PMC Links for GEO Profiles (Select 19464042) - PMC

Select item 59725181.

The histone demethylase Jmjd3 regulates zebrafish myeloid development by promoting spi1 expression

Shan-He Yu, Kang-Yong Zhu, Fan Zhang, Juan Wang, Hao Yuan, Yi Chen, Yi Jin, Mei Dong, Lei Wang, Xiao-E Jia, Lei Gao, Zhi-Wei Dong, Chun-Guang Ren, Li-Ting Chen, Qiu-Hua Huang, Min Deng, Leonard I. Zon, Yi Zhou, Jiang Zhu, Peng-Fei Xu, Ting-Xi Liu

Biochim Biophys Acta. Author manuscript; available in PMC 2018 May 29.

Published in final edited form as: Biochim Biophys Acta. 2018 Feb; 1861(2): 106–116. Published online 2018 Jan 31. doi: 10.1016/j.bbagrm.2017.12.009

PMCID:: PMC5972518

Abstract Article PDF–2.1M

Select item 53434132.

Whole exome sequencing coupled with unbiased functional analysis reveals new Hirschsprung disease genes

Hongsheng Gui, Duco Schriemer, William W. Cheng, Rajendra K. Chauhan, Guillermo Antiňolo, Courtney Berrios, Marta Bleda, Alice S. Brooks, Rutger W. W. Brouwer, Alan J. Burns, Stacey S. Cherny, Joaquin Dopazo, Bart J. L. Eggen, Paola Griseri, Binta Jalloh, Thuy-Linh Le, Vincent C. H. Lui, Berta Luzón-Toro, Ivana Matera, Elly S. W. Ngan, Anna Pelet, Macarena Ruiz-Ferrer, Pak C. Sham, Iain T. Shepherd, Man-Ting So, Yunia Sribudiani, Clara S. M. Tang, Mirjam C. G. N. van den Hout, Herma C. van der Linde, Tjakko J. van Ham, Wilfred F. J. van IJcken, Joke B. G. M. Verheij, Jeanne Amiel, Salud Borrego, Isabella Ceccherini, Aravinda Chakravarti, Stanislas Lyonnet, Paul K. H. Tam, Maria-Mercè Garcia-Barceló, Robert M. W. Hofstra

Genome Biol. 2017; 18: 48. Published online 2017 Mar 8. doi: 10.1186/s13059-017-1174-6

PMCID:: PMC5343413

Abstract Article PDF–1.1M

Select item 49753923.

Variation of DNA Methylome of Zebrafish Cells under Cold Pressure

Bingshe Han, Wenhao Li, Zuozhou Chen, Qiongqiong Xu, Juntao Luo, Yingdi Shi, Xiaoxia Li, Xiaonan Yan, Junfang Zhang

PLoS One. 2016; 11(8): e0160358. Published online 2016 Aug 5. doi: 10.1371/journal.pone.0160358

PMCID:: PMC4975392

Abstract Article PDF–2.3M

Select item 48707324.

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database

Jeremy Pasquier, Cédric Cabau, Thaovi Nguyen, Elodie Jouanno, Dany Severac, Ingo Braasch, Laurent Journot, Pierre Pontarotti, Christophe Klopp, John H. Postlethwait, Yann Guiguen, Julien Bobe

BMC Genomics. 2016; 17: 368. Published online 2016 May 18. doi: 10.1186/s12864-016-2709-z

PMCID:: PMC4870732

Abstract Article PDF–1.8M

Select item 46341375.

RFX transcription factors are essential for hearing in mice

Ran Elkon, Beatrice Milon, Laura Morrison, Manan Shah, Sarath Vijayakumar, Manoj Racherla, Carmen C. Leitch, Lorna Silipino, Shadan Hadi, Michèle Weiss-Gayet, Emmanuèle Barras, Christoph D. Schmid, Aouatef Ait-Lounis, Ashley Barnes, Yang Song, David J. Eisenman, Efrat Eliyahu, Gregory I. Frolenkov, Scott E. Strome, Bénédicte Durand, Norann A. Zaghloul, Sherri M. Jones, Walter Reith, Ronna Hertzano

Nat Commun. 2015; 6: 8549. Published online 2015 Oct 15. doi: 10.1038/ncomms9549

PMCID:: PMC4634137

Abstract Article PDF–5.5M

Select item 46184426.

Histone Demethylases KDM4A and KDM4C Regulate Differentiation of Embryonic Stem Cells to Endothelial Cells

Liangtang Wu, Kishore K. Wary, Sergei Revskoy, Xiaopei Gao, Kitman Tsang, Yulia A. Komarova, Jalees Rehman, Asrar B. Malik

Stem Cell Reports. 2015 Jul 14; 5(1): 10–21. Published online 2015 Jun 25. doi: 10.1016/j.stemcr.2015.05.016

PMCID:: PMC4618442

Abstract Article PDF–2.8M

Select item 44410507.

Hypoxia drives transient site-specific copy gain and drug-resistant gene expression

Joshua C. Black, Elnaz Atabakhsh, Jaegil Kim, Kelly M. Biette, Capucine Van Rechem, Brendon Ladd, Paul d. Burrowes, Carlos Donado, Hamid Mattoo, Benjamin P. Kleinstiver, Bing Song, Grasiella Andriani, J. Keith Joung, Othon Iliopoulos, Cristina Montagna, Shiv Pillai, Gad Getz, Johnathan R. Whetstine

Genes Dev. 2015 May 15; 29(10): 1018–1031. doi: 10.1101/gad.259796.115

PMCID:: PMC4441050

Abstract Article PDF–1.6M

Select item 43793988.

Integrative View of α2,3-Sialyltransferases (ST3Gal) Molecular and Functional Evolution in Deuterostomes: Significance of Lineage-Specific Losses

Daniel Petit, Elin Teppa, Anne-Marie Mir, Dorothée Vicogne, Christine Thisse, Bernard Thisse, Cyril Filloux, Anne Harduin-Lepers

Mol Biol Evol. 2015 Apr; 32(4): 906–927. Published online 2014 Dec 21. doi: 10.1093/molbev/msu395

PMCID:: PMC4379398

Abstract Article PDF–1.6M

Select item 31780599.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 13924110.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

Mammalian Gene Collection (MGC) Program Team

Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899

PMCID:: PMC139241

Abstract Article PDF–118K

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