PMC Links for GEO Profiles (Select 24888377) - PMC

Hong-Wen Tang, Kerstin Spirohn, Yanhui Hu, Tong Hao, István A. Kovács, Yue Gao, Richard Binari, Donghui Yang-Zhou, Kenneth H. Wan, Joel S. Bader, Dawit Balcha, Wenting Bian, Benjamin W. Booth, Atina G. Coté, Steffi de Rouck, Alice Desbuleux, Kah Yong Goh, Dae-Kyum Kim, Jennifer J. Knapp, Wen Xing Lee, Irma Lemmens, Cathleen Li, Mian Li, Roujia Li, Hyobin Julianne Lim, Yifang Liu, Katja Luck, Dylan Markey, Carl Pollis, Sudharshan Rangarajan, Jonathan Rodiger, Sadie Schlabach, Yun Shen, Dayag Sheykhkarimli, Bridget TeeKing, Frederick P. Roth, Jan Tavernier, Michael A. Calderwood, David E. Hill, Susan E. Celniker, Marc Vidal, Norbert Perrimon, Stephanie E. Mohr

Nat Commun. 2023; 14: 2162. Published online 2023 Apr 15. doi: 10.1038/s41467-023-37876-0

PMCID:: PMC10105736

Abstract Article PDF–3.2M

Select item 95319455.

The Drosophila ZAD zinc finger protein Kipferl guides Rhino to piRNA clusters

Lisa Baumgartner, Dominik Handler, Sebastian Wolfgang Platzer, Changwei Yu, Peter Duchek, Julius Brennecke

eLife. 2022; 11: e80067. Published online 2022 Oct 4. doi: 10.7554/eLife.80067

PMCID:: PMC9531945

Abstract Article PDF–14M

Select item 87334206.

A genetic toolkit for studying transposon control in the Drosophila melanogaster ovary

Mostafa F ElMaghraby, Laszlo Tirian, Kirsten-André Senti, Katharina Meixner, Julius Brennecke

Genetics. 2022 Jan; 220(1): iyab179. Published online 2021 Oct 30. doi: 10.1093/genetics/iyab179

PMCID:: PMC8733420

Abstract Article PDF–3.3M

Select item 76011717.

Diverse Defenses: A Perspective Comparing Dipteran Piwi-piRNA Pathways

Stephanie Gamez, Satyam Srivastav, Omar S. Akbari, Nelson C. Lau

Cells. 2020 Oct; 9(10): 2180. Published online 2020 Sep 27. doi: 10.3390/cells9102180

PMCID:: PMC7601171

Abstract Article PDF–2.4M

Select item 69744058.

The piRNA pathway in Drosophila ovarian germ and somatic cells

Kaoru SATO, Mikiko C. SIOMI

Proc Jpn Acad Ser B Phys Biol Sci. 2020 Jan 10; 96(1): 32–42. doi: 10.2183/pjab.96.003

PMCID:: PMC6974405

Abstract Article PDF–2.3M

Select item 67196149.

Specialization of the Drosophila nuclear export family protein Nxf3 for piRNA precursor export

Emma Kneuss, Marzia Munafò, Evelyn L. Eastwood, Undine-Sophie Deumer, Jonathan B. Preall, Gregory J. Hannon, Benjamin Czech

Genes Dev. 2019 Sep 1; 33(17-18): 1208–1220. doi: 10.1101/gad.328690.119

PMCID:: PMC6719614

Abstract Article PDF–19M

Select item 600407210.

A length-dependent evolutionarily conserved pathway controls nuclear export of circular RNAs

Chuan Huang, Dongming Liang, Deirdre C. Tatomer, Jeremy E. Wilusz

Genes Dev. 2018 May 1; 32(9-10): 639–644. doi: 10.1101/gad.314856.118

PMCID:: PMC6004072

Abstract Article PDF–678K

Select item 570780511.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 568900212.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 468787913.

The microtubule catastrophe promoter Sentin delays stable kinetochore–microtubule attachment in oocytes

A. Agata Głuszek, C. Fiona Cullen, Wenjing Li, Rachel A. Battaglia, Sarah J. Radford, Mariana F. Costa, Kim S. McKim, Gohta Goshima, Hiroyuki Ohkura

J Cell Biol. 2015 Dec 21; 211(6): 1113–1120. doi: 10.1083/jcb.201507006

PMCID:: PMC4687879

Abstract Article PDF–1.9M

Select item 452833014.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 452832915.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929

PMCID:: PMC4528329

Abstract Article PDF–4.9M

Select item 435288716.

The Release 6 reference sequence of the Drosophila melanogaster genome

Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker

Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114