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Select item 111121631.

CHD4 and SMYD1 repress common transcriptional programs in the developing heart

Wei Shi, Lauren K. Wasson, Kerry M. Dorr, Zachary L. Robbe, Caralynn M. Wilczewski, Austin J. Hepperla, Ian J. Davis, Christine E. Seidman, Jonathan G. Seidman, Frank L. Conlon

Development. 2024 Apr 15; 151(8): dev202505. Published online 2024 May 3. doi: 10.1242/dev.202505

PMCID:: PMC11112163

Abstract Article

Select item 102030082.

SMYD1a protects the heart from ischemic injury by regulating OPA1-mediated cristae remodeling and supercomplex formation

Marta W. Szulik, Steven Valdez, Maureen Walsh, Kathryn Davis, Ryan Bia, Emilee Horiuchi, Sean O’Very, Anil K. Laxman, Linda Sandaklie-Nicolova, David R. Eberhardt, Jessica R. Durrant, Hanin Sheikh, Samuel Hickenlooper, Magnus Creed, Cameron Brady, Mickey Miller, Li Wang, June Garcia-Llana, Christopher Tracy, Stavros G. Drakos, Katsuhiko Funai, Dipayan Chaudhuri, Sihem Boudina, Sarah Franklin

Basic Res Cardiol. 2023; 118(1): 20. Published online 2023 May 22. doi: 10.1007/s00395-023-00991-6

PMCID:: PMC10203008

Abstract Article PDF–7.3M

Select item 101914413.

USP7 represses lineage differentiation genes in mouse embryonic stem cells by both catalytic and noncatalytic activities

Chao Liu, Lingang Sun, Yijun Tan, Qi Wang, Tao Luo, Chenlu Li, Nan Yao, Yuting Xie, Xiao Yi, Yi Zhu, Tiannan Guo, Junfeng Ji

Sci Adv. 2023 May; 9(20): eade3888. Published online 2023 May 17. doi: 10.1126/sciadv.ade3888

PMCID:: PMC10191441

Abstract Article PDF–2.4M

Select item 97188234.

DOT1L regulates chamber-specific transcriptional networks during cardiogenesis and mediates postnatal cell cycle withdrawal

Paola Cattaneo, Michael G. B. Hayes, Nina Baumgarten, Dennis Hecker, Sofia Peruzzo, Galip S. Aslan, Paolo Kunderfranco, Veronica Larcher, Lunfeng Zhang, Riccardo Contu, Gregory Fonseca, Simone Spinozzi, Ju Chen, Gianluigi Condorelli, Stefanie Dimmeler, Marcel H. Schulz, Sven Heinz, Nuno Guimarães-Camboa, Sylvia M. Evans

Nat Commun. 2022; 13: 7444. Published online 2022 Dec 2. doi: 10.1038/s41467-022-35070-2

PMCID:: PMC9718823

Abstract Article PDF–9.4M

Select item 80471375.

Smyd1 Orchestrates Early Heart Development Through Positive and Negative Gene Regulation

Zhen Wang, Robert J. Schwartz, Jing Liu, Fei Sun, Qi Li, Yanlin Ma

Front Cell Dev Biol. 2021; 9: 654682. Published online 2021 Apr 1. doi: 10.3389/fcell.2021.654682

PMCID:: PMC8047137

Abstract Article PDF–2.1M

Select item 79387706.

BraInMap elucidates the macromolecular connectivity landscape of mammalian brain

Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili

Cell Syst. Author manuscript; available in PMC 2021 Apr 22.

Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003

Correction in:: Cell Syst. 2020 Aug 26; 11(2): 208.

PMCID:: PMC7938770

Abstract Article PDF–2.0M

Select item 73107237.

Perm1 regulates cardiac energetics as a downstream target of the histone methyltransferase Smyd1

Shin-ichi Oka, Amira D. Sabry, Amanda K. Horiuchi, Keiko M. Cawley, Sean A. O’Very, Maria A. Zaitsev, Thirupura S. Shankar, Jaemin Byun, Risa Mukai, Xiaoyong Xu, Natalia S. Torres, Anil Kumar, Masayuki Yazawa, Jing Ling, Iosif Taleb, Yukio Saijoh, Stavros G. Drakos, Junichi Sadoshima, Junco S. Warren

PLoS One. 2020; 15(6): e0234913. Published online 2020 Jun 23. doi: 10.1371/journal.pone.0234913

PMCID:: PMC7310723

Abstract Article PDF–2.7M

Select item 60998788.

Histone methyltransferase Smyd1 regulates mitochondrial energetics in the heart

Junco S. Warren, Christopher M. Tracy, Mickey R. Miller, Aman Makaju, Marta W. Szulik, Shin-ichi Oka, Tatiana N. Yuzyuk, James E. Cox, Anil Kumar, Bucky K. Lozier, Li Wang, June García Llana, Amira D. Sabry, Keiko M. Cawley, Dane W. Barton, Yong Hwan Han, Sihem Boudina, Oliver Fiehn, Haley O. Tucker, Alexey V. Zaitsev, Sarah Franklin

Proc Natl Acad Sci U S A. 2018 Aug 14; 115(33): E7871–E7880. Published online 2018 Jul 30. doi: 10.1073/pnas.1800680115

PMCID:: PMC6099878

Abstract Article PDF–1.8M

Select item 59876069.

Gene expression profiling in the developing secondary palate in the absence of Tbx1 function

Maria Zoupa, Guilherme Machado Xavier, Stephanie Bryan, Ioannis Theologidis, Matthew Arno, Martyn T. Cobourne

BMC Genomics. 2018; 19: 429. Published online 2018 Jun 4. doi: 10.1186/s12864-018-4782-y

PMCID:: PMC5987606

Abstract Article PDF–2.6M

Select item 513049010.

The chromatin-binding protein Smyd1 restricts adult mammalian heart growth

Sarah Franklin, Todd Kimball, Tara L. Rasmussen, Manuel Rosa-Garrido, Haodong Chen, Tam Tran, Mickey R. Miller, Ricardo Gray, Shanxi Jiang, Shuxun Ren, Yibin Wang, Haley O. Tucker, Thomas M. Vondriska

Am J Physiol Heart Circ Physiol. 2016 Nov 1; 311(5): H1234–H1247. Published online 2016 Sep 23. doi: 10.1152/ajpheart.00235.2016

PMCID:: PMC5130490

Abstract Article

Select item 499035611.

The cardiac-restricted protein ADP-ribosylhydrolase-like 1 is essential for heart chamber outgrowth and acts on muscle actin filament assembly

Stuart J. Smith, Norma Towers, José W. Saldanha, Catherine A. Shang, S. Radma Mahmood, William R. Taylor, Timothy J. Mohun

Dev Biol. 2016 Aug 15; 416(2): 373–388. doi: 10.1016/j.ydbio.2016.05.006

PMCID:: PMC4990356

Abstract Article

Select item 483332812.

Mouse myofibers lacking the SMYD1 methyltransferase are susceptible to atrophy, internalization of nuclei and myofibrillar disarray

M. David Stewart, Suhujey Lopez, Harika Nagandla, Benjamin Soibam, Ashley Benham, Jasmine Nguyen, Nicolas Valenzuela, Harry J. Wu, Alan R. Burns, Tara L. Rasmussen, Haley O. Tucker, Robert J. Schwartz

Dis Model Mech. 2016 Mar 1; 9(3): 347–359. doi: 10.1242/dmm.022491

PMCID:: PMC4833328

Abstract Article

Select item 472150913.

Master redox regulator Trx1 upregulates SMYD1 & modulates lysine methylation

Tong Liu, Changgong Wu, Mohit Raja Jain, Narayani Nagarajan, Lin Yan, Huacheng Dai, Chuanlong Cui, Ahmet Baykal, Stacey Pan, Tetsuro Ago, Junichi Sadoshima, Hong Li

Biochim Biophys Acta. Author manuscript; available in PMC 2016 Mar 1.

Published in final edited form as: Biochim Biophys Acta. 2015 Dec; 1854(12): 1816–1822. Published online 2015 Sep 26. doi: 10.1016/j.bbapap.2015.09.006

PMCID:: PMC4721509

Abstract Article PDF–370K

Select item 437259814.

Smyd1 Facilitates Heart Development by Antagonizing Oxidative and ER Stress Responses

Tara L. Rasmussen, Yanlin Ma, Chong Yon Park, June Harriss, Stephanie A. Pierce, Joseph D. Dekker, Nicolas Valenzuela, Deepak Srivastava, Robert J. Schwartz, M. David Stewart, Haley O. Tucker

PLoS One. 2015; 10(3): e0121765. Published online 2015 Mar 24. doi: 10.1371/journal.pone.0121765

PMCID:: PMC4372598

Abstract Article PDF–12M

Select item 416216815.

Role of the ANKMY2-FKBP38 Axis in Regulation of the Sonic Hedgehog (Shh) Signaling Pathway

Shotaro Saita, Michiko Shirane, Tohru Ishitani, Nobuyuki Shimizu, Keiichi I. Nakayama

J Biol Chem. 2014 Sep 12; 289(37): 25639–25654. Published online 2014 Jul 30. doi: 10.1074/jbc.M114.558635

PMCID:: PMC4162168

Abstract Article PDF–5.4M

Select item 381464216.

Oncogenic RAS directs silencing of tumor suppressor genes through ordered recruitment of transcriptional repressors

Narendra Wajapeyee, Sunil K. Malonia, Rajendra K. Palakurthy, Michael R. Green

Genes Dev. 2013 Oct 15; 27(20): 2221–2226. doi: 10.1101/gad.227413.113

PMCID:: PMC3814642

Abstract Article PDF–1.0M

Select item 379774817.

The AERO System: A 3D-Like Approach for Recording Gene Expression Patterns in the Whole Mouse Embryo

Hirohito Shimizu, Atsushi Kubo, Kenta Uchibe, Megumi Hashimoto, Shigetoshi Yokoyama, Shuji Takada, Kazuhiko Mitsuoka, Hiroshi Asahara

PLoS One. 2013; 8(10): e75754. Published online 2013 Oct 16. doi: 10.1371/journal.pone.0075754

PMCID:: PMC3797748

Abstract Article PDF–564K

Select item 376423118.

Age of Onset of RNA Toxicity Influences Phenotypic Severity: Evidence from an Inducible Mouse Model of Myotonic Dystrophy (DM1)

Jordan T. Gladman, Mahua Mandal, Varadamurthy Srinivasan, Mani S. Mahadevan

PLoS One. 2013; 8(9): e72907. Published online 2013 Sep 5. doi: 10.1371/journal.pone.0072907

PMCID:: PMC3764231

Abstract Article PDF–1.7M

Select item 317805919.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 311015120.

A Systems Approach Reveals that the Myogenesis Genome Network Is Regulated by the Transcriptional Repressor RP58

Shigetoshi Yokoyama, Yoshiaki Ito, Hiroe Ueno-Kudoh, Hirohito Shimizu, Kenta Uchibe, Sonia Albini, Kazuhiko Mitsuoka, Shigeru Miyaki, Minako Kiso, Akane Nagai, Tomohiro Hikata, Tadahiro Osada, Noritsugu Fukuda, Satoshi Yamashita, Daisuke Harada, Valeria Mezzano, Masataka Kasai, Pier Lorenzo Puri, Yoshihide Hayashizaki, Haruo Okado, Megumi Hashimoto, Hiroshi Asahara

Dev Cell. Author manuscript; available in PMC 2011 Jun 7.

Published in final edited form as: Dev Cell. 2009 Dec; 17(6): 836–848. doi: 10.1016/j.devcel.2009.10.011

PMCID:: PMC3110151

Abstract Article PDF–2.0M

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