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Items: 1 to 20 of 54

1.
Next-generation large-scale binary protein interaction network for Drosophila melanogaster
Hong-Wen Tang, Kerstin Spirohn, Yanhui Hu, Tong Hao, István A. Kovács, Yue Gao, Richard Binari, Donghui Yang-Zhou, Kenneth H. Wan, Joel S. Bader, Dawit Balcha, Wenting Bian, Benjamin W. Booth, Atina G. Coté, Steffi de Rouck, Alice Desbuleux, Kah Yong Goh, Dae-Kyum Kim, Jennifer J. Knapp, Wen Xing Lee, Irma Lemmens, Cathleen Li, Mian Li, Roujia Li, Hyobin Julianne Lim, Yifang Liu, Katja Luck, Dylan Markey, Carl Pollis, Sudharshan Rangarajan, Jonathan Rodiger, Sadie Schlabach, Yun Shen, Dayag Sheykhkarimli, Bridget TeeKing, Frederick P. Roth, Jan Tavernier, Michael A. Calderwood, David E. Hill, Susan E. Celniker, Marc Vidal, Norbert Perrimon, Stephanie E. Mohr
Nat Commun. 2023; 14: 2162. Published online 2023 Apr 15. doi: 10.1038/s41467-023-37876-0
PMCID:
PMC10105736
AbstractArticlePDF–3.2M
2.
Unraveling the Genetic Basis for the Rapid Diversification of Male Genitalia between Drosophila Species
Joanna F D Hagen, Cláudia C Mendes, Shamma R Booth, Javier Figueras Jimenez, Kentaro M Tanaka, Franziska A Franke, Luis Baudouin-Gonzalez, Amber M Ridgway, Saad Arif, Maria D S Nunes, Alistair P McGregor
Mol Biol Evol. 2021 Feb; 38(2): 437–448. Published online 2020 Sep 15. doi: 10.1093/molbev/msaa232
Correction in:
Mol Biol Evol. 2022 Oct; 39(10): msac207.
PMCID:
PMC7826188
AbstractArticlePDF–648K
3.
Polymorphism and Divergence of Novel Gene Expression Patterns in Drosophila melanogaster
Julie M. Cridland, Alex C. Majane, Hayley K. Sheehy, David J. Begun
Genetics. 2020 Sep; 216(1): 79–93. Published online 2020 Jul 31. doi: 10.1534/genetics.120.303515
PMCID:
PMC7463294
AbstractArticlePDF–1011K
4.
Painting of Fourth and the X-Linked 1.688 Satellite in D. melanogaster Is Involved in Chromosome-Wide Gene Regulation
Samaneh Ekhteraei-Tousi, Jacob Lewerentz, Jan Larsson
Cells. 2020 Feb; 9(2): 323. Published online 2020 Jan 30. doi: 10.3390/cells9020323
PMCID:
PMC7072490
AbstractArticlePDF–5.2M
5.
Exploitation of Drosophila Choriogenesis Process as a Model Cellular System for Assessment of Compound Toxicity: the Phloroglucinol Paradigm
Konstantinos E. Keramaris, Konstantinos Konstantopoulos, Lukas H. Margaritis, Athanassios D. Velentzas, Issidora S. Papassideri, Dimitrios J. Stravopodis
Sci Rep. 2020; 10: 242. Published online 2020 Jan 14. doi: 10.1038/s41598-019-57113-3
PMCID:
PMC6959335
AbstractArticlePDF–2.5M
6.
Nuclear Actin Is Required for Transcription during Drosophila Oogenesis
Maria Sokolova, Henna M. Moore, Bina Prajapati, Joseph Dopie, Leena Meriläinen, Mikko Honkanen, Rita Cerejeira Matos, Minna Poukkula, Ville Hietakangas, Maria K. Vartiainen
iScience. 2018 Nov 30; 9: 63–70. Published online 2018 Oct 15. doi: 10.1016/j.isci.2018.10.010
PMCID:
PMC6214840
AbstractArticlePDF–2.7M
7.
The indispensable contribution of s38 protein to ovarian-eggshell morphogenesis in Drosophila melanogaster
Athanassios D. Velentzas, Panagiotis D. Velentzas, Stamatia A. Katarachia, Athanasios K. Anagnostopoulos, Niki E. Sagioglou, Eleni V. Thanou, Maria M. Tsioka, Vassiliki E. Mpakou, Zoe Kollia, Vassilios E. Gavriil, Issidora S. Papassideri, George Th. Tsangaris, Alkiviadis-Constantinos Cefalas, Evangelia Sarantopoulou, Dimitrios J. Stravopodis
Sci Rep. 2018; 8: 16103. Published online 2018 Oct 31. doi: 10.1038/s41598-018-34532-2
PMCID:
PMC6208399
AbstractArticlePDF–5.1M
8.
Human R1441C LRRK2 regulates the synaptic vesicle proteome and phosphoproteome in a Drosophila model of Parkinson’s disease
Md Shariful Islam, Hendrik Nolte, Wright Jacob, Anna B. Ziegler, Stefanie Pütz, Yael Grosjean, Karolina Szczepanowska, Aleksandra Trifunovic, Thomas Braun, Hermann Heumann, Rolf Heumann, Bernhard Hovemann, Darren J. Moore, Marcus Krüger
Hum Mol Genet. 2016 Dec 15; 25(24): 5365–5382. Published online 2016 Oct 29. doi: 10.1093/hmg/ddw352
PMCID:
PMC6078604
AbstractArticlePDF–1.9M
9.
Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species
Piero Sanfilippo, Jiayu Wen, Eric C. Lai
Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0
PMCID:
PMC5707805
AbstractArticlePDF–3.2M
10.
DNA Replication Control During Drosophila Development: Insights into the Onset of S Phase, Replication Initiation, and Fork Progression
Brian L. Hua, Terry L. Orr-Weaver
Genetics. 2017 Sep; 207(1): 29–47. Published online 2017 Aug 31. doi: 10.1534/genetics.115.186627
PMCID:
PMC5586379
AbstractArticlePDF–1.2M
11.
Targeted Downregulation of s36 Protein Unearths its Cardinal Role in Chorion Biogenesis and Architecture during Drosophila melanogaster Oogenesis
Athanassios D. Velentzas, Panagiotis D. Velentzas, Niki E. Sagioglou, Eumorphia G. Konstantakou, Athanasios K. Anagnostopoulos, Maria M. Tsioka, Vassiliki E. Mpakou, Zoe Kollia, Christos Consoulas, Lukas H. Margaritis, Issidora S. Papassideri, George Th. Tsangaris, Evangelia Sarantopoulou, Alkiviadis-Constantinos Cefalas, Dimitrios J. Stravopodis
Sci Rep. 2016; 6: 35511. Published online 2016 Oct 18. doi: 10.1038/srep35511
PMCID:
PMC5067561
AbstractArticlePDF–2.6M
12.
The Insulator Protein Suppressor of Hairy Wing Is Required for Proper Ring Canal Development During Oogenesis in Drosophila
Shih-Jui Hsu, Maria P. Plata, Ben Ernest, Saghi Asgarifar, Mariano Labrador
Dev Biol. Author manuscript; available in PMC 2016 Aug 11.
Published in final edited form as: Dev Biol. 2015 Jul 1; 403(1): 57–68. Published online 2015 Apr 14. doi: 10.1016/j.ydbio.2015.03.024
PMCID:
PMC4981481
AbstractArticlePDF–1.1M
13.
mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster
Gildas Lepennetier, Francesco Catania
G3 (Bethesda) 2016 Jun; 6(6): 1617–1626. Published online 2016 Mar 28. doi: 10.1534/g3.116.029231
PMCID:
PMC4889658
AbstractArticlePDF–1.5M
14.
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders
Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937
PMCID:
PMC4528330
AbstractArticlePDF–2.2M
15.
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data
Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929
PMCID:
PMC4528329
AbstractArticlePDF–4.9M
16.
The Genetic Basis for Variation in Olfactory Behavior in Drosophila melanogaster
Gunjan H. Arya, Michael M. Magwire, Wen Huang, Yazmin L. Serrano-Negron, Trudy F.C. Mackay, Robert R.H. Anholt
Chem Senses. 2015 May; 40(4): 233–243. Published online 2015 Feb 15. doi: 10.1093/chemse/bjv001
PMCID:
PMC4398050
AbstractArticlePDF–8.9M
17.
Fundamental origins and limits for scaling a maternal morphogen gradient
Feng He, Chuanxian Wei, Honggang Wu, David Cheung, Renjie Jiao, Jun Ma
Nat Commun. Author manuscript; available in PMC 2015 Sep 26.
Published in final edited form as: Nat Commun. 2015; 6: 6679. Published online 2015 Mar 26. doi: 10.1038/ncomms7679
PMCID:
PMC4375784
AbstractArticlePDF–1.2M
18.
The Release 6 reference sequence of the Drosophila melanogaster genome
Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker
Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114
PMCID:
PMC4352887
AbstractArticlePDF–1022K
19.
Diversity and dynamics of the Drosophila transcriptome
James B. Brown, Nathan Boley, Robert Eisman, Gemma E. May, Marcus H. Stoiber, Michael O. Duff, Ben W. Booth, Jiayu Wen, Soo Park, Ana Maria Suzuki, Kenneth H. Wan, Charles Yu, Dayu Zhang, Joseph W. Carlson, Lucy Cherbas, Brian D. Eads, David Miller, Keithanne Mockaitis, Johnny Roberts, Carrie A. Davis, Erwin Frise, Ann S. Hammonds, Sara Olson, Sol Shenker, David Sturgill, Anastasia A. Samsonova, Richard Weiszmann, Garret Robinson, Juan Hernandez, Justen Andrews, Peter J. Bickel, Piero Carninci, Peter Cherbas, Thomas R. Gingeras, Roger A. Hoskins, Thomas C. Kaufman, Eric C. Lai, Brian Oliver, Norbert Perrimon, Brenton R. Graveley, Susan E. Celniker
Nature. Author manuscript; available in PMC 2015 Feb 28.
Published in final edited form as: Nature. 2014 Aug 28; 512(7515): 393–399. doi: 10.1038/nature12962
PMCID:
PMC4152413
AbstractArticlePDF–987K
20.
Following the ‘tracks’: Tramtrack69 regulates epithelial tube expansion in the Drosophila ovary through Paxillin, Dynamin, and the homeobox protein Mirror
Nathaniel C. Peters, Nathaniel H. Thayer, Scott A. Kerr, Martin Tompa, Celeste A. Berg
Dev Biol. Author manuscript; available in PMC 2014 Aug 21.
Published in final edited form as: Dev Biol. 2013 Jun 15; 378(2): 154–169. Published online 2013 Mar 30. doi: 10.1016/j.ydbio.2013.03.017
PMCID:
PMC4141043
AbstractArticlePDF–1.2M

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