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Items: 17

1.
SIN-3 acts in distinct complexes to regulate the germline transcriptional program in Caenorhabditis elegans
Valerie J. Robert, Matthieu Caron, Loic Gely, Annie Adrait, Victoria Pakulska, Yohann Couté, Manon Chevalier, Christian G. Riedel, Cecile Bedet, Francesca Palladino
Development. 2023 Nov 1; 150(21): dev201755. Published online 2023 Oct 17. doi: 10.1242/dev.201755
PMCID:
PMC10617626
AbstractArticle
2.
Post-transcriptional repression of CFP-1 expands the regulatory repertoire of LIN-41/TRIM71
Pooja Kumari, Lars Harald Thuestad, Rafal Ciosk
Nucleic Acids Res. 2023 Oct 27; 51(19): 10668–10680. Published online 2023 Sep 6. doi: 10.1093/nar/gkad729
PMCID:
PMC10602926
AbstractArticlePDF–1.4M
3.
A transcriptional cofactor regulatory network for the C. elegans intestine
Brent B Horowitz, Shivani Nanda, Albertha J M Walhout
G3 (Bethesda) 2023 Jul; 13(7): jkad096. Published online 2023 Apr 29. doi: 10.1093/g3journal/jkad096
PMCID:
PMC10320766
AbstractArticlePDF–1.9M
4.
The in vivo functional significance of PUF hub partnerships in C. elegans germline stem cells
Ahlan S. Ferdous, Stephany J. Costa Dos Santos, Charlotte R. Kanzler, Heaji Shin, Brian H. Carrick, Sarah L. Crittenden, Marvin Wickens, Judith Kimble
Development. 2023 May 1; 150(9): dev201705. Published online 2023 May 9. doi: 10.1242/dev.201705
PMCID:
PMC10259659
AbstractArticle
5.
CCR4‐NOT subunit CCF‐1/CNOT7 promotes transcriptional activation to multiple stress responses in Caenorhabditis elegans
Hadi Tabarraei, Brandon M. Waddell, Kelly Raymond, Sydney M. Murray, Ying Wang, Keith P. Choe, Cheng‐Wei Wu
Aging Cell. 2023 Apr; 22(4): e13795. Published online 2023 Feb 16. doi: 10.1111/acel.13795
PMCID:
PMC10086529
AbstractArticlePDF–18M
6.
Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules
Patricia Giselle Cipriani, Olivia Bay, John Zinno, Michelle Gutwein, Hin Hark Gan, Vinay K Mayya, George Chung, Jia-Xuan Chen, Hala Fahs, Yu Guan, Thomas F Duchaine, Matthias Selbach, Fabio Piano, Kristin C Gunsalus
eLife. 2021; 10: e60833. Published online 2021 Jul 5. doi: 10.7554/eLife.60833
PMCID:
PMC8331183
AbstractArticlePDF–8.5M
7.
EPIC: Software Toolkit for Elution Profile-Based Inference of Protein Complexes
Lucas ZhongMing Hu, Florian Goebels, June H. Tan, Eric Wolf, Uros Kuzmanov, Cuihong Wan, Sadhna Phanse, Changjiang Xu, Mike Schertzberg, Andrew G. Fraser, Gary D. Bader, Andrew Emili
Nat Methods. Author manuscript; available in PMC 2021 Mar 26.
Published in final edited form as: Nat Methods. 2019 Aug; 16(8): 737–742. Published online 2019 Jul 15. doi: 10.1038/s41592-019-0461-4
PMCID:
PMC7995176
AbstractArticlePDF–1.0M
8.
Stage-specific combinations of opposing poly(A) modifying enzymes guide gene expression during early oogenesis
Marco Nousch, Assa Yeroslaviz, Christian R Eckmann
Nucleic Acids Res. 2019 Nov 18; 47(20): 10881–10893. Published online 2019 Sep 12. doi: 10.1093/nar/gkz787
PMCID:
PMC6845980
AbstractArticlePDF–4.7M
9.
OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes
Woojin Kim, Ryan S. Underwood, Iva Greenwald, Daniel D. Shaye
Genetics. 2018 Oct; 210(2): 445–461. Published online 2018 Aug 17. doi: 10.1534/genetics.118.301307
PMCID:
PMC6216590
AbstractArticlePDF–1.4M
10.
LIN-41 and OMA Ribonucleoprotein Complexes Mediate a Translational Repression-to-Activation Switch Controlling Oocyte Meiotic Maturation and the Oocyte-to-Embryo Transition in Caenorhabditis elegans
Tatsuya Tsukamoto, Micah D. Gearhart, Caroline A. Spike, Gabriela Huelgas-Morales, Makaela Mews, Peter R. Boag, Traude H. Beilharz, David Greenstein
Genetics. 2017 Aug; 206(4): 2007–2039. Published online 2017 Jun 1. doi: 10.1534/genetics.117.203174
PMCID:
PMC5560804
AbstractArticlePDF–3.9M
11.
In Vivo Interaction Proteomics in Caenorhabditis elegans Embryos Provides New Insights into P Granule Dynamics
Jia-Xuan Chen, Patricia G. Cipriani, Desirea Mecenas, Jolanta Polanowska, Fabio Piano, Kristin C. Gunsalus, Matthias Selbach
Mol Cell Proteomics. 2016 May; 15(5): 1642–1657. Published online 2016 Feb 24. doi: 10.1074/mcp.M115.053975
PMCID:
PMC4858945
AbstractArticlePDF–3.1M
12.
A quantitative genome-wide RNAi screen in C. elegans for antifungal innate immunity genes
Olivier Zugasti, Nishant Thakur, Jérôme Belougne, Barbara Squiban, C. Léopold Kurz, Julien Soulé, Shizue Omi, Laurent Tichit, Nathalie Pujol, Jonathan J. Ewbank
BMC Biol. 2016; 14: 35. Published online 2016 Apr 29. doi: 10.1186/s12915-016-0256-3
PMCID:
PMC4850687
AbstractArticlePDF–2.9M
13.
OrthoList: A Compendium of C. elegans Genes with Human Orthologs
Daniel D. Shaye, Iva Greenwald
PLoS One. 2011; 6(5): e20085. Published online 2011 May 25. doi: 10.1371/journal.pone.0020085
Correction in:
PLoS One. 2014; 9(1): 10.1371/annotation/f5ffb738-a176-4a43-b0e0-249cdea45fe0.
PMCID:
PMC3102077
AbstractArticlePDF–530K
14.
FBF and Its Dual Control of gld-1 Expression in the Caenorhabditis elegans Germline
Nayoung Suh, Sarah L. Crittenden, Aaron Goldstrohm, Brad Hook, Beth Thompson, Marvin Wickens, Judith Kimble
Genetics. 2009 Apr; 181(4): 1249–1260. doi: 10.1534/genetics.108.099440
PMCID:
PMC2666496
AbstractArticlePDF–2.2M
15.
Large-scale RNAi screens identify novel genes that interact with the C. elegans retinoblastoma pathway as well as splicing-related components with synMuv B activity
Julian Ceron, Jean-François Rual, Abha Chandra, Denis Dupuy, Marc Vidal, Sander van den Heuvel
BMC Dev Biol. 2007; 7: 30. Published online 2007 Apr 6. doi: 10.1186/1471-213X-7-30
PMCID:
PMC1863419
AbstractArticlePDF–1.4M
16.
A Map of the Interactome Network of the Metazoan C. elegans
Siming Li, Christopher M. Armstrong, Nicolas Bertin, Hui Ge, Stuart Milstein, Mike Boxem, Pierre-Olivier Vidalain, Jing-Dong J. Han, Alban Chesneau, Tong Hao, Debra S. Goldberg, Ning Li, Monica Martinez, Jean-François Rual, Philippe Lamesch, Lai Xu, Muneesh Tewari, Sharyl L. Wong, Lan V. Zhang, Gabriel F. Berriz, Laurent Jacotot, Philippe Vaglio, Jérôme Reboul, Tomoko Hirozane-Kishikawa, Qianru Li, Harrison W. Gabel, Ahmed Elewa, Bridget Baumgartner, Debra J. Rose, Haiyuan Yu, Stephanie Bosak, Reynaldo Sequerra, Andrew Fraser, Susan E. Mango, William M. Saxton, Susan Strome, Sander van den Heuvel, Fabio Piano, Jean Vandenhaute, Claude Sardet, Mark Gerstein, Lynn Doucette-Stamm, Kristin C. Gunsalus, J. Wade Harper, Michael E. Cusick, Frederick P. Roth, David E. Hill, Marc Vidal
Science. Author manuscript; available in PMC 2006 Dec 14.
Published in final edited form as: Science. 2004 Jan 23; 303(5657): 540–543. Published online 2004 Jan 2. doi: 10.1126/science.1091403
PMCID:
PMC1698949
AbstractArticlePDF–1.4M
17.
Caenorhabditis elegans Decapping Proteins: Localization and Functional Analysis of Dcp1, Dcp2, and DcpS during Embryogenesis
Sabbi Lall, Fabio Piano, Richard E. Davis
Mol Biol Cell. 2005 Dec; 16(12): 5880–5890. doi: 10.1091/mbc.E05-07-0622
PMCID:
PMC1289429
AbstractArticlePDF–241K

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