PMC Links for GEO Profiles (Select 22439430) - PMC

Lee-Hyang Kim, Ja-Young Kim, Yu-Ying Xu, Mi Ae Lim, Bon Seok Koo, Jung Hae Kim, Sung-Eun Yoon, Young-Joon Kim, Kwang-Wook Choi, Jae Won Chang, Sung-Tae Hong

Proc Natl Acad Sci U S A. 2023 Apr 11; 120(15): e2218361120. Published online 2023 Apr 4. doi: 10.1073/pnas.2218361120

PMCID:: PMC10104566

Abstract Article PDF–11M

Select item 86644864.

Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes

Ana López-Varea, Patricia Vega-Cuesta, Ana Ruiz-Gómez, Cristina M Ostalé, Cristina Molnar, Covadonga F Hevia, Mercedes Martín, Maria F Organista, Jesus de Celis, Joaquín Culí, Nuria Esteban, Jose F de Celis

G3 (Bethesda) 2021 Dec; 11(12): jkab349. Published online 2021 Oct 2. doi: 10.1093/g3journal/jkab349

PMCID:: PMC8664486

Abstract Article PDF–3.1M

Select item 85846705.

A behavioral screen for mediators of age-dependent TDP-43 neurodegeneration identifies SF2/SRSF1 among a group of potent suppressors in both neurons and glia

Jorge Azpurua, Enas Gad El-Karim, Marvel Tranquille, Josh Dubnau

PLoS Genet. 2021 Nov; 17(11): e1009882. Published online 2021 Nov 1. doi: 10.1371/journal.pgen.1009882

PMCID:: PMC8584670

Abstract Article PDF–1.4M

Select item 68990276.

Molecular profiling of stem cell-like female germ line cells in Drosophila delineates networks important for stemness and differentiation

Manu D. Tiwari, Daniela M. Zeitler, Gunter Meister, Andreas Wodarz

Biol Open. 2019 Nov 15; 8(11): bio046789. Published online 2019 Nov 12. doi: 10.1242/bio.046789

PMCID:: PMC6899027

Abstract Article PDF–2.9M

Select item 63674007.

Sensory neuron lineage mapping and manipulation in the Drosophila olfactory system

Phing Chian Chai, Steeve Cruchet, Leonore Wigger, Richard Benton

Nat Commun. 2019; 10: 643. Published online 2019 Feb 7. doi: 10.1038/s41467-019-08345-4

PMCID:: PMC6367400

Abstract Article PDF–6.3M

Select item 62786098.

Drosophila nucleostemin 3 is required to maintain larval neuroblast proliferation

Patrick W. Johnson, Chris Q. Doe, Sen-Lin Lai

Dev Biol. Author manuscript; available in PMC 2018 Dec 4.

Published in final edited form as: Dev Biol. 2018 Aug 1; 440(1): 1–12. Published online 2018 Apr 19. doi: 10.1016/j.ydbio.2018.04.014

PMCID:: PMC6278609

Abstract Article PDF–4.2M

Select item 57916639.

Widespread Rewiring of Genetic Networks upon Cancer Signaling Pathway Activation

Maximilian Billmann, Varun Chaudhary, Mostafa F. ElMaghraby, Bernd Fischer, Michael Boutros

Cell Syst. 2018 Jan 24; 6(1): 52–64.e4. doi: 10.1016/j.cels.2017.10.015

PMCID:: PMC5791663

Abstract Article

Select item 571014310.

Bivalent complexes of PRC1 with orthologs of BRD4 and MOZ/MORF target developmental genes in Drosophila

Hyuckjoon Kang, Youngsook L. Jung, Kyle A. McElroy, Barry M. Zee, Heather A. Wallace, Jessica L. Woolnough, Peter J. Park, Mitzi I. Kuroda

Genes Dev. 2017 Oct 1; 31(19): 1988–2002. doi: 10.1101/gad.305987.117

PMCID:: PMC5710143

Abstract Article PDF–14M

Select item 570780511.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 568900212.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 488884013.

The Enok acetyltransferase complex interacts with Elg1 and negatively regulates PCNA unloading to promote the G1/S transition

Fu Huang, Anita Saraf, Laurence Florens, Thomas Kusch, Selene K. Swanson, Leanne T. Szerszen, Ge Li, Arnob Dutta, Michael P. Washburn, Susan M. Abmayr, Jerry L. Workman

Genes Dev. 2016 May 15; 30(10): 1198–1210. doi: 10.1101/gad.271429.115

PMCID:: PMC4888840

Abstract Article PDF–1.9M

Select item 452833014.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 452832915.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929

PMCID:: PMC4528329

Abstract Article PDF–4.9M

Select item 447028216.

Sex comb on midleg (Scm) is a functional link between PcG-repressive complexes in Drosophila

Hyuckjoon Kang, Kyle A. McElroy, Youngsook Lucy Jung, Artyom A. Alekseyenko, Barry M. Zee, Peter J. Park, Mitzi I. Kuroda

Genes Dev. 2015 Jun 1; 29(11): 1136–1150. doi: 10.1101/gad.260562.115

PMCID:: PMC4470282

Abstract Article PDF–1.1M

Select item 440366717.

Transcription Factor Networks in Drosophila melanogaster

David Y. Rhee, Dong-Yeon Cho, Bo Zhai, Matthew Slattery, Lijia Ma, Julian Mintseris, Christina Y. Wong, Kevin P. White, Susan E. Celniker, Teresa M. Przytycka, Steven P. Gygi, Robert A. Obar, Spyros Artavanis-Tsakonas

Cell Rep. Author manuscript; available in PMC 2015 Apr 20.

Published in final edited form as: Cell Rep. 2014 Sep 25; 8(6): 2031–2043. Published online 2014 Sep 18. doi: 10.1016/j.celrep.2014.08.038

PMCID:: PMC4403667

Abstract Article PDF–1.3M

Select item 435288718.

The Release 6 reference sequence of the Drosophila melanogaster genome

Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker

Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114

PMCID:: PMC4352887

Abstract Article PDF–1022K

Select item 427152719.

Phylostratigraphic Bias Creates Spurious Patterns of Genome Evolution

Bryan A. Moyers, Jianzhi Zhang

Mol Biol Evol. 2015 Jan 1; 32(1): 258–267. Published online 2014 Oct 13. doi: 10.1093/molbev/msu286

Correction in:: Mol Biol Evol. 2016 Nov; 33(11): 3031.

PMCID:: PMC4271527

Abstract Article PDF–618K

Select item 353067720.

High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression

Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras

Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112

PMCID:: PMC3530677

Abstract Article PDF–1.5M

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