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Items: 1 to 20 of 37

1.
The relationship between muscle stem cells and motor neurons
Monika Zmojdzian, Krzysztof Jagla
Cell Mol Life Sci. 2021 Jun; 78(12): 5043–5049. Published online 2021 Apr 16. doi: 10.1007/s00018-021-03838-2
PMCID:
PMC11072985
AbstractArticlePDF–1.0M
2.
Shared enhancer gene regulatory networks between wound and oncogenic programs
Swann Floc'hlay, Ramya Balaji, Dimitrije Stanković, Valerie M Christiaens, Carmen Bravo González-Blas, Seppe De Winter, Gert J Hulselmans, Maxime De Waegeneer, Xiaojiang Quan, Duygu Koldere, Mardelle Atkins, Georg Halder, Mirka Uhlirova, Anne-Kathrin Classen, Stein Aerts
eLife. 2023; 12: e81173. Published online 2023 May 3. doi: 10.7554/eLife.81173
PMCID:
PMC10238094
AbstractArticlePDF–8.8M
3.
Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes
Ana López-Varea, Patricia Vega-Cuesta, Ana Ruiz-Gómez, Cristina M Ostalé, Cristina Molnar, Covadonga F Hevia, Mercedes Martín, Maria F Organista, Jesus de Celis, Joaquín Culí, Nuria Esteban, Jose F de Celis
G3 (Bethesda) 2021 Dec; 11(12): jkab349. Published online 2021 Oct 2. doi: 10.1093/g3journal/jkab349
PMCID:
PMC8664486
AbstractArticlePDF–3.1M
4.
Drosophila, an Integrative Model to Study the Features of Muscle Stem Cells in Development and Regeneration
Hadi Boukhatmi
Cells. 2021 Aug; 10(8): 2112. Published online 2021 Aug 17. doi: 10.3390/cells10082112
PMCID:
PMC8394675
AbstractArticlePDF–1.2M
5.
Three distinct mechanisms, Notch instructive, permissive, and independent, regulate the expression of two different pericardial genes to specify cardiac cell subtypes
Manoj Panta, Andrew J. Kump, John M. Dalloul, Kristopher R. Schwab, Shaad M. Ahmad
PLoS One. 2020; 15(10): e0241191. Published online 2020 Oct 27. doi: 10.1371/journal.pone.0241191
PMCID:
PMC7591092
AbstractArticlePDF–3.3M
6.
A single-cell atlas of the developing Drosophila ovary identifies follicle stem cell progenitors
Maija Slaidina, Torsten U. Banisch, Selena Gupta, Ruth Lehmann
Genes Dev. 2020 Feb 1; 34(3-4): 239–249. doi: 10.1101/gad.330464.119
PMCID:
PMC7000915
AbstractArticlePDF–8.6M
7.
A transcriptomics resource reveals a transcriptional transition during ordered sarcomere morphogenesis in flight muscle
Maria L Spletter, Christiane Barz, Assa Yeroslaviz, Xu Zhang, Sandra B Lemke, Adrien Bonnard, Erich Brunner, Giovanni Cardone, Konrad Basler, Bianca H Habermann, Frank Schnorrer
eLife. 2018; 7: e34058. Published online 2018 May 30. doi: 10.7554/eLife.34058
PMCID:
PMC6005683
AbstractArticlePDF–14M
8.
Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species
Piero Sanfilippo, Jiayu Wen, Eric C. Lai
Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0
PMCID:
PMC5707805
AbstractArticlePDF–3.2M
9.
Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster
Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira
RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117
PMCID:
PMC5689002
AbstractArticlePDF–4.0M
10.
mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster
Gildas Lepennetier, Francesco Catania
G3 (Bethesda) 2016 Jun; 6(6): 1617–1626. Published online 2016 Mar 28. doi: 10.1534/g3.116.029231
PMCID:
PMC4889658
AbstractArticlePDF–1.5M
11.
Discovery of progenitor cell signatures by time-series synexpression analysis during Drosophila embryonic cell immortalization
Mary-Lee Dequéant, Delphine Fagegaltier, Yanhui Hu, Kerstin Spirohn, Amanda Simcox, Gregory J. Hannon, Norbert Perrimon
Proc Natl Acad Sci U S A. 2015 Oct 20; 112(42): 12974–12979. Published online 2015 Oct 5. doi: 10.1073/pnas.1517729112
Correction in:
Proc Natl Acad Sci U S A. 2015 Nov 17; 112(46): E6408.
PMCID:
PMC4620889
AbstractArticlePDF–1.5M
12.
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders
Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937
PMCID:
PMC4528330
AbstractArticlePDF–2.2M
13.
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data
Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929
PMCID:
PMC4528329
AbstractArticlePDF–4.9M
14.
The myogenic repressor gene Holes in muscles is a direct transcriptional target of Twist and Tinman in the Drosophila embryonic mesoderm
Jennifer A. Elwell, TyAnna L. Lovato, Melanie M. Adams, Erica M. Baca, Thai Lee, Richard M. Cripps
Dev Biol. Author manuscript; available in PMC 2016 Apr 15.
Published in final edited form as: Dev Biol. 2015 Apr 15; 400(2): 266–276. Published online 2015 Feb 20. doi: 10.1016/j.ydbio.2015.02.005
PMCID:
PMC4385497
AbstractArticlePDF–1.1M
15.
The Release 6 reference sequence of the Drosophila melanogaster genome
Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker
Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114
PMCID:
PMC4352887
AbstractArticlePDF–1022K
16.
Phylostratigraphic Bias Creates Spurious Patterns of Genome Evolution
Bryan A. Moyers, Jianzhi Zhang
Mol Biol Evol. 2015 Jan 1; 32(1): 258–267. Published online 2014 Oct 13. doi: 10.1093/molbev/msu286
Correction in:
Mol Biol Evol. 2016 Nov; 33(11): 3031.
PMCID:
PMC4271527
AbstractArticlePDF–618K
17.
Machine learning classification of cell-specific cardiac enhancers uncovers developmental subnetworks regulating progenitor cell division and cell fate specification
Shaad M. Ahmad, Brian W. Busser, Di Huang, Elizabeth J. Cozart, Sébastien Michaud, Xianmin Zhu, Neal Jeffries, Anton Aboukhalil, Martha L. Bulyk, Ivan Ovcharenko, Alan M. Michelson
Development. 2014 Feb 15; 141(4): 878–888. doi: 10.1242/dev.101709
PMCID:
PMC3912831
AbstractArticle
18.
Microarray Comparison of Anterior and Posterior Drosophila Wing Imaginal Disc Cells Identifies Novel Wing Genes
Daniel M. Ibrahim, Brian Biehs, Thomas B. Kornberg, Ansgar Klebes
G3 (Bethesda) 2013 Aug; 3(8): 1353–1362. Published online 2013 Aug 1. doi: 10.1534/g3.113.006569
PMCID:
PMC3737175
AbstractArticlePDF–1.6M
19.
Genome-Wide Screens for In Vivo Tinman Binding Sites Identify Cardiac Enhancers with Diverse Functional Architectures
Hong Jin, Robert Stojnic, Boris Adryan, Anil Ozdemir, Angelike Stathopoulos, Manfred Frasch
PLoS Genet. 2013 Jan; 9(1): e1003195. Published online 2013 Jan 10. doi: 10.1371/journal.pgen.1003195
PMCID:
PMC3542182
AbstractArticlePDF–6.6M
20.
High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression
Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras
Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112
PMCID:
PMC3530677
AbstractArticlePDF–1.5M

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