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Select item 110631601.

Large-language models facilitate discovery of the molecular signatures regulating sleep and activity

Di Peng, Liubin Zheng, Dan Liu, Cheng Han, Xin Wang, Yan Yang, Li Song, Miaoying Zhao, Yanfeng Wei, Jiayi Li, Xiaoxue Ye, Yuxiang Wei, Zihao Feng, Xinhe Huang, Miaomiao Chen, Yujie Gou, Yu Xue, Luoying Zhang

Nat Commun. 2024; 15: 3685. Published online 2024 May 1. doi: 10.1038/s41467-024-48005-w

PMCID:: PMC11063160

Abstract Article PDF–2.7M

Select item 110337112.

Dynamic Neuronal Instability Generates Synaptic Plasticity and Behavior: Insights from Drosophila Sleep

Masashi Tabuchi

Neurosci Res. Author manuscript; available in PMC 2024 Apr 22.

Published in final edited form as: Neurosci Res. 2024 Jan; 198: 1–7. Published online 2023 Jun 28. doi: 10.1016/j.neures.2023.06.009

PMCID:: PMC11033711

Abstract Article PDF–599K

Select item 100938523.

Wds-Mediated H3K4me3 Modification Regulates Lipid Synthesis and Transport in Drosophila

Tujing Zhao, Min Wang, Zheng Li, Hao Li, Dongqin Yuan, Xing Zhang, Mengge Guo, Wenliang Qian, Daojun Cheng

Int J Mol Sci. 2023 Apr; 24(7): 6125. Published online 2023 Mar 24. doi: 10.3390/ijms24076125

PMCID:: PMC10093852

Abstract Article PDF–7.1M

Select item 89598584.

Dieu Linh Nguyen, Anelise N. Hutson, Yutian Zhang, Skylar D. Daniels, Aidan R. Peard, Masashi Tabuchi

Front Physiol. 2022; 13: 845236. Published online 2022 Mar 9. doi: 10.3389/fphys.2022.845236

PMCID:: PMC8959858

Abstract Article PDF–3.8M

Select item 83907715.

Identification of genes contributing to a long circadian period in Drosophila melanogaster

Shailesh Kumar, Ilker Tunc, Terry R. Tansey, Mehdi Pirooznia, Susan T. Harbison

J Biol Rhythms. Author manuscript; available in PMC 2021 Aug 27.

Published in final edited form as: J Biol Rhythms. 2021 Jun; 36(3): 239–253. Published online 2020 Dec 4. doi: 10.1177/0748730420975946

PMCID:: PMC8390771

Abstract Article PDF–2.4M

Select item 80422706.

Comprehensive Identification and Alternative Splicing of Microexons in Drosophila

Ting-Lin Pang, Zhan Ding, Shao-Bo Liang, Liang Li, Bei Zhang, Yu Zhang, Yu-Jie Fan, Yong-Zhen Xu

Front Genet. 2021; 12: 642602. Published online 2021 Mar 30. doi: 10.3389/fgene.2021.642602

PMCID:: PMC8042270

Abstract Article PDF–3.6M

Select item 80393217.

Light/Clock Influences Membrane Potential Dynamics to Regulate Sleep States

Masashi Tabuchi, Kaylynn E. Coates, Oscar B. Bautista, Lauren H. Zukowski

Front Neurol. 2021; 12: 625369. Published online 2021 Mar 29. doi: 10.3389/fneur.2021.625369

PMCID:: PMC8039321

Abstract Article PDF–1.4M

Select item 79938468.

Slowpoke functions in circadian output cells to regulate rest:activity rhythms

Daniela Ruiz, Saffia T. Bajwa, Naisarg Vanani, Tanvir A. Bajwa, Daniel J. Cavanaugh

PLoS One. 2021; 16(3): e0249215. Published online 2021 Mar 25. doi: 10.1371/journal.pone.0249215

Correction in:: PLoS One. 2021; 16(5): e0251678.

PMCID:: PMC7993846

Abstract Article PDF–2.5M

Select item 78701469.

Single-cell transcriptomes of developing and adult olfactory receptor neurons in Drosophila

Colleen N McLaughlin, Maria Brbić, Qijing Xie, Tongchao Li, Felix Horns, Sai Saroja Kolluru, Justus M Kebschull, David Vacek, Anthony Xie, Jiefu Li, Robert C Jones, Jure Leskovec, Stephen R Quake, Liqun Luo, Hongjie Li

eLife. 2021; 10: e63856. Published online 2021 Feb 8. doi: 10.7554/eLife.63856

PMCID:: PMC7870146

Abstract Article PDF–11M

Select item 675805410.

Genome-Wide Expression Analysis in DrosophilaReveals Genes Controlling Circadian Behavior

M. Fernanda Ceriani, John B. Hogenesch, Marcelo Yanovsky, Satchidananda Panda, Martin Straume, Steve A. Kay

J Neurosci. 2002 Nov 1; 22(21): 9305–9319. doi: 10.1523/JNEUROSCI.22-21-09305.2002

PMCID:: PMC6758054

Abstract Article PDF–406K

Select item 623990811.

Clock-Generated Temporal Codes Determine Synaptic Plasticity to Control Sleep

Masashi Tabuchi, Joseph D. Monaco, Grace Duan, Benjamin Bell, Sha Liu, Qili Liu, Kechen Zhang, Mark N. Wu

Cell. Author manuscript; available in PMC 2019 Nov 15.

Published in final edited form as: Cell. 2018 Nov 15; 175(5): 1213–1227.e18. Published online 2018 Oct 11. doi: 10.1016/j.cell.2018.09.016

PMCID:: PMC6239908

Abstract Article PDF–3.3M

Select item 593136912.

A Whole Animal Platform to Advance A Clinical Kinase Inhibitor Into New Disease Space

Masahiro Sonoshita, Alex P. Scopton, Peter M-U. Ung, Matthew A. Murray, Lisa Silber, Andres Y. Maldonado, Alexander Real, Avner Schlessinger, Ross L. Cagan, Arvin C. Dar

Nat Chem Biol. Author manuscript; available in PMC 2018 Jul 22.

Published in final edited form as: Nat Chem Biol. 2018 Mar; 14(3): 291–298. Published online 2018 Jan 22. doi: 10.1038/nchembio.2556

PMCID:: PMC5931369

Abstract Article PDF–2.9M

Select item 570780513.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 568900214.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 549981615.

A new promoter element associated with daily time keeping in Drosophila

Brandi Sharp, Eric Paquet, Felix Naef, Akanksha Bafna, Herman Wijnen

Nucleic Acids Res. 2017 Jun 20; 45(11): 6459–6470. Published online 2017 Apr 12. doi: 10.1093/nar/gkx268

PMCID:: PMC5499816

Abstract Article PDF–3.0M

Select item 493787316.

The Genetic Basis for Variation in Sensitivity to Lead Toxicity in Drosophila melanogaster

Shanshan Zhou, Tatiana V. Morozova, Yasmeen N. Hussain, Sarah E. Luoma, Lenovia McCoy, Akihiko Yamamoto, Trudy F.C. Mackay, Robert R.H. Anholt

Environ Health Perspect. 2016 Jul; 124(7): 1062–1070. Published online 2016 Feb 9. doi: 10.1289/ehp.1510513

PMCID:: PMC4937873

Abstract Article PDF–1.3M

Select item 492804717.

Cold acclimation wholly reorganizes the Drosophila melanogaster transcriptome and metabolome

Heath A. MacMillan, Jose M. Knee, Alice B. Dennis, Hiroko Udaka, Katie E. Marshall, Thomas J. S. Merritt, Brent J. Sinclair

Sci Rep. 2016; 6: 28999. Published online 2016 Jun 30. doi: 10.1038/srep28999

PMCID:: PMC4928047

Abstract Article PDF–3.1M

Select item 482931718.

Genome-wide identification and characterization of tissue-specific RNA editing events in D. melanogaster and their potential role in regulating alternative splicing

Alborz Mazloomian, Irmtraud M Meyer

RNA Biol. 2015 Dec; 12(12): 1391–1401. Published online 2015 Oct 29. doi: 10.1080/15476286.2015.1107703

PMCID:: PMC4829317

Abstract Article PDF–609K

Select item 456802519.

Genes conserved in bilaterians but jointly lost with Myc during nematode evolution are enriched in cell proliferation and cell migration functions

Albert J. Erives

Dev Genes Evol. 2015; 225(5): 259–273. Published online 2015 Jul 15. doi: 10.1007/s00427-015-0508-1

PMCID:: PMC4568025

Abstract Article PDF–2.8M

Select item 452833020.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937