PMC Links for GEO Profiles (Select 25643324) - PMC

Select item 83311671.

The histone variant H3.3 promotes the active chromatin state to repress flowering in Arabidopsis

Fengyue Zhao, Huairen Zhang, Ting Zhao, Zicong Li, Danhua Jiang

Plant Physiol. 2021 Aug; 186(4): 2051–2063. Published online 2021 May 10. doi: 10.1093/plphys/kiab224

PMCID:: PMC8331167

Select item 72970452.

A pan-plant protein complex map reveals deep conservation and novel assemblies

Claire D. McWhite, Ophelia Papoulas, Kevin Drew, Rachael M. Cox, Viviana June, Oliver Xiaoou Dong, Taejoon Kwon, Cuihong Wan, Mari L. Salmi, Stanley J. Roux, Jr., Karen S. Browning, Z. Jeffrey Chen, Pamela C. Ronald, Edward M. Marcotte

Cell. Author manuscript; available in PMC 2021 Apr 16.

Published in final edited form as: Cell. 2020 Apr 16; 181(2): 460–474.e14. Published online 2020 Mar 18. doi: 10.1016/j.cell.2020.02.049

PMCID:: PMC7297045

Abstract Article PDF–4.0M

Select item 56720033.

Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling

Zachary McBride, Donglai Chen, Christy Reick, Jun Xie, Daniel B. Szymanski

Mol Cell Proteomics. 2017 Nov; 16(11): 1972–1989. Published online 2017 Sep 8. doi: 10.1074/mcp.RA117.000276

PMCID:: PMC5672003

Abstract Article PDF–3.5M

Select item 54376784.

The histone H3 variant H3.3 regulates gene body DNA methylation in Arabidopsis thaliana

Heike Wollmann, Hume Stroud, Ramesh Yelagandula, Yoshiaki Tarutani, Danhua Jiang, Li Jing, Bhagyshree Jamge, Hidenori Takeuchi, Sarah Holec, Xin Nie, Tetsuji Kakutani, Steven E. Jacobsen, Frédéric Berger

Genome Biol. 2017; 18: 94. Published online 2017 May 18. doi: 10.1186/s13059-017-1221-3

PMCID:: PMC5437678

Abstract Article PDF–2.9M

Select item 47973105.

Delineation of metabolic gene clusters in plant genomes by chromatin signatures

Nan Yu, Hans-Wilhelm Nützmann, James T. MacDonald, Ben Moore, Ben Field, Souha Berriri, Martin Trick, Susan J. Rosser, S. Vinod Kumar, Paul S. Freemont, Anne Osbourn

Nucleic Acids Res. 2016 Mar 18; 44(5): 2255–2265. Published online 2016 Feb 18. doi: 10.1093/nar/gkw100

PMCID:: PMC4797310

Abstract Article PDF–3.1M

Select item 41636566.

The HIRA complex that deposits the histone H3.3 is conserved in Arabidopsis and facilitates transcriptional dynamics

Xin Nie, Haifeng Wang, Jing Li, Sarah Holec, Frédéric Berger

Biol Open. 2014 Sep 15; 3(9): 794–802. Published online 2014 Aug 1. doi: 10.1242/bio.20148680

PMCID:: PMC4163656

Abstract Article PDF–868K

Select item 41271227.

Mechanism of DNA methylation-directed histone methylation by KRYPTONITE

Jiamu Du, Lianna M. Johnson, Martin Groth, Suhua Feng, Christopher J. Hale, Sisi Li, Ajay A. Vashisht, James A. Wohlschlegel, Dinshaw J. Patel, Steven E. Jacobsen

Mol Cell. Author manuscript; available in PMC 2015 Aug 7.

Published in final edited form as: Mol Cell. 2014 Aug 7; 55(3): 495–504. Published online 2014 Jul 10. doi: 10.1016/j.molcel.2014.06.009

PMCID:: PMC4127122

Abstract Article PDF–1.6M

Select item 40546748.

Arabidopsis replacement histone variant H3.3 occupies promoters of regulated genes

Huan Shu, Miyuki Nakamura, Alexey Siretskiy, Lorenzo Borghi, Izabel Moraes, Thomas Wildhaber, Wilhelm Gruissem, Lars Hennig

Genome Biol. 2014; 15(4): R62. Published online 2014 Mar 21. doi: 10.1186/gb-2014-15-4-r62

PMCID:: PMC4054674

Abstract Article PDF–1.3M

Select item 38451789.

Arabidopsis thaliana AHL family modulates hypocotyl growth redundantly by interacting with each other via the PPC/DUF296 domain

Jianfei Zhao, David S. Favero, Hao Peng, Michael M. Neff

Proc Natl Acad Sci U S A. 2013 Nov 26; 110(48): E4688–E4697. Published online 2013 Nov 11. doi: 10.1073/pnas.1219277110

PMCID:: PMC3845178

Abstract Article PDF–1.4M

Select item 320280310.

Arabidopsis G-protein interactome reveals connections to cell wall carbohydrates and morphogenesis

Karsten Klopffleisch, Nguyen Phan, Kelsey Augustin, Robert S Bayne, Katherine S Booker, Jose R Botella, Nicholas C Carpita, Tyrell Carr, Jin-Gui Chen, Thomas Ryan Cooke, Arwen Frick-Cheng, Erin J Friedman, Brandon Fulk, Michael G Hahn, Kun Jiang, Lucia Jorda, Lydia Kruppe, Chenggang Liu, Justine Lorek, Maureen C McCann, Antonio Molina, Etsuko N Moriyama, M Shahid Mukhtar, Yashwanti Mudgil, Sivakumar Pattathil, John Schwarz, Steven Seta, Matthew Tan, Ulrike Temp, Yuri Trusov, Daisuke Urano, Bastian Welter, Jing Yang, Ralph Panstruga, Joachim F Uhrig, Alan M Jones

Mol Syst Biol. 2011; 7: 532. Published online 2011 Sep 27. doi: 10.1038/msb.2011.66

PMCID:: PMC3202803

Abstract Article PDF–1.3M

Select item 275431611.

ATXR5 and ATXR6 are novel H3K27 monomethyltransferases required for chromatin structure and gene silencing

Yannick Jacob, Suhua Feng, Chantal A. LeBlanc, Yana V. Bernatavichute, Hume Stroud, Shawn Cokus, Lianna M. Johnson, Matteo Pellegrini, Steven E. Jacobsen, Scott D. Michaels

Nat Struct Mol Biol. Author manuscript; available in PMC 2010 Jan 1.

Published in final edited form as: Nat Struct Mol Biol. 2009 Jul; 16(7): 763–768. Published online 2009 Jun 7. doi: 10.1038/nsmb.1611

PMCID:: PMC2754316

Abstract Article PDF–896K

Select item 147290312.

Erasure of histone acetylation by Arabidopsis HDA6 mediates large-scale gene silencing in nucleolar dominance

Keith Earley, Richard J. Lawrence, Olga Pontes, Rachel Reuther, Angel J. Enciso, Manuela Silva, Nuno Neves, Michael Gross, Wanda Viegas, Craig S. Pikaard

Genes Dev. 2006 May 15; 20(10): 1283–1293. doi: 10.1101/gad.1417706

PMCID:: PMC1472903

Abstract Article PDF–738K

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