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Items: 1 to 20 of 41

1.
Protein O-mannosylation: one sugar, several pathways, many functions
Melissa Koff, Pedro Monagas-Valentin, Boris Novikov, Ishita Chandel, Vladislav Panin
Glycobiology. 2023 Nov; 33(11): 911–926. Published online 2023 Aug 11. doi: 10.1093/glycob/cwad067
PMCID:
PMC10859634
AbstractArticlePDF–1.6M
2.
Protein tyrosine phosphatase 69D is a substrate of protein O-mannosyltransferases 1-2 that is required for the wiring of sensory axons in Drosophila
Pedro Monagas-Valentin, Robert Bridger, Ishita Chandel, Melissa Koff, Boris Novikov, Patrick Schroeder, Lance Wells, Vladislav Panin
J Biol Chem. 2023 Mar; 299(3): 102890. Published online 2023 Jan 10. doi: 10.1016/j.jbc.2023.102890
PMCID:
PMC9950532
AbstractArticlePDF–3.2M
3.
A genome-wide CRISPR screen identifies DPM1 as a modifier of DPAGT1 deficiency and ER stress
Hans M. Dalton, Raghuvir Viswanatha, Roderick Brathwaite, Jr., Jae Sophia Zuno, Alexys R. Berman, Rebekah Rushforth, Stephanie E. Mohr, Norbert Perrimon, Clement Y. Chow
PLoS Genet. 2022 Sep; 18(9): e1010430. Published online 2022 Sep 27. doi: 10.1371/journal.pgen.1010430
PMCID:
PMC9543880
AbstractArticlePDF–2.5M
4.
Exploiting a Y chromosome-linked Cas9 for sex selection and gene drive
Stephanie Gamez, Duverney Chaverra-Rodriguez, Anna Buchman, Nikolay P. Kandul, Stelia C. Mendez-Sanchez, Jared B. Bennett, Héctor M. Sánchez C., Ting Yang, Igor Antoshechkin, Jonny E. Duque, Philippos A. Papathanos, John M. Marshall, Omar S. Akbari
Nat Commun. 2021; 12: 7202. Published online 2021 Dec 10. doi: 10.1038/s41467-021-27333-1
PMCID:
PMC8664916
AbstractArticlePDF–2.8M
5.
CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans
Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang
Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119
PMCID:
PMC6961578
AbstractArticlePDF–3.6M
6.
O-linked glycosylation in Drosophila melanogaster
Liping Zhang, Kelly G. Ten Hagen
Curr Opin Struct Biol. Author manuscript; available in PMC 2020 Jun 1.
Published in final edited form as: Curr Opin Struct Biol. 2019 Jun; 56: 139–145. Published online 2019 Mar 7. doi: 10.1016/j.sbi.2019.01.014
PMCID:
PMC6656608
AbstractArticlePDF–440K
7.
Structures and functions of invertebrate glycosylation
Feifei Zhu, Dong Li, Keping Chen
Open Biol. 2019 Jan; 9(1): 180232. Published online 2019 Jan 30. doi: 10.1098/rsob.180232
PMCID:
PMC6367135
AbstractArticlePDF–981K
8.
Model Organisms in the Fight against Muscular Dystrophy: Lessons from Drosophila and Zebrafish
Emilie Plantié, Marta Migocka-Patrzałek, Małgorzata Daczewska, Krzysztof Jagla
Molecules. 2015 Apr; 20(4): 6237–6253. Published online 2015 Apr 9. doi: 10.3390/molecules20046237
PMCID:
PMC6272363
AbstractArticlePDF–765K
9.
Protein O-Mannosyltransferases Affect Sensory Axon Wiring and Dynamic Chirality of Body Posture in the Drosophila Embryo
Ryan Baker, Naosuke Nakamura, Ishita Chandel, Brooke Howell, Dmitry Lyalin, Vladislav M. Panin
J Neurosci. 2018 Feb 14; 38(7): 1850–1865. doi: 10.1523/JNEUROSCI.0346-17.2017
PMCID:
PMC5815462
AbstractArticlePDF–11M
10.
Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species
Piero Sanfilippo, Jiayu Wen, Eric C. Lai
Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0
PMCID:
PMC5707805
AbstractArticlePDF–3.2M
11.
Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster
Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira
RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117
PMCID:
PMC5689002
AbstractArticlePDF–4.0M
12.
Cold acclimation wholly reorganizes the Drosophila melanogaster transcriptome and metabolome
Heath A. MacMillan, Jose M. Knee, Alice B. Dennis, Hiroko Udaka, Katie E. Marshall, Thomas J. S. Merritt, Brent J. Sinclair
Sci Rep. 2016; 6: 28999. Published online 2016 Jun 30. doi: 10.1038/srep28999
PMCID:
PMC4928047
AbstractArticlePDF–3.1M
13.
Phenotype-based clustering of glycosylation-related genes by RNAi-mediated gene silencing
Miki Yamamoto-Hino, Hideki Yoshida, Tomomi Ichimiya, Sho Sakamura, Megumi Maeda, Yoshinobu Kimura, Norihiko Sasaki, Kiyoko F Aoki-Kinoshita, Akiko Kinoshita-Toyoda, Hidenao Toyoda, Ryu Ueda, Shoko Nishihara, Satoshi Goto
Genes Cells. 2015 Jun; 20(6): 521–542. Published online 2015 May 4. doi: 10.1111/gtc.12246
PMCID:
PMC4682476
AbstractArticlePDF–1.1M
14.
Genes conserved in bilaterians but jointly lost with Myc during nematode evolution are enriched in cell proliferation and cell migration functions
Albert J. Erives
Dev Genes Evol. 2015; 225(5): 259–273. Published online 2015 Jul 15. doi: 10.1007/s00427-015-0508-1
PMCID:
PMC4568025
AbstractArticlePDF–2.8M
15.
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders
Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937
PMCID:
PMC4528330
AbstractArticlePDF–2.2M
16.
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data
Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929
PMCID:
PMC4528329
AbstractArticlePDF–4.9M
17.
The Release 6 reference sequence of the Drosophila melanogaster genome
Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker
Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114
PMCID:
PMC4352887
AbstractArticlePDF–1022K
18.
Genome-wide analyses of Shavenbaby target genes reveals distinct features of enhancer organization
Delphine Menoret, Marc Santolini, Isabelle Fernandes, Rebecca Spokony, Jennifer Zanet, Ignacio Gonzalez, Yvan Latapie, Pierre Ferrer, Hervé Rouault, Kevin P White, Philippe Besse, Vincent Hakim, Stein Aerts, Francois Payre, Serge Plaza
Genome Biol. 2013; 14(8): R86. Published online 2013 Aug 23. doi: 10.1186/gb-2013-14-8-r86
PMCID:
PMC4053989
AbstractArticlePDF–2.2M
19.
The N’s and O’s of Drosophila Glycoprotein Glycobiology
Toshihiko Katoh, Michael Tiemeyer
Glycoconj J. Author manuscript; available in PMC 2014 Jan 1.
Published in final edited form as: Glycoconj J. 2013 Jan; 30(1): 57–66. Published online 2012 Aug 31. doi: 10.1007/s10719-012-9442-x
PMCID:
PMC3548036
AbstractArticlePDF–1.0M
20.
High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression
Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras
Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112
PMCID:
PMC3530677
AbstractArticlePDF–1.5M

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