PMC Links for GEO Profiles (Select 22445597) - PMC

Loni Klaus, Bernardo P de Almeida, Anna Vlasova, Filip Nemčko, Alexander Schleiffer, Katharina Bergauer, Lorena Hofbauer, Martina Rath, Alexander Stark

EMBO J. 2023 Feb; 42(3): e112100. Published online 2022 Dec 22. doi: 10.15252/embj.2022112100

PMCID:: PMC9890238

Abstract Article PDF–1.2M

Select item 97134314.

Transcriptome analysis of FOXO-dependent hypoxia gene expression identifies Hipk as a regulator of low oxygen tolerance in Drosophila

Kate Ding, Elizabeth C Barretto, Michael Johnston, Byoungchun Lee, Marco Gallo, Savraj S Grewal

G3 (Bethesda) 2022 Dec; 12(12): jkac263. Published online 2022 Oct 6. doi: 10.1093/g3journal/jkac263

PMCID:: PMC9713431

Abstract Article PDF–1.0M

Select item 96041075.

Genome ARTIST_v2—An Autonomous Bioinformatics Tool for Annotation of Natural Transposons in Sequenced Genomes

Alexandru Al. Ecovoiu, Alexandru Marian Bologa, David Ioan Mihail Chifiriuc, Andrei Mihai Ciuca, Nicoleta Denisa Constantin, Iulian Constantin Ghionoiu, Iulian Cristian Ghita, Attila Cristian Ratiu

Int J Mol Sci. 2022 Oct; 23(20): 12686. Published online 2022 Oct 21. doi: 10.3390/ijms232012686

PMCID:: PMC9604107

Abstract Article PDF–2.7M

Select item 95088386.

Dichotomous cis-regulatory motifs mediate the maturation of the neuromuscular junction by retrograde BMP signaling

Robin Vuilleumier, Mo Miao, Sonia Medina-Giro, Clara-Maria Ell, Stephane Flibotte, Tianshun Lian, Grant Kauwe, Annie Collins, Sophia Ly, George Pyrowolakis, A Pejmun Haghighi, Douglas W Allan

Nucleic Acids Res. 2022 Sep 23; 50(17): 9748–9764. Published online 2022 Aug 27. doi: 10.1093/nar/gkac730

PMCID:: PMC9508838

Abstract Article PDF–4.1M

Select item 91346057.

Harnessing changes in open chromatin determined by ATAC-seq to generate insulin-responsive reporter constructs

Collin B. Merrill, Austin B. Montgomery, Miguel A. Pabon, Andrey A. Shabalin, Aylin R. Rodan, Adrian Rothenfluh

BMC Genomics. 2022; 23: 399. Published online 2022 May 25. doi: 10.1186/s12864-022-08637-y

PMCID:: PMC9134605

Abstract Article PDF–3.3M

Select item 86644868.

Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes

Ana López-Varea, Patricia Vega-Cuesta, Ana Ruiz-Gómez, Cristina M Ostalé, Cristina Molnar, Covadonga F Hevia, Mercedes Martín, Maria F Organista, Jesus de Celis, Joaquín Culí, Nuria Esteban, Jose F de Celis

G3 (Bethesda) 2021 Dec; 11(12): jkab349. Published online 2021 Oct 2. doi: 10.1093/g3journal/jkab349

PMCID:: PMC8664486

Abstract Article PDF–3.1M

Select item 83753379.

The brinker repressor system regulates injury-induced nociceptive sensitization in Drosophila melanogaster

Aidan McParland, Julie Moulton, Courtney Brann, Christine Hale, Yvonne Otis, Geoffrey Ganter

Mol Pain. 2021; 17: 17448069211037401. Published online 2021 Aug 16. doi: 10.1177/17448069211037401

PMCID:: PMC8375337

Abstract Article PDF–899K

Select item 836547210.

Role of the Forkhead Transcription Factors Fd4 and Fd5 During Drosophila Leg Development

Mireya Ruiz-Losada, Cristian Pérez-Reyes, Carlos Estella

Front Cell Dev Biol. 2021; 9: 723927. Published online 2021 Aug 2. doi: 10.3389/fcell.2021.723927

PMCID:: PMC8365472

Abstract Article PDF–3.8M

Select item 804569811.

Natural genetic variation in Drosophila melanogaster reveals genes associated with Coxiella burnetii infection

Rosa M Guzman, Zachary P Howard, Ziying Liu, Ryan D Oliveira, Alisha T Massa, Anders Omsland, Stephen N White, Alan G Goodman

Genetics. 2021 Mar; 217(3): iyab005. Published online 2021 Jan 23. doi: 10.1093/genetics/iyab005

PMCID:: PMC8045698

Abstract Article PDF–695K

Select item 785538512.

Molecular and Biological Functions of TRIM-NHL RNA-Binding Proteins

Robert P. Connacher, Aaron C. Goldstrohm

Wiley Interdiscip Rev RNA. Author manuscript; available in PMC 2022 Mar 1.

Published in final edited form as: Wiley Interdiscip Rev RNA. 2021 Mar; 12(2): e1620. Published online 2020 Aug 1. doi: 10.1002/wrna.1620

PMCID:: PMC7855385

Abstract Article PDF–2.1M

Select item 785159613.

Genomics of Recombination Rate Variation in Temperature-Evolved Drosophila melanogaster Populations

Ari Winbush, Nadia D Singh

Genome Biol Evol. 2021 Jan; 13(1): evaa252. Published online 2020 Nov 28. doi: 10.1093/gbe/evaa252

PMCID:: PMC7851596

Abstract Article PDF–778K

Select item 771009514.

Identification of novel regulators of dendrite arborization using cell type-specific RNA metabolic labeling

Mohamed Y. Aboukilila, Josephine D. Sami, Jingtian Wang, Whitney England, Robert C. Spitale, Michael D. Cleary

PLoS One. 2020; 15(12): e0240386. Published online 2020 Dec 2. doi: 10.1371/journal.pone.0240386

PMCID:: PMC7710095

Abstract Article PDF–1.6M

Select item 766926615.

A low affinity cis-regulatory BMP response element restricts target gene activation to subsets of Drosophila neurons

Anthony JE Berndt, Katerina M Othonos, Tianshun Lian, Stephane Flibotte, Mo Miao, Shamsuddin A Bhuiyan, Raymond Y Cho, Justin S Fong, Seo Am Hur, Paul Pavlidis, Douglas W Allan

eLife. 2020; 9: e59650. Published online 2020 Oct 30. doi: 10.7554/eLife.59650

PMCID:: PMC7669266

Abstract Article PDF–6.8M

Select item 758814216.

NF-κB disinhibition contributes to dendrite defects in fly models of neurodegenerative diseases

Myeong Hoon Han, Min Jee Kwon, Byung Su Ko, Do Young Hyeon, Davin Lee, Hyung-Jun Kim, Daehee Hwang, Sung Bae Lee

J Cell Biol. 2020 Dec 7; 219(12): e202004107. Published online 2020 Oct 22. doi: 10.1083/jcb.202004107

PMCID:: PMC7588142

Abstract Article PDF–5.5M

Select item 755019217.

Topology-driven protein-protein interaction network analysis detects genetic sub-networks regulating reproductive capacity

Tarun Kumar, Leo Blondel, Cassandra G Extavour

eLife. 2020; 9: e54082. Published online 2020 Sep 9. doi: 10.7554/eLife.54082

PMCID:: PMC7550192

Abstract Article PDF–2.8M

Select item 733707118.

Amyotrophic Lateral Sclerosis Modifiers in Drosophila Reveal the Phospholipase D Pathway as a Potential Therapeutic Target

Mark W. Kankel, Anindya Sen, Lei Lu, Marina Theodorou, Douglas N. Dimlich, Alexander McCampbell, Christopher E. Henderson, Neil A. Shneider, Spyros Artavanis-Tsakonas

Genetics. 2020 Jul; 215(3): 747–766. Published online 2020 Apr 28. doi: 10.1534/genetics.119.302985

PMCID:: PMC7337071

Abstract Article PDF–2.6M

Select item 725232819.

Genetic mapping of shn^E.3.2 in Drosophila melanogaster

Kayla Bieser, Jamie Siders Sanford, Ken Saville, Katherine F. Arreola, Zachary T. Ayres, David Basulto, Serena Benito, Christopher J. Breen, Julian A. Brix, Nicole Brown, Krissa K. Burton, Taree M. Chadwick, Matthew Chen, Katherine Chu, Beverly L. Corbett, Zerrick Dill, Meghan A. Faughender, Ashlynn D. Hickey, Joshua S. Julia, Shannon S. Kelty, Briggette B.K. Jobs, Bryce A. Krason, Brian Lam, Colin L. McCullough, Bryanna R. McEwen, Julian L. McKenzie, Kayla R. McQuinn, Chloe M. Moritz, Kristina E. Myers, Elizabeth M. Naugle, Ashley M. Nutter, Danielle Q. O'Conke, Megan T. O'Grondik, Kriya B. Patel, Sydney M. Rudowski, Emma N. Sberna, Gunner M. Stall, Tad L. Steiner, Eda Tanriverdi, Natalie Torres Patarroyo, Virginia L. Traster, Leo P. Tsai, Andrew J. Valenti, Mariela M. Villegas, Samantha M. Voors, Kierra K. Watson, Megan E. Wright, Jacob D. Kagey

MicroPubl Biol. 2019; 2019: 10.17912/micropub.biology.000118. Published online 2019 Jun 5. doi: 10.17912/micropub.biology.000118

PMCID:: PMC7252328

Article PDF–474K

Select item 719680320.

JNK-dependent intestinal barrier failure disrupts host–microbe homeostasis during tumorigenesis

Jun Zhou, Michael Boutros

Proc Natl Acad Sci U S A. 2020 Apr 28; 117(17): 9401–9412. Published online 2020 Apr 10. doi: 10.1073/pnas.1913976117

PMCID:: PMC7196803

Abstract Article PDF–2.3M

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