PMC Links for GEO Profiles (Select 19464188) - PMC

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Items: 12

Select item 89672761.

A proteomics approach identifies novel resident zebrafish Balbiani body proteins Cirbpa and Cirbpb

Allison H Jamieson-Lucy, Manami Kobayashi, Y James Aykit, Yaniv Elkouby, Matias Escobar-Aguirre, Charles Vejnar, Antonio Giraldez, Mary C Mullins

Dev Biol. Author manuscript; available in PMC 2023 Apr 1.

Published in final edited form as: Dev Biol. 2022 Apr; 484: 1–11. Published online 2022 Jan 20. doi: 10.1016/j.ydbio.2022.01.006

PMCID:: PMC8967276

Abstract Article PDF–3.1M

Select item 53379742.

Evolution of complexity in the zebrafish synapse proteome

Àlex Bayés, Mark O. Collins, Rita Reig-Viader, Gemma Gou, David Goulding, Abril Izquierdo, Jyoti S. Choudhary, Richard D. Emes, Seth G. N. Grant

Nat Commun. 2017; 8: 14613. Published online 2017 Mar 2. doi: 10.1038/ncomms14613

PMCID:: PMC5337974

Abstract Article PDF–2.0M

Select item 51112293.

MicroRNAs regulate gene plasticity during cold shock in zebrafish larvae

I-Chen Hung, Yu-Chuan Hsiao, H. Sunny Sun, Tsung-Ming Chen, Shyh-Jye Lee

BMC Genomics. 2016; 17: 922. Published online 2016 Nov 15. doi: 10.1186/s12864-016-3239-4

PMCID:: PMC5111229

Abstract Article PDF–2.4M

Select item 48707324.

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database

Jeremy Pasquier, Cédric Cabau, Thaovi Nguyen, Elodie Jouanno, Dany Severac, Ingo Braasch, Laurent Journot, Pierre Pontarotti, Christophe Klopp, John H. Postlethwait, Yann Guiguen, Julien Bobe

BMC Genomics. 2016; 17: 368. Published online 2016 May 18. doi: 10.1186/s12864-016-2709-z

PMCID:: PMC4870732

Abstract Article PDF–1.8M

Select item 46341375.

RFX transcription factors are essential for hearing in mice

Ran Elkon, Beatrice Milon, Laura Morrison, Manan Shah, Sarath Vijayakumar, Manoj Racherla, Carmen C. Leitch, Lorna Silipino, Shadan Hadi, Michèle Weiss-Gayet, Emmanuèle Barras, Christoph D. Schmid, Aouatef Ait-Lounis, Ashley Barnes, Yang Song, David J. Eisenman, Efrat Eliyahu, Gregory I. Frolenkov, Scott E. Strome, Bénédicte Durand, Norann A. Zaghloul, Sherri M. Jones, Walter Reith, Ronna Hertzano

Nat Commun. 2015; 6: 8549. Published online 2015 Oct 15. doi: 10.1038/ncomms9549

PMCID:: PMC4634137

Abstract Article PDF–5.5M

Select item 46270656.

Global identification of the genetic networks and cis-regulatory elements of the cold response in zebrafish

Peng Hu, Mingli Liu, Dong Zhang, Jinfeng Wang, Hongbo Niu, Yimeng Liu, Zhichao Wu, Bingshe Han, Wanying Zhai, Yu Shen, Liangbiao Chen

Nucleic Acids Res. 2015 Oct 30; 43(19): 9198–9213. Published online 2015 Jul 30. doi: 10.1093/nar/gkv780

PMCID:: PMC4627065

Abstract Article PDF–1.7M

Select item 33642497.

Transcriptomic Characterization of Temperature Stress Responses in Larval Zebrafish

Yong Long, Linchun Li, Qing Li, Xiaozhen He, Zongbin Cui

PLoS One. 2012; 7(5): e37209. Published online 2012 May 30. doi: 10.1371/journal.pone.0037209

PMCID:: PMC3364249

Abstract Article PDF–1.4M

Select item 31780598.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 31494999.

Zebrafish mRNA sequencing deciphers novelties in transcriptome dynamics during maternal to zygotic transition

Håvard Aanes, Cecilia L. Winata, Chi Ho Lin, Jieqi P. Chen, Kandhadayar G. Srinivasan, Serene G.P. Lee, Adrian Y.M. Lim, Hajira Shreen Hajan, Philippe Collas, Guillaume Bourque, Zhiyuan Gong, Vladimir Korzh, Peter Aleström, Sinnakaruppan Mathavan

Genome Res. 2011 Aug; 21(8): 1328–1338. doi: 10.1101/gr.116012.110

PMCID:: PMC3149499

Abstract Article PDF–1.7M

Select item 308087810.

Somatic Mutagenesis with a Sleeping Beauty Transposon System Leads to Solid Tumor Formation in Zebrafish

Maura McGrail, Julia M. Hatler, Xianyan Kuang, Hsin-Kai Liao, Kishore Nannapaneni, Kristin E. Noack Watt, Juli D. Uhl, David A. Largaespada, Erik Vollbrecht, Todd E. Scheetz, Adam J. Dupuy, Jesse M. Hostetter, Jeffrey J. Essner

PLoS One. 2011; 6(4): e18826. Published online 2011 Apr 21. doi: 10.1371/journal.pone.0018826

PMCID:: PMC3080878

Abstract Article PDF–2.0M

Select item 119954611.

The zebrafish gene map defines ancestral vertebrate chromosomes

Ian G. Woods, Catherine Wilson, Brian Friedlander, Patricia Chang, Daengnoy K. Reyes, Rebecca Nix, Peter D. Kelly, Felicia Chu, John H. Postlethwait, William S. Talbot

Genome Res. 2005 Sep; 15(9): 1307–1314. doi: 10.1101/gr.4134305