PMC Links for GEO Profiles (Select 21002334) - PMC

Maria Litovchenko, Antonio C. A. Meireles-Filho, Michael V. Frochaux, Roel P. J. Bevers, Alessio Prunotto, Ane Martin Anduaga, Brian Hollis, Vincent Gardeux, Virginie S. Braman, Julie M. C. Russeil, Sebastian Kadener, Matteo dal Peraro, Bart Deplancke

Sci Adv. 2021 Jan; 7(5): eabc3781. Published online 2021 Jan 29. doi: 10.1126/sciadv.abc3781

PMCID:: PMC7846174

Abstract Article PDF–5.0M

Select item 74772964.

Rosy Beginnings: Studying Peroxisomes in Drosophila

C. Pridie, Kazuki Ueda, Andrew J. Simmonds

Front Cell Dev Biol. 2020; 8: 835. Published online 2020 Aug 25. doi: 10.3389/fcell.2020.00835

PMCID:: PMC7477296

Abstract Article PDF–1.1M

Select item 67794125.

Accurate genome-wide predictions of spatio-temporal gene expression during embryonic development

Jian Zhou, Ignacio E. Schor, Victoria Yao, Chandra L. Theesfeld, Raquel Marco-Ferreres, Alicja Tadych, Eileen E. M. Furlong, Olga G. Troyanskaya

PLoS Genet. 2019 Sep; 15(9): e1008382. Published online 2019 Sep 25. doi: 10.1371/journal.pgen.1008382

PMCID:: PMC6779412

Abstract Article PDF–5.9M

Select item 58989126.

A gene-specific T2A-GAL4 library for Drosophila

Pei-Tseng Lee, Jonathan Zirin, Oguz Kanca, Wen-Wen Lin, Karen L Schulze, David Li-Kroeger, Rong Tao, Colby Devereaux, Yanhui Hu, Verena Chung, Ying Fang, Yuchun He, Hongling Pan, Ming Ge, Zhongyuan Zuo, Benjamin E Housden, Stephanie E Mohr, Shinya Yamamoto, Robert W Levis, Allan C Spradling, Norbert Perrimon, Hugo J Bellen

eLife. 2018; 7: e35574. Published online 2018 Mar 22. doi: 10.7554/eLife.35574

PMCID:: PMC5898912

Abstract Article PDF–4.9M

Select item 57078057.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 56890028.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 52536999.

Drosophila FIT is a protein-specific satiety hormone essential for feeding control

Jinghan Sun, Chang Liu, Xiaobing Bai, Xiaoting Li, Jingyun Li, Zhiping Zhang, Yunpeng Zhang, Jing Guo, Yan Li

Nat Commun. 2017; 8: 14161. Published online 2017 Jan 19. doi: 10.1038/ncomms14161

PMCID:: PMC5253699

Abstract Article PDF–1.2M

Select item 492804710.

Cold acclimation wholly reorganizes the Drosophila melanogaster transcriptome and metabolome

Heath A. MacMillan, Jose M. Knee, Alice B. Dennis, Hiroko Udaka, Katie E. Marshall, Thomas J. S. Merritt, Brent J. Sinclair

Sci Rep. 2016; 6: 28999. Published online 2016 Jun 30. doi: 10.1038/srep28999

PMCID:: PMC4928047

Abstract Article PDF–3.1M

Select item 488965811.

mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster

Gildas Lepennetier, Francesco Catania

G3 (Bethesda) 2016 Jun; 6(6): 1617–1626. Published online 2016 Mar 28. doi: 10.1534/g3.116.029231

PMCID:: PMC4889658

Abstract Article PDF–1.5M

Select item 474939212.

Genetic architecture of natural variation in cuticular hydrocarbon composition in Drosophila melanogaster

Lauren M Dembeck, Katalin Böröczky, Wen Huang, Coby Schal, Robert R H Anholt, Trudy F C Mackay

eLife. 2015; 4: e09861. Published online 2015 Nov 14. doi: 10.7554/eLife.09861

PMCID:: PMC4749392

Abstract Article PDF–6.3M

Select item 452833013.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 452832914.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929

PMCID:: PMC4528329

Abstract Article PDF–4.9M

Select item 435288715.

The Release 6 reference sequence of the Drosophila melanogaster genome

Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker

Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114

PMCID:: PMC4352887

Abstract Article PDF–1022K

Select item 406926316.

Dietary switch reveals fast coordinated gene expression changes in Drosophila melanogaster

Rachel Whitaker, M. Pilar Gil, Feifei Ding, Marc Tatar, Stephen L. Helfand, Nicola Neretti

Aging (Albany NY) 2014 May; 6(5): 355–368. Published online 2014 May 14. doi: 10.18632/aging.100662

PMCID:: PMC4069263

Abstract Article PDF–2.4M

Select item 404507317.

Microbiota-Induced Changes in Drosophila melanogaster Host Gene Expression and Gut Morphology

Nichole A. Broderick, Nicolas Buchon, Bruno Lemaitre

mBio. 2014 May-Jun; 5(3): e01117-14. Published online 2014 May 27. doi: 10.1128/mBio.01117-14

PMCID:: PMC4045073

Abstract Article PDF–2.2M

Select item 390979018.

A conserved role for Snail as a potentiator of active transcription

Martina Rembold, Lucia Ciglar, J. Omar Yáñez-Cuna, Robert P. Zinzen, Charles Girardot, Ankit Jain, Michael A. Welte, Alexander Stark, Maria Leptin, Eileen E.M. Furlong

Genes Dev. 2014 Jan 15; 28(2): 167–181. doi: 10.1101/gad.230953.113

PMCID:: PMC3909790

Abstract Article PDF–2.0M

Select item 353067719.

High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression

Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras

Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112

PMCID:: PMC3530677

Abstract Article PDF–1.5M

Select item 346946720.

The Many Landscapes of Recombination in Drosophila melanogaster

Josep M. Comeron, Ramesh Ratnappan, Samuel Bailin

PLoS Genet. 2012 Oct; 8(10): e1002905. Published online 2012 Oct 11. doi: 10.1371/journal.pgen.1002905

PMCID:: PMC3469467

Abstract Article PDF–1.6M

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