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Items: 1 to 20 of 38

1.
Comparative interactome analysis of α-arrestin families in human and Drosophila
Kyung-Tae Lee, Inez KA Pranoto, Soon-Young Kim, Hee-Joo Choi, Ngoc Bao To, Hansong Chae, Jeong-Yeon Lee, Jung-Eun Kim, Young V Kwon, Jin-Wu Nam
eLife. 2024; 12: RP88328. Published online 2024 Jan 25. doi: 10.7554/eLife.88328
PMCID:
PMC10945707
AbstractArticlePDF–2.8M
2.
Proximity labeling reveals a new in vivo network of interactors for the histone demethylase KDM5
Matanel Yheskel, Simone Sidoli, Julie Secombe
Epigenetics Chromatin. 2023; 16: 8. Published online 2023 Feb 18. doi: 10.1186/s13072-023-00481-y
PMCID:
PMC9938590
AbstractArticlePDF–4.8M
3.
The disease-associated proteins Drosophila Nab2 and Ataxin-2 interact with shared RNAs and coregulate neuronal morphology
J Christopher Rounds, Edwin B Corgiat, Changtian Ye, Joseph A Behnke, Seth M Kelly, Anita H Corbett, Kenneth H Moberg
Genetics. 2022 Jan; 220(1): iyab175. Published online 2022 Jan 3. doi: 10.1093/genetics/iyab175
PMCID:
PMC8733473
AbstractArticlePDF–2.4M
4.
Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes
Ana López-Varea, Patricia Vega-Cuesta, Ana Ruiz-Gómez, Cristina M Ostalé, Cristina Molnar, Covadonga F Hevia, Mercedes Martín, Maria F Organista, Jesus de Celis, Joaquín Culí, Nuria Esteban, Jose F de Celis
G3 (Bethesda) 2021 Dec; 11(12): jkab349. Published online 2021 Oct 2. doi: 10.1093/g3journal/jkab349
PMCID:
PMC8664486
AbstractArticlePDF–3.1M
5.
A SuperFamily-Wide Activity Atlas of Serine Hydrolases in Drosophila Melanogaster
Kundan Kumar, Amol Mhetre, Girish S. Ratnaparkhi, Siddhesh S. Kamat
Biochemistry. Author manuscript; available in PMC 2021 Oct 27.
Published in final edited form as: Biochemistry. 2021 Apr 27; 60(16): 1312–1324. Published online 2021 Apr 7. doi: 10.1021/acs.biochem.1c00171
PMCID:
PMC7610703
AbstractArticlePDF–1.7M
6.
Evolutionary conserved NSL complex/BRD4 axis controls transcription activation via histone acetylation
Aline Gaub, Bilal N. Sheikh, M. Felicia Basilicata, Marie Vincent, Mathilde Nizon, Cindy Colson, Matthew J. Bird, James E. Bradner, Julien Thevenon, Michael Boutros, Asifa Akhtar
Nat Commun. 2020; 11: 2243. Published online 2020 May 7. doi: 10.1038/s41467-020-16103-0
PMCID:
PMC7206058
AbstractArticlePDF–4.4M
7.
CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans
Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang
Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119
PMCID:
PMC6961578
AbstractArticlePDF–3.6M
8.
RNAi-mediated depletion of the NSL complex subunits leads to abnormal chromosome segregation and defective centrosome duplication in Drosophila mitosis
Gera A. Pavlova, Julia V. Popova, Evgeniya N. Andreyeva, Lyubov A. Yarinich, Mikhail O. Lebedev, Alyona V. Razuvaeva, Tatiana D. Dubatolova, Anastasiya L. Oshchepkova, Claudia Pellacani, Maria Patrizia Somma, Alexey V. Pindyurin, Maurizio Gatti
PLoS Genet. 2019 Sep; 15(9): e1008371. Published online 2019 Sep 17. doi: 10.1371/journal.pgen.1008371
PMCID:
PMC6772098
AbstractArticlePDF–3.2M
9.
The NSL complex-mediated nucleosome landscape is required to maintain transcription fidelity and suppression of transcription noise
Kin Chung Lam, Ho-Ryun Chung, Giuseppe Semplicio, Shantanu S. Iyer, Aline Gaub, Vivek Bhardwaj, Herbert Holz, Plamen Georgiev, Asifa Akhtar
Genes Dev. 2019 Apr 1; 33(7-8): 452–465. doi: 10.1101/gad.321489.118
PMCID:
PMC6446542
AbstractArticlePDF–20M
10.
Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species
Piero Sanfilippo, Jiayu Wen, Eric C. Lai
Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0
PMCID:
PMC5707805
AbstractArticlePDF–3.2M
11.
Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster
Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira
RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117
PMCID:
PMC5689002
AbstractArticlePDF–4.0M
12.
An epigenetic regulator emerges as microtubule minus-end binding and stabilizing factor in mitosis
Sylvain Meunier, Maria Shvedunova, Nhuong Van Nguyen, Leonor Avila, Isabelle Vernos, Asifa Akhtar
Nat Commun. 2015; 6: 7889. Published online 2015 Aug 5. doi: 10.1038/ncomms8889
PMCID:
PMC4918316
AbstractArticlePDF–6.1M
13.
The Adaptive Significance of Natural Genetic Variation in the DNA Damage Response of Drosophila melanogaster
Nicolas Svetec, Julie M. Cridland, Li Zhao, David J. Begun
PLoS Genet. 2016 Mar; 12(3): e1005869. Published online 2016 Mar 7. doi: 10.1371/journal.pgen.1005869
PMCID:
PMC4780809
AbstractArticlePDF–543K
14.
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders
Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937
PMCID:
PMC4528330
AbstractArticlePDF–2.2M
15.
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data
Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929
PMCID:
PMC4528329
AbstractArticlePDF–4.9M
16.
The Release 6 reference sequence of the Drosophila melanogaster genome
Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker
Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114
PMCID:
PMC4352887
AbstractArticlePDF–1022K
17.
Phylostratigraphic Bias Creates Spurious Patterns of Genome Evolution
Bryan A. Moyers, Jianzhi Zhang
Mol Biol Evol. 2015 Jan 1; 32(1): 258–267. Published online 2014 Oct 13. doi: 10.1093/molbev/msu286
Correction in:
Mol Biol Evol. 2016 Nov; 33(11): 3031.
PMCID:
PMC4271527
AbstractArticlePDF–618K
18.
Structural analysis of the KANSL1/WDR5/KANSL2 complex reveals that WDR5 is required for efficient assembly and chromatin targeting of the NSL complex
Jorge Dias, Nhuong Van Nguyen, Plamen Georgiev, Aline Gaub, Janine Brettschneider, Stephen Cusack, Jan Kadlec, Asifa Akhtar
Genes Dev. 2014 May 1; 28(9): 929–942. doi: 10.1101/gad.240200.114
PMCID:
PMC4018492
AbstractArticlePDF–1.6M
19.
A Functional Screen Reveals an Extensive Layer of Transcriptional and Splicing Control Underlying RAS/MAPK Signaling in Drosophila
Dariel Ashton-Beaucage, Christian M. Udell, Patrick Gendron, Malha Sahmi, Martin Lefrançois, Caroline Baril, Anne-Sophie Guenier, Jean Duchaine, Daniel Lamarre, Sébastien Lemieux, Marc Therrien
PLoS Biol. 2014 Mar; 12(3): e1001809. Published online 2014 Mar 18. doi: 10.1371/journal.pbio.1001809
PMCID:
PMC3958334
AbstractArticlePDF–4.0M
20.
A transcriptome-wide RNAi screen in the Drosophila ovary reveals novel factors of the germline piRNA pathway
Benjamin Czech, Jonathan B. Preall, Jon McGinn, Gregory J. Hannon
Mol Cell. Author manuscript; available in PMC 2013 Dec 6.
Published in final edited form as: Mol Cell. 2013 Jun 6; 50(5): 749–761. Published online 2013 May 9. doi: 10.1016/j.molcel.2013.04.007
PMCID:
PMC3724427
AbstractArticlePDF–2.7M

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