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Select item 111519291.

Osiris gene family defines the cuticle nanopatterns of Drosophila

Zhengkuan Sun, Sachi Inagaki, Keita Miyoshi, Kuniaki Saito, Shigeo Hayashi

Genetics. 2024 Jun; 227(2): iyae065. Published online 2024 Apr 23. doi: 10.1093/genetics/iyae065

PMCID:: PMC11151929

Abstract Article PDF–1.4M

Select item 98701572.

The Osiris family genes function as novel regulators of the tube maturation process in the Drosophila trachea

Aaron Scholl, Istri Ndoja, Niraj Dhakal, Doria Morante, Abigail Ivan, Darren Newman, Thomas Mossington, Christian Clemans, Sruthi Surapaneni, Michael Powers, Lan Jiang

PLoS Genet. 2023 Jan; 19(1): e1010571. Published online 2023 Jan 23. doi: 10.1371/journal.pgen.1010571

PMCID:: PMC9870157

Abstract Article PDF–6.3M

Select item 60632403.

Regulators of Long-Term Memory Revealed by Mushroom Body-Specific Gene Expression Profiling in Drosophila melanogaster

Yves F. Widmer, Adem Bilican, Rémy Bruggmann, Simon G. Sprecher

Genetics. 2018 Aug; 209(4): 1167–1181. Published online 2018 Jun 19. doi: 10.1534/genetics.118.301106

PMCID:: PMC6063240

Abstract Article PDF–1.4M

Select item 57748274.

An Ichor-dependent apical extracellular matrix regulates seamless tube shape and integrity

Jeffrey B. Rosa, Mark M. Metzstein, Amin S. Ghabrial

PLoS Genet. 2018 Jan; 14(1): e1007146. Published online 2018 Jan 8. doi: 10.1371/journal.pgen.1007146

PMCID:: PMC5774827

Abstract Article PDF–37M

Select item 57078055.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 56890026.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 47820527.

Diverse and pervasive subcellular distributions for both coding and long noncoding RNAs

Ronit Wilk, Jack Hu, Dmitry Blotsky, Henry M. Krause

Genes Dev. 2016 Mar 1; 30(5): 594–609. doi: 10.1101/gad.276931.115

PMCID:: PMC4782052

Abstract Article PDF–883K

Select item 45283308.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 45283299.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929

PMCID:: PMC4528329

Abstract Article PDF–4.9M

Select item 435288710.

The Release 6 reference sequence of the Drosophila melanogaster genome

Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker

Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114

PMCID:: PMC4352887

Abstract Article PDF–1022K

Select item 427152711.

Phylostratigraphic Bias Creates Spurious Patterns of Genome Evolution

Bryan A. Moyers, Jianzhi Zhang

Mol Biol Evol. 2015 Jan 1; 32(1): 258–267. Published online 2014 Oct 13. doi: 10.1093/molbev/msu286

Correction in:: Mol Biol Evol. 2016 Nov; 33(11): 3031.

PMCID:: PMC4271527

Abstract Article PDF–618K

Select item 358412412.

Identification of Genetic Modifiers of TDP-43 Neurotoxicity in Drosophila

Lihong Zhan, Keith A. Hanson, Sang Hwa Kim, Apeksha Tare, Randal S. Tibbetts

PLoS One. 2013; 8(2): e57214. Published online 2013 Feb 27. doi: 10.1371/journal.pone.0057214

PMCID:: PMC3584124

Abstract Article PDF–2.1M

Select item 353067713.

High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression

Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras

Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112

PMCID:: PMC3530677

Abstract Article PDF–1.5M

Select item 346946714.

The Many Landscapes of Recombination in Drosophila melanogaster

Josep M. Comeron, Ramesh Ratnappan, Samuel Bailin

PLoS Genet. 2012 Oct; 8(10): e1002905. Published online 2012 Oct 11. doi: 10.1371/journal.pgen.1002905

PMCID:: PMC3469467

Abstract Article PDF–1.6M

Select item 328433815.

Evolution of a Large, Conserved, and Syntenic Gene Family in Insects

Neethu Shah, Douglas R. Dorer, Etsuko N. Moriyama, Alan C. Christensen

G3 (Bethesda) 2012 Feb; 2(2): 313–319. Published online 2012 Feb 1. doi: 10.1534/g3.111.001412

PMCID:: PMC3284338

Abstract Article PDF–1.1M

Select item 321582916.

Trachealess (Trh) regulates all tracheal genes during Drosophila embryogenesis

SeYeon Chung, Cy Chavez, Deborah J. Andrew

Dev Biol. Author manuscript; available in PMC 2012 Dec 1.

Published in final edited form as: Dev Biol. 2011 Dec 1; 360(1): 160–172. Published online 2011 Sep 22. doi: 10.1016/j.ydbio.2011.09.014

PMCID:: PMC3215829

Abstract Article PDF–2.6M

Select item 282505317.

Sequence Finishing and Mapping of Drosophila melanogaster Heterochromatin

Roger A. Hoskins, Joseph W. Carlson, Cameron Kennedy, David Acevedo, Martha Evans-Holm, Erwin Frise, Kenneth H. Wan, Soo Park, Maria Mendez-Lago, Fabrizio Rossi, Alfredo Villasante, Patrizio Dimitri, Gary H. Karpen, Susan E. Celniker

Science. Author manuscript; available in PMC 2010 Feb 19.

Published in final edited form as: Science. 2007 Jun 15; 316(5831): 1625–1628. doi: 10.1126/science.1139816

PMCID:: PMC2825053

Abstract Article PDF–858K

Select item 281928018.

The Release 5.1 Annotation of Drosophila melanogaster Heterochromatin

Christopher D. Smith, ShengQiang Shu, Christopher J. Mungall, Gary H. Karpen

Science. Author manuscript; available in PMC 2010 Feb 10.

Published in final edited form as: Science. 2007 Jun 15; 316(5831): 1586. doi: 10.1126/science.1139815

Correction in:: volume 317 on page 1325

PMCID:: PMC2819280

Abstract Article PDF–1.3M

Select item 264394419.

Erect wing regulates synaptic growth in Drosophila by integration of multiple signaling pathways

Irmgard U Haussmann, Kalpana White, Matthias Soller

Genome Biol. 2008; 9(4): R73. Published online 2008 Apr 17. doi: 10.1186/gb-2008-9-4-r73

PMCID:: PMC2643944

Abstract Article PDF–1.7M

Select item 239062320.

Genomic Analysis of Adaptive Differentiation in Drosophila melanogaster

Thomas L. Turner, Mia T. Levine, Melissa L. Eckert, David J. Begun

Genetics. 2008 May; 179(1): 455–473. doi: 10.1534/genetics.107.083659

PMCID:: PMC2390623

Abstract Article PDF–1.6M

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