PMC Links for GEO Profiles (Select 21478179) - PMC

Rupali Ugrankar, Jade Bowerman, Hanaa Hariri, Mintu Chandra, Kevin Chen, Marie-France Bossanyi, Sanchari Datta, Sean Rogers, Kaitlyn M. Eckert, Gonçalo Vale, Alexia Victoria, Joseph Fresquez, Jeffrey G. McDonald, Steve Jean, Brett M. Collins, W. Mike Henne

Dev Cell. Author manuscript; available in PMC 2020 Aug 25.

Published in final edited form as: Dev Cell. 2019 Sep 9; 50(5): 557–572.e5. Published online 2019 Aug 15. doi: 10.1016/j.devcel.2019.07.021

PMCID:: PMC7446143

Abstract Article PDF–1.9M

Select item 71227994.

Drosophila MARF1 ensures proper oocyte maturation by regulating nanos expression

Shinichi Kawaguchi, Mizuki Ueki, Toshie Kai

PLoS One. 2020; 15(4): e0231114. Published online 2020 Apr 3. doi: 10.1371/journal.pone.0231114

PMCID:: PMC7122799

Abstract Article PDF–2.6M

Select item 65341275.

Ubiquilins Regulate Autophagic Flux through mTOR Signaling and Lysosomal Acidification

Mümine Şentürk, Guang Lin, Zhongyuan Zuo, Dongxue Mao, Emma Watson, Antonios G. Mikos, Hugo J. Bellen

Nat Cell Biol. Author manuscript; available in PMC 2019 Aug 25.

Published in final edited form as: Nat Cell Biol. 2019 Mar; 21(3): 384–396. Published online 2019 Feb 25. doi: 10.1038/s41556-019-0281-x

PMCID:: PMC6534127

Abstract Article PDF–4.8M

Select item 60786046.

Human R1441C LRRK2 regulates the synaptic vesicle proteome and phosphoproteome in a Drosophila model of Parkinson’s disease

Md Shariful Islam, Hendrik Nolte, Wright Jacob, Anna B. Ziegler, Stefanie Pütz, Yael Grosjean, Karolina Szczepanowska, Aleksandra Trifunovic, Thomas Braun, Hermann Heumann, Rolf Heumann, Bernhard Hovemann, Darren J. Moore, Marcus Krüger

Hum Mol Genet. 2016 Dec 15; 25(24): 5365–5382. Published online 2016 Oct 29. doi: 10.1093/hmg/ddw352

PMCID:: PMC6078604

Abstract Article PDF–1.9M

Select item 57078057.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 56890028.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 54729189.

Inhalation toxicity of indoor air pollutants in Drosophila melanogaster using integrated transcriptomics and computational behavior analyses

Hyun-Jeong Eom, Yuedan Liu, Gyu-Suk Kwak, Muyoung Heo, Kyung Seuk Song, Yun Doo Chung, Tae-Soo Chon, Jinhee Choi

Sci Rep. 2017; 7: 46473. Published online 2017 Jun 16. doi: 10.1038/srep46473

PMCID:: PMC5472918

Abstract Article PDF–1.7M

Select item 467308710.

A novel role of Drosophila cytochrome P450-4e3 in permethrin insecticide tolerance

Selim Terhzaz, Pablo Cabrero, Robert A. Brinzer, Kenneth A. Halberg, Julian A.T. Dow, Shireen-A. Davies

Insect Biochem Mol Biol. 2015 Dec; 67: 38–46. doi: 10.1016/j.ibmb.2015.06.002

PMCID:: PMC4673087

Abstract Article

Select item 452833011.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 452832912.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929

PMCID:: PMC4528329

Abstract Article PDF–4.9M

Select item 452767113.

Effect of Low Doses (5-40 cGy) of Gamma-irradiation on Lifespan and Stress-related Genes Expression Profile in Drosophila melanogaster

Svetlana Zhikrevetskaya, Darya Peregudova, Anton Danilov, Ekaterina Plyusnina, George Krasnov, Alexey Dmitriev, Anna Kudryavtseva, Mikhail Shaposhnikov, Alexey Moskalev

PLoS One. 2015; 10(8): e0133840. Published online 2015 Aug 6. doi: 10.1371/journal.pone.0133840

PMCID:: PMC4527671

Abstract Article PDF–1.0M

Select item 435288714.

The Release 6 reference sequence of the Drosophila melanogaster genome

Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker

Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114

PMCID:: PMC4352887

Abstract Article PDF–1022K

Select item 423254515.

Whole-Genome Expression Analysis in the Third Instar Larval Midgut of Drosophila melanogaster

Thomas W. R. Harrop, Stephen L. Pearce, Phillip J. Daborn, Philip Batterham

G3 (Bethesda) 2014 Nov; 4(11): 2197–2205. Published online 2014 Sep 5. doi: 10.1534/g3.114.013870

PMCID:: PMC4232545

Abstract Article PDF–1.6M

Select item 381715616.

The 5′-3′ exoribonuclease Pacman (Xrn1) regulates expression of the heat shock protein Hsp67Bc and the microRNA miR-277–3p in Drosophila wing imaginal discs

Christopher I Jones, Dominic P Grima, Joseph A Waldron, Sue Jones, Hannah N Parker, Sarah F Newbury

RNA Biol. 2013 Aug 1; 10(8): 1345–1355. Published online 2013 Jun 13. doi: 10.4161/rna.25354

PMCID:: PMC3817156

Abstract Article PDF–1.3M

Select item 353067717.

High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression

Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras

Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112

PMCID:: PMC3530677

Abstract Article PDF–1.5M

Select item 346946718.

The Many Landscapes of Recombination in Drosophila melanogaster

Josep M. Comeron, Ramesh Ratnappan, Samuel Bailin

PLoS Genet. 2012 Oct; 8(10): e1002905. Published online 2012 Oct 11. doi: 10.1371/journal.pgen.1002905

PMCID:: PMC3469467

Abstract Article PDF–1.6M

Select item 341600219.

New Negative Feedback Regulators of Egfr Signaling in Drosophila

Jonathan P. Butchar, Donna Cain, Sathiya N. Manivannan, Andrea D. McCue, Liana Bonanno, Sarah Halula, Sharon Truesdell, Christina L. Austin, Thomas L. Jacobsen, Amanda Simcox

Genetics. 2012 Aug; 191(4): 1213–1226. doi: 10.1534/genetics.112.141093

PMCID:: PMC3416002

Abstract Article PDF–10M

Select item 331904820.

A Protein Complex Network of Drosophila melanogaster

K. G. Guruharsha, J. -F. Rual, B. Zhai, J. Mintseris, P. Vaidya, N. Vaidya, C. Beekman, C. Wong, D. Y. Rhee, O. Cenaj, E. McKillip, S. Shah, M. Stapleton, K. H. Wan, C. Yu, B. Parsa, J. W. Carlson, X. Chen, B. Kapadia, K. VijayRaghavan, S. P. Gygi, S. E. Celniker, R. A. Obar, S. Artavanis-Tsakonas

Cell. Author manuscript; available in PMC 2012 Oct 28.

Published in final edited form as: Cell. 2011 Oct 28; 147(3): 690–703. doi: 10.1016/j.cell.2011.08.047

PMCID:: PMC3319048

Abstract Article PDF–3.2M

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