published in final edited form as: Biochemistry. 2005 Dec 27; 44(51): 16844–16852. doi: 10.1021/bi051681j
PMCID:
PMC2530893
ArticlePDF–3.6M
6.
Protein abundance profiling of the Escherichia coli cytosol
Yasushi Ishihama, Thorsten Schmidt, Juri Rappsilber, Matthias Mann, F Ulrich Hartl, Michael J Kerner, Dmitrij Frishman
BMC Genomics. 2008; 9: 102. Published online 2008 Feb 27. doi: 10.1186/1471-2164-9-102
PMCID:
PMC2292177
ArticlePDF–1.0M
7.
The relationship between effector binding and inhibition of activity in D-3-phosphoglycerate dehydrogenase.
G. A. Grant, X. L. Xu, Z. Hu
Protein Sci. 1999 Nov; 8(11): 2501–2505. doi: 10.1110/ps.8.11.2501
PMCID:
PMC2144197
SummaryPDF–217K
8.
A model for the regulation of D-3-phosphoglycerate dehydrogenase, a Vmax-type allosteric enzyme.
G. A. Grant, D. J. Schuller, L. J. Banaszak
Protein Sci. 1996 Jan; 5(1): 34–41. doi: 10.1002/pro.5560050105
PMCID:
PMC2143248
SummaryPDF–4.9M
9.
Experimental and Computational Assessment of Conditionally Essential Genes in Escherichia coli
Andrew R. Joyce, Jennifer L. Reed, Aprilfawn White, Robert Edwards, Andrei Osterman, Tomoya Baba, Hirotada Mori, Scott A. Lesely, Bernhard Ø. Palsson, Sanjay Agarwalla
J Bacteriol. 2006 Dec; 188(23): 8259–8271. Published online 2006 Sep 29. doi: 10.1128/JB.00740-06
PMCID:
PMC1698209
ArticlePDF–779K
10.
Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110
Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi
Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049
PMCID:
PMC1681481
ArticlePDF–141K
11.
Generating Tetracycline-Inducible Auxotrophy in Escherichia coli and Salmonella enterica Serovar Typhimurium by Using an Insertion Element and a Hyperactive Transposase
Martin Köstner, Britta Schmidt, Ralph Bertram, Wolfgang Hillen
Appl Environ Microbiol. 2006 Jul; 72(7): 4717–4725. doi: 10.1128/AEM.00492-06
PMCID:
PMC1489314
ArticlePDF–329K
12.
Escherichia coli K-12: a cooperatively developed annotation snapshot—2005
Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner
Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405
PMCID:
PMC1325200
ArticlePDF–204K
13.
The leucine-responsive regulatory protein, a global regulator of metabolism in Escherichia coli.
J M Calvo, R G Matthews
Microbiol Rev. 1994 Sep; 58(3): 466–490. doi: 10.1128/mr.58.3.466-490.1994
PMCID:
PMC372976
ArticlePDF–5.6M
14.
BIOSYNTHESIS OF SERINE IN ESCHERICHIA COLI AND SALMONELLA TYPHIMURIUM
H. E. Umbarger, Merle A. Umbarger, Patrick M. L. Siu
J Bacteriol. 1963 Jun; 85(6): 1431–1439. doi: 10.1128/jb.85.6.1431-1439.1963
PMCID:
PMC278352
ArticlePDF–1.2M
15.
Biochemical Bases for the Antimetabolite Action of l-Serine Hydroxamate
Tetsuya Tosa, Lewis I. Pizer
J Bacteriol. 1971 Jun; 106(3): 972–982. doi: 10.1128/jb.106.3.972-982.1971
PMCID:
PMC248741
ArticlePDF–1.3M
16.
The leucine regulon of Escherichia coli K-12: a mutation in rblA alters expression of L-leucine-dependent metabolic operons.
L R Tuan, R D'Ari, E B Newman
J Bacteriol. 1990 Aug; 172(8): 4529–4535. doi: 10.1128/jb.172.8.4529-4535.1990
PMCID:
PMC213284
ArticlePDF–1.5M
17.
Genetic characterization of a highly efficient alternate pathway of serine biosynthesis in Escherichia coli.
P D Ravnikar, R L Somerville
J Bacteriol. 1987 Jun; 169(6): 2611–2617. doi: 10.1128/jb.169.6.2611-2617.1987
PMCID:
PMC212135
ArticlePDF–1.4M
18.
Physical locations of bglA and serA on the Escherichia coli K-12 chromosome.
K O'Day, J Lopilato, A Wright
J Bacteriol. 1991 Mar; 173(5): 1571. doi: 10.1128/jb.173.5.1571.1991
PMCID:
PMC207303
ArticlePDF–89K
19.
Factors Influencing the Identification of Transcription Factor Binding Sites by Cross-Species Comparison
Lee Ann McCue, William Thompson, C. Steven Carmack, Charles E. Lawrence
Genome Res. 2002 Oct; 12(10): 1523–1532. doi: 10.1101/gr.323602
PMCID:
PMC187528
ArticlePDF–192K
20.
A novel alpha-ketoglutarate reductase activity of the serA-encoded 3-phosphoglycerate dehydrogenase of Escherichia coli K-12 and its possible implications for human 2-hydroxyglutaric aciduria.
G Zhao, M E Winkler
J Bacteriol. 1996 Jan; 178(1): 232–239. doi: 10.1128/jb.178.1.232-239.1996
PMCID:
PMC177644
SummaryPDF–273K

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