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Items: 1 to 20 of 32

1.
Genomic context-dependent histone H3K36 methylation by three Drosophila methyltransferases and implications for dedicated chromatin readers
Muhunden Jayakrishnan, Magdalena Havlová, Václav Veverka, Catherine Regnard, Peter B Becker
Nucleic Acids Res. 2024 Jul 22; 52(13): 7627–7649. Published online 2024 May 30. doi: 10.1093/nar/gkae449
PMCID:
PMC11260483
AbstractArticlePDF–2.6M
2.
Comparative interactome analysis of α-arrestin families in human and Drosophila
Kyung-Tae Lee, Inez KA Pranoto, Soon-Young Kim, Hee-Joo Choi, Ngoc Bao To, Hansong Chae, Jeong-Yeon Lee, Jung-Eun Kim, Young V Kwon, Jin-Wu Nam
eLife. 2024; 12: RP88328. Published online 2024 Jan 25. doi: 10.7554/eLife.88328
PMCID:
PMC10945707
AbstractArticlePDF–2.8M
3.
The human leukemic oncogene MLL-AF4 promotes hyperplastic growth of hematopoietic tissues in Drosophila larvae
Julie A. Johannessen, Miriam Formica, Aina Louise C. Haukeland, Nora Rojahn Bråthen, Amani Al Outa, Miriam Aarsund, Marc Therrien, Jorrit M. Enserink, Helene Knævelsrud
iScience. 2023 Oct 20; 26(10): 107726. Published online 2023 Aug 25. doi: 10.1016/j.isci.2023.107726
PMCID:
PMC10504488
AbstractArticlePDF–3.9M
4.
Tumor–host interactions through the lens of Drosophila
David Bilder, Katy Ong, Tsai-Ching Hsi, Kavya Adiga, Jung Kim
Nat Rev Cancer. Author manuscript; available in PMC 2022 May 1.
Published in final edited form as: Nat Rev Cancer. 2021 Nov; 21(11): 687–700. Published online 2021 Aug 13. doi: 10.1038/s41568-021-00387-5
PMCID:
PMC8669834
AbstractArticlePDF–385K
5.
Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes
Ana López-Varea, Patricia Vega-Cuesta, Ana Ruiz-Gómez, Cristina M Ostalé, Cristina Molnar, Covadonga F Hevia, Mercedes Martín, Maria F Organista, Jesus de Celis, Joaquín Culí, Nuria Esteban, Jose F de Celis
G3 (Bethesda) 2021 Dec; 11(12): jkab349. Published online 2021 Oct 2. doi: 10.1093/g3journal/jkab349
PMCID:
PMC8664486
AbstractArticlePDF–3.1M
6.
Drosophila P75 safeguards oogenesis by preventing H3K9me2 spreading
Kun Dou, Yanchao Liu, Yingpei Zhang, Chenhui Wang, Ying Huang, ZZ Zhao Zhang
J Genet Genomics. Author manuscript; available in PMC 2021 Apr 20.
Published in final edited form as: J Genet Genomics. 2020 Apr 20; 47(4): 187–199. Published online 2020 Mar 19. doi: 10.1016/j.jgg.2020.02.008
PMCID:
PMC7416749
AbstractArticlePDF–2.8M
7.
JASPer controls interphase histone H3S10 phosphorylation by chromosomal kinase JIL-1 in Drosophila
Christian Albig, Chao Wang, Geoffrey P. Dann, Felix Wojcik, Tamás Schauer, Silke Krause, Sylvain Maenner, Weili Cai, Yeran Li, Jack Girton, Tom W. Muir, Jørgen Johansen, Kristen M. Johansen, Peter B. Becker, Catherine Regnard
Nat Commun. 2019; 10: 5343. Published online 2019 Nov 25. doi: 10.1038/s41467-019-13174-6
PMCID:
PMC6877644
AbstractArticlePDF–3.6M
8.
Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species
Piero Sanfilippo, Jiayu Wen, Eric C. Lai
Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0
PMCID:
PMC5707805
AbstractArticlePDF–3.2M
9.
Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster
Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira
RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117
PMCID:
PMC5689002
AbstractArticlePDF–4.0M
10.
Comparison of independent screens on differentially vulnerable motor neurons reveals alpha-synuclein as a common modifier in motor neuron diseases
Rachel A. Kline, Kevin A. Kaifer, Erkan Y. Osman, Francesco Carella, Ariana Tiberi, Jolill Ross, Giuseppa Pennetta, Christian L. Lorson, Lyndsay M. Murray
PLoS Genet. 2017 Mar; 13(3): e1006680. Published online 2017 Mar 31. doi: 10.1371/journal.pgen.1006680
PMCID:
PMC5391970
AbstractArticlePDF–1.5M
11.
Proteome-wide association studies identify biochemical modules associated with a wing-size phenotype in Drosophila melanogaster
Hirokazu Okada, H. Alexander Ebhardt, Sibylle Chantal Vonesch, Ruedi Aebersold, Ernst Hafen
Nat Commun. 2016; 7: 12649. Published online 2016 Sep 1. doi: 10.1038/ncomms12649
PMCID:
PMC5025782
AbstractArticlePDF–2.2M
12.
Hedgehog Signaling Strength Is Orchestrated by the mir-310 Cluster of MicroRNAs in Response to Diet
Ibrahim Ömer Çiçek, Samir Karaca, Marko Brankatschk, Suzanne Eaton, Henning Urlaub, Halyna R. Shcherbata
Genetics. 2016 Mar; 202(3): 1167–1183. Published online 2016 Jan 22. doi: 10.1534/genetics.115.185371
PMCID:
PMC4788116
AbstractArticlePDF–4.7M
13.
The Central Region of the Drosophila Co-repressor Groucho as a Regulatory Hub
Pak N. Kwong, Michael Chambers, Ajay A. Vashisht, Wiam Turki-Judeh, Tak Yu Yau, James A. Wohlschlegel, Albert J. Courey
J Biol Chem. 2015 Dec 11; 290(50): 30119–30130. Published online 2015 Oct 19. doi: 10.1074/jbc.M115.681171
Correction in:
J Biol Chem. 2016 Mar 25; 291(13): 6784.
PMCID:
PMC4705979
AbstractArticlePDF–1.3M
14.
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders
Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937
PMCID:
PMC4528330
AbstractArticlePDF–2.2M
15.
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data
Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929
PMCID:
PMC4528329
AbstractArticlePDF–4.9M
16.
Genetic Architecture of Abdominal Pigmentation in Drosophila melanogaster
Lauren M. Dembeck, Wen Huang, Michael M. Magwire, Faye Lawrence, Richard F. Lyman, Trudy F. C. Mackay
PLoS Genet. 2015 May; 11(5): e1005163. Published online 2015 May 1. doi: 10.1371/journal.pgen.1005163
PMCID:
PMC4416719
AbstractArticlePDF–28M
17.
The Release 6 reference sequence of the Drosophila melanogaster genome
Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker
Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114
PMCID:
PMC4352887
AbstractArticlePDF–1022K
18.
A transcriptome-wide RNAi screen in the Drosophila ovary reveals novel factors of the germline piRNA pathway
Benjamin Czech, Jonathan B. Preall, Jon McGinn, Gregory J. Hannon
Mol Cell. Author manuscript; available in PMC 2013 Dec 6.
Published in final edited form as: Mol Cell. 2013 Jun 6; 50(5): 749–761. Published online 2013 May 9. doi: 10.1016/j.molcel.2013.04.007
PMCID:
PMC3724427
AbstractArticlePDF–2.7M
19.
ChIP-mass spectrometry captures protein interactions and modified histones associated with dosage compensation in Drosophila
C. I. Wang, A. A. Alekseyenko, G. LeRoy, A. E. H. Elia, A. A. Gorchakov, L-M. P. Britton, S. J. Elledge, P. V. Kharchenko, B. A. Garcia, M. I. Kuroda
Nat Struct Mol Biol. Author manuscript; available in PMC 2013 Aug 1.
Published in final edited form as: Nat Struct Mol Biol. 2013 Feb; 20(2): 202–209. Published online 2013 Jan 6. doi: 10.1038/nsmb.2477
PMCID:
PMC3674866
AbstractArticlePDF–1.9M
20.
High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression
Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras
Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112
PMCID:
PMC3530677
AbstractArticlePDF–1.5M

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