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Items: 1 to 20 of 26

1.
BRCA1 and 53BP1 Regulate Reprogramming Efficiency by Mediating DNA Repair Pathway Choice at Replication-associated Double-Strand Breaks
Daniela Georgieva, Ning Wang, Angelo Taglialatela, Stepan Jerabek, Colleen R. Reczek, Pei Xin Lim, Julie Sung, Qian Du, Michiko Horiguchi, Maria Jasin, Alberto Ciccia, Richard Baer, Dieter Egli
Cell Rep. Author manuscript; available in PMC 2024 Jul 25.
Published in final edited form as: Cell Rep. 2024 Apr 23; 43(4): 114006. Published online 2024 Mar 30. doi: 10.1016/j.celrep.2024.114006
PMCID:
PMC11272184
AbstractArticlePDF–2.7M
2.
Genetic determinants of micronucleus formation in vivo
D. J. Adams, B. Barlas, R. E. McIntyre, I. Salguero, L. van der Weyden, A. Barros, J. R. Vicente, N. Karimpour, A. Haider, M. Ranzani, G. Turner, N. A. Thompson, V. Harle, R. Olvera-León, C. D. Robles-Espinoza, A. O. Speak, N. Geisler, W. J. Weninger, S. H. Geyer, J. Hewinson, N. A. Karp, The Sanger Mouse Genetics Project, B. Fu, F. Yang, Z. Kozik, J. Choudhary, L. Yu, M. S. van Ruiten, B. D. Rowland, C. J. Lelliott, M. del Castillo Velasco-Herrera, R. Verstraten, L. Bruckner, A. G. Henssen, M. A. Rooimans, J. de Lange, T. J. Mohun, M. J. Arends, K. A. Kentistou, P. A. Coelho, Y. Zhao, H. Zecchini, J. R. B. Perry, S. P. Jackson, G. Balmus
Nature. 2024; 627(8002): 130–136. Published online 2024 Feb 14. doi: 10.1038/s41586-023-07009-0
PMCID:
PMC10917660
AbstractArticlePDF–4.8M
3.
Chromatin regulator SMARCAL1 modulates cellular lipid metabolism
Taylor Hanta Nagai, Chrissy Hartigan, Taiji Mizoguchi, Haojie Yu, Amy Deik, Kevin Bullock, Yanyan Wang, Debra Cromley, Monica Schenone, Chad A. Cowan, Daniel J. Rader, Clary B. Clish, Steven A. Carr, Yu-Xin Xu
Commun Biol. 2023; 6: 1298. Published online 2023 Dec 21. doi: 10.1038/s42003-023-05665-6
PMCID:
PMC10739977
AbstractArticlePDF–6.7M
4.
Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development
Francesco Bedogni, Robert F. Hevner
Front Mol Neurosci. 2021; 14: 686034. Published online 2021 Jul 12. doi: 10.3389/fnmol.2021.686034
PMCID:
PMC8313239
AbstractArticlePDF–1.6M
5.
BraInMap elucidates the macromolecular connectivity landscape of mammalian brain
Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili
Cell Syst. Author manuscript; available in PMC 2021 Apr 22.
Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003
Correction in:
Cell Syst. 2020 Aug 26; 11(2): 208.
PMCID:
PMC7938770
AbstractArticlePDF–2.0M
6.
Mouse screen reveals multiple new genes underlying mouse and human hearing loss
Neil J. Ingham, Selina A. Pearson, Valerie E. Vancollie, Victoria Rook, Morag A. Lewis, Jing Chen, Annalisa Buniello, Elisa Martelletti, Lorenzo Preite, Chi Chung Lam, Felix D. Weiss, Zӧe Powis, Pim Suwannarat, Christopher J. Lelliott, Sally J. Dawson, Jacqueline K. White, Karen P. Steel
PLoS Biol. 2019 Apr; 17(4): e3000194. Published online 2019 Apr 11. doi: 10.1371/journal.pbio.3000194
PMCID:
PMC6459510
AbstractArticlePDF–5.1M
7.
Smarcal1 and Zranb3 protect replication forks from Myc-induced DNA replication stress
Matthew V. Puccetti, Clare M. Adams, Saul Kushinsky, Christine M. Eischen
Cancer Res. Author manuscript; available in PMC 2020 Apr 1.
Published in final edited form as: Cancer Res. 2019 Apr 1; 79(7): 1612–1623. Published online 2019 Jan 4. doi: 10.1158/0008-5472.CAN-18-2705
PMCID:
PMC6445766
AbstractArticlePDF–2.4M
8.
The Epigenetic Factor Landscape of Developing Neocortex Is Regulated by Transcription Factors Pax6→ Tbr2→ Tbr1
Gina E. Elsen, Francesco Bedogni, Rebecca D. Hodge, Theo K. Bammler, James W. MacDonald, Susan Lindtner, John L. R. Rubenstein, Robert F. Hevner
Front Neurosci. 2018; 12: 571. Published online 2018 Aug 22. doi: 10.3389/fnins.2018.00571
PMCID:
PMC6113890
AbstractArticlePDF–4.8M
9.
Defective replication stress response inhibits lymphomagenesis and impairs lymphocyte reconstitution
Matthew V. Puccetti, Melissa A. Fischer, Maria Pia Arrate, Kelli L. Boyd, Robert J. Duszynski, Rémy Bétous, David Cortez, Christine M. Eischen
Oncogene. Author manuscript; available in PMC 2017 Aug 21.
Published in final edited form as: Oncogene. 2017 May 4; 36(18): 2553–2564. Published online 2016 Oct 31. doi: 10.1038/onc.2016.408
PMCID:
PMC5562353
AbstractArticlePDF–1014K
10.
SMARCAL1 maintains telomere integrity during DNA replication
Lisa A. Poole, Runxiang Zhao, Gloria G. Glick, Courtney A. Lovejoy, Christine M. Eischen, David Cortez
Proc Natl Acad Sci U S A. 2015 Dec 1; 112(48): 14864–14869. Published online 2015 Nov 17. doi: 10.1073/pnas.1510750112
PMCID:
PMC4672769
AbstractArticlePDF–1.1M
11.
Insights into the Renal Pathogenesis in Schimke Immuno-Osseous Dysplasia: A Renal Histological Characterization and Expression Analysis
Sanjay Sarin, Ashkan Javidan, Felix Boivin, Iakovina Alexopoulou, Dusan Lukic, Bruno Svajger, Stephanie Chu, Alireza Baradaran-Heravi, Cornelius F. Boerkoel, Norman D. Rosenblum, Darren Bridgewater
J Histochem Cytochem. 2015 Jan; 63(1): 32–44. doi: 10.1369/0022155414558335
PMCID:
PMC4395996
AbstractArticlePDF–1.4M
12.
A structure-specific nucleic acid-binding domain conserved among DNA repair proteins
Aaron C. Mason, Robert P. Rambo, Briana Greer, Michael Pritchett, John A. Tainer, David Cortez, Brandt F. Eichman
Proc Natl Acad Sci U S A. 2014 May 27; 111(21): 7618–7623. Published online 2014 May 12. doi: 10.1073/pnas.1324143111
PMCID:
PMC4040553
AbstractArticlePDF–982K
13.
Fine-mapping quantitative trait loci affecting murine external ear tissue regeneration in the LG/J by SM/J advanced intercross line
J M Cheverud, H A Lawson, K Bouckaert, A V Kossenkov, L C Showe, L Cort, E P Blankenhorn, K Bedelbaeva, D Gourevitch, Y Zhang, E Heber-Katz
Heredity (Edinb) 2014 May; 112(5): 508–518. Published online 2014 Feb 26. doi: 10.1038/hdy.2013.133
PMCID:
PMC3998788
AbstractArticlePDF–1.8M
14.
A conditional knockout resource for the genome–wide study of mouse gene function
William C. Skarnes, Barry Rosen, Anthony P. West, Manousos Koutsourakis, Wendy Bushell, Vivek Iyer, Alejandro O. Mujica, Mark Thomas, Jennifer Harrow, Tony Cox, David Jackson, Jessica Severin, Patrick Biggs, Jun Fu, Michael Nefedov, Pieter J. de Jong, A. Francis Stewart, Allan Bradley
Nature. Author manuscript; available in PMC 2013 Feb 14.
Published in final edited form as: Nature. 2011 Jun 15; 474(7351): 337–342. Published online 2011 Jun 15. doi: 10.1038/nature10163
PMCID:
PMC3572410
AbstractArticlePDF–1.1M
15.
SMARCAL1 Deficiency Predisposes to Non-Hodgkin Lymphoma and Hypersensitivity to Genotoxic Agents In vivo
Alireza Baradaran-Heravi, Anja Raams, Joanna Lubieniecka, Kyoung Sang Cho, Kristi A. DeHaai, Mitra Basiratnia, Pierre-Olivier Mari, Yutong Xue, Michael Rauth, Ann Haskins Olney, Mary Shago, Kunho Choi, Rosanna A. Weksberg, Malgorzata J.M. Nowaczyk, Weidong Wang, Nicolaas G.J. Jaspers, Cornelius F. Boerkoel
Am J Med Genet A. Author manuscript; available in PMC 2013 Sep 1.
Published in final edited form as: Am J Med Genet A. 2012 Sep; 158A(9): 2204–2213. Published online 2012 Aug 7. doi: 10.1002/ajmg.a.35532
PMCID:
PMC3429644
AbstractArticlePDF–1.9M
16.
Penetrance of biallelic SMARCAL1 mutations is associated with environmental and genetic disturbances of gene expression
Alireza Baradaran-Heravi, Kyoung Sang Cho, Bas Tolhuis, Mrinmoy Sanyal, Olena Morozova, Marie Morimoto, Leah I. Elizondo, Darren Bridgewater, Joanna Lubieniecka, Kimberly Beirnes, Clara Myung, Danny Leung, Hok Khim Fam, Kunho Choi, Yan Huang, Kira Y. Dionis, Jonathan Zonana, Kory Keller, Peter Stenzel, Christy Mayfield, Thomas Lücke, Arend Bokenkamp, Marco A. Marra, Maarten van Lohuizen, David B. Lewis, Chad Shaw, Cornelius F. Boerkoel
Hum Mol Genet. 2012 Jun 1; 21(11): 2572–2587. Published online 2012 Feb 28. doi: 10.1093/hmg/dds083
PMCID:
PMC3349428
AbstractArticlePDF–797K
17.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
18.
The annealing helicase SMARCAL1 maintains genome integrity at stalled replication forks
Carol E. Bansbach, Rémy Bétous, Courtney A. Lovejoy, Gloria G. Glick, David Cortez
Genes Dev. 2009 Oct 15; 23(20): 2405–2414. doi: 10.1101/gad.1839909
PMCID:
PMC2764496
AbstractArticlePDF–779K
19.
The annealing helicase HARP is recruited to DNA repair sites via an interaction with RPA
Timur Yusufzai, Xiangduo Kong, Kyoko Yokomori, James T. Kadonaga
Genes Dev. 2009 Oct 15; 23(20): 2400–2404. doi: 10.1101/gad.1831509
PMCID:
PMC2764493
AbstractArticlePDF–473K
20.
Large-scale gene trapping in C57BL/6N mouse embryonic stem cells
Gwenn M. Hansen, Diane C. Markesich, Michael B. Burnett, Qichao Zhu, Karen M. Dionne, Lizabeth J. Richter, Richard H. Finnell, Arthur T. Sands, Brian P. Zambrowicz, Alejandro Abuin
Genome Res. 2008 Oct; 18(10): 1670–1679. doi: 10.1101/gr.078352.108
PMCID:
PMC2556270
AbstractArticlePDF–493K

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