PMC Links for GEO Profiles (Select 24722046) - PMC

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Items: 17

Select item 92925191.

MSI4/FVE is required for accumulation of 24‐nt siRNAs and DNA methylation at a subset of target regions of RNA‐directed DNA methylation

Pei Huang, Huan Huang, Xueqiang Lin, Pan Liu, Lun Zhao, Wen‐Feng Nie, Jian‐Kang Zhu, Zhaobo Lang

Plant J. 2021 Oct; 108(2): 347–357. Published online 2021 Aug 21. doi: 10.1111/tpj.15441

PMCID:: PMC9292519

Abstract Article PDF–615K

Select item 72970452.

A pan-plant protein complex map reveals deep conservation and novel assemblies

Claire D. McWhite, Ophelia Papoulas, Kevin Drew, Rachael M. Cox, Viviana June, Oliver Xiaoou Dong, Taejoon Kwon, Cuihong Wan, Mari L. Salmi, Stanley J. Roux, Jr., Karen S. Browning, Z. Jeffrey Chen, Pamela C. Ronald, Edward M. Marcotte

Cell. Author manuscript; available in PMC 2021 Apr 16.

Published in final edited form as: Cell. 2020 Apr 16; 181(2): 460–474.e14. Published online 2020 Mar 18. doi: 10.1016/j.cell.2020.02.049

PMCID:: PMC7297045

Abstract Article PDF–4.0M

Select item 56720033.

Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling

Zachary McBride, Donglai Chen, Christy Reick, Jun Xie, Daniel B. Szymanski

Mol Cell Proteomics. 2017 Nov; 16(11): 1972–1989. Published online 2017 Sep 8. doi: 10.1074/mcp.RA117.000276

PMCID:: PMC5672003

Abstract Article PDF–3.5M

Select item 55642164.

CrY2H-seq: a massively-multiplexed assay for deep coverage interactome mapping

Shelly A. Wanamaker, Renee M. Garza, Andrew MacWilliams, Joseph R. Nery, Anna Bartlett, Rosa Castanon, Adeline Goubil, Joseph Feeney, Ronan O’Malley, Shao-shan Carol Huang, Zhuzhu Z. Zhang, Mary Galli, Joseph R. Ecker

Nat Methods. Author manuscript; available in PMC 2017 Dec 26.

Published in final edited form as: Nat Methods. 2017 Aug; 14(8): 819–825. Published online 2017 Jun 26. doi: 10.1038/nmeth.4343

Correction in:: Nat Methods. 2023 Jan 23

PMCID:: PMC5564216

Abstract Article PDF–1.3M

Select item 50358985.

Chloroplast retrograde signal regulates flowering

Peiqiang Feng, Hailong Guo, Wei Chi, Xin Chai, Xuwu Sun, Xiumei Xu, Jinfang Ma, Jean-David Rochaix, Dario Leister, Haiyang Wang, Congming Lu, Lixin Zhang

Proc Natl Acad Sci U S A. 2016 Sep 20; 113(38): 10708–10713. Published online 2016 Sep 6. doi: 10.1073/pnas.1521599113

PMCID:: PMC5035898

Abstract Article PDF–1.0M

Select item 44280656.

Negative regulatory roles of DE-ETIOLATED1 in flowering time in Arabidopsis

Min-Young Kang, Soo-Cheul Yoo, Hye-Young Kwon, Byoung-Doo Lee, Jung-Nam Cho, Yoo-Sun Noh, Nam-Chon Paek

Sci Rep. 2015; 5: 9728. Published online 2015 May 12. doi: 10.1038/srep09728

PMCID:: PMC4428065

Abstract Article PDF–2.3M

Select item 42475647.

A Proteomic Strategy for Global Analysis of Plant Protein Complexes

Uma K. Aryal, Yi Xiong, Zachary McBride, Daisuke Kihara, Jun Xie, Mark C. Hall, Daniel B. Szymanski

Plant Cell. 2014 Oct; 26(10): 3867–3882. Published online 2014 Oct 7. doi: 10.1105/tpc.114.127563

PMCID:: PMC4247564

Abstract Article PDF–1.4M

Select item 41237508.

Molecular Mechanism of Action of Plant DRM De Novo DNA Methyltransferases

Xuehua Zhong, Jiamu Du, Christopher J. Hale, Javier Gallego-Bartolome, Suhua Feng, Ajay A. Vashisht, Joanne Chory, James A. Wohlschlegel, Dinshaw J. Patel, Steven E. Jacobsen

Cell. Author manuscript; available in PMC 2015 May 22.

Published in final edited form as: Cell. 2014 May 22; 157(5): 1050–1060. doi: 10.1016/j.cell.2014.03.056

PMCID:: PMC4123750

Abstract Article PDF–1.7M

Select item 38876299.

FVE, an Arabidopsis Homologue of the Retinoblastoma-Associated Protein That Regulates Flowering Time and Cold Response, Binds to Chromatin as a Large Multiprotein Complex

Jin Jeon, Jungmook Kim

Mol Cells. 2011 Sep 30; 32(3): 227–234. doi: 10.1007/s10059-011-1022-6

PMCID:: PMC3887629

Abstract Article PDF–762K

Select item 387572410.

The Cold Signaling Attenuator HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENE1 Activates FLOWERING LOCUS C Transcription via Chromatin Remodeling under Short-Term Cold Stress in Arabidopsis

Jae-Hoon Jung, Ju-Hyung Park, Sangmin Lee, Taiko Kim To, Jong-Myong Kim, Motoaki Seki, Chung-Mo Park

Plant Cell. 2013 Nov; 25(11): 4378–4390. Published online 2013 Nov 12. doi: 10.1105/tpc.113.118364

PMCID:: PMC3875724

Abstract Article PDF–1.1M

Select item 327178311.

Participation of Chromatin-Remodeling Proteins in the Repair of Ultraviolet-B-Damaged DNA

Mabel Campi, Lucio D’Andrea, Julia Emiliani, Paula Casati

Plant Physiol. 2012 Feb; 158(2): 981–995. Published online 2011 Dec 14. doi: 10.1104/pp.111.191452

PMCID:: PMC3271783

Abstract Article PDF–772K

Select item 325208512.

The TOPLESS Interactome: A Framework for Gene Repression in Arabidopsis

Barry Causier, Mary Ashworth, Wenjia Guo, Brendan Davies

Plant Physiol. 2012 Jan; 158(1): 423–438. Published online 2011 Nov 7. doi: 10.1104/pp.111.186999

PMCID:: PMC3252085

Abstract Article PDF–1.4M

Select item 321315813.

Arabidopsis Homologs of Retinoblastoma-Associated Protein 46/48 Associate with a Histone Deacetylase to Act Redundantly in Chromatin Silencing

Xiaofeng Gu, Danhua Jiang, Wannian Yang, Yannick Jacob, Scott D. Michaels, Yuehui He

PLoS Genet. 2011 Nov; 7(11): e1002366. Published online 2011 Nov 10. doi: 10.1371/journal.pgen.1002366

PMCID:: PMC3213158

Abstract Article PDF–1.0M

Select item 304439214.

MSI4/FVE interacts with CUL4–DDB1 and a PRC2-like complex to control epigenetic regulation of flowering time in Arabidopsis

Maghsoud Pazhouhandeh, Jean Molinier, Alexandre Berr, Pascal Genschik

Proc Natl Acad Sci U S A. 2011 Feb 22; 108(8): 3430–3435. Published online 2011 Jan 31. doi: 10.1073/pnas.1018242108

PMCID:: PMC3044392

Abstract Article PDF–995K

Select item 248337515.

Arabidopsis DDB1-CUL4 ASSOCIATED FACTOR1 Forms a Nuclear E3 Ubiquitin Ligase with DDB1 and CUL4 That Is Involved in Multiple Plant Developmental Processes

Yu Zhang, Suhua Feng, Fangfang Chen, Haodong Chen, Jia Wang, Chad McCall, Yue Xiong, Xing Wang Deng

Plant Cell. 2008 Jun; 20(6): 1437–1455. doi: 10.1105/tpc.108.058891

PMCID:: PMC2483375

Abstract Article PDF–2.2M

Select item 225492916.

Characterization of Arabidopsis and Rice DWD Proteins and Their Roles as Substrate Receptors for CUL4-RING E3 Ubiquitin Ligases

Jae-Hoon Lee, William Terzaghi, Giuliana Gusmaroli, Jean-Benoit F. Charron, Hye-Jin Yoon, Haodong Chen, Yizhou Joseph He, Yue Xiong, Xing Wang Deng

Plant Cell. 2008 Jan; 20(1): 152–167. doi: 10.1105/tpc.107.055418

PMCID:: PMC2254929

Abstract Article PDF–1.8M

Select item 53917017.

Proteomic Analysis of the Arabidopsis Nucleolus Suggests Novel Nucleolar Functions

Alison F. Pendle, Gillian P. Clark, Reinier Boon, Dominika Lewandowska, Yun Wah Lam, Jens Andersen, Matthias Mann, Angus I. Lamond, John W. S. Brown, Peter J. Shaw

Mol Biol Cell. 2005 Jan; 16(1): 260–269. doi: 10.1091/mbc.E04-09-0791