PMC Links for GEO Profiles (Select 18625548) - PMC

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Items: 12

Select item 72970451.

A pan-plant protein complex map reveals deep conservation and novel assemblies

Claire D. McWhite, Ophelia Papoulas, Kevin Drew, Rachael M. Cox, Viviana June, Oliver Xiaoou Dong, Taejoon Kwon, Cuihong Wan, Mari L. Salmi, Stanley J. Roux, Jr., Karen S. Browning, Z. Jeffrey Chen, Pamela C. Ronald, Edward M. Marcotte

Cell. Author manuscript; available in PMC 2021 Apr 16.

Published in final edited form as: Cell. 2020 Apr 16; 181(2): 460–474.e14. Published online 2020 Mar 18. doi: 10.1016/j.cell.2020.02.049

PMCID:: PMC7297045

Abstract Article PDF–4.0M

Select item 66980592.

Reaction mechanisms of Pol IV, RDR2 and DCL3 drive RNA channeling in the siRNA-directed DNA methylation pathway

Jasleen Singh, Vibhor Mishra, Feng Wang, Hsiao-Yun Huang, Craig S. Pikaard

Mol Cell. Author manuscript; available in PMC 2020 Aug 8.

Published in final edited form as: Mol Cell. 2019 Aug 8; 75(3): 576–589.e5. doi: 10.1016/j.molcel.2019.07.008

PMCID:: PMC6698059

Abstract Article PDF–2.7M

Select item 43118293.

DOMAINS REARRANGED METHYLTRANSFERASE3 controls DNA methylation and regulates RNA polymerase V transcript abundance in Arabidopsis

Xuehua Zhong, Christopher J. Hale, Minh Nguyen, Israel Ausin, Martin Groth, Jonathan Hetzel, Ajay A. Vashisht, Ian R. Henderson, James A. Wohlschlegel, Steven E. Jacobsen

Proc Natl Acad Sci U S A. 2015 Jan 20; 112(3): 911–916. Published online 2015 Jan 5. doi: 10.1073/pnas.1423603112

PMCID:: PMC4311829

Abstract Article PDF–847K

Select item 36578154.

DTF1 is a core component of RNA-directed DNA methylation and may assist in the recruitment of Pol IV

Heng Zhang, Ze-Yang Ma, Liang Zeng, Kaori Tanaka, Cui-Jun Zhang, Jun Ma, Ge Bai, Pengcheng Wang, Su-Wei Zhang, Zhang-Wei Liu, Tao Cai, Kai Tang, Renyi Liu, Xiaobing Shi, Xin-Jian He, Jian-Kang Zhu

Proc Natl Acad Sci U S A. 2013 May 14; 110(20): 8290–8295. Published online 2013 May 1. doi: 10.1073/pnas.1300585110

PMCID:: PMC3657815

Abstract Article PDF–972K

Select item 32485625.

The RNA Silencing Enzyme RNA Polymerase V Is Required for Plant Immunity

Ana López, Vicente Ramírez, Javier García-Andrade, Victor Flors, Pablo Vera

PLoS Genet. 2011 Dec; 7(12): e1002434. Published online 2011 Dec 29. doi: 10.1371/journal.pgen.1002434

PMCID:: PMC3248562

Abstract Article PDF–750K

Select item 32043266.

DRD1-Pol V-dependent self-silencing of an exogenous silencer restricts non-cell-autonomous silencing of an endogenous target gene

Li Dong, Meng Liu, Yuan-Yuan Fang, Jian-Hua Zhao, Xiang-Feng He, Xiao-Bao Ying, Yi-Yue Zhang, Qi Xie, Nam-Hai Chua, Hui-Shan Guo

Plant J. Author manuscript; available in PMC 2012 Nov 1.

Published in final edited form as: Plant J. 2011 Nov; 68(4): 633–645. Published online 2011 Aug 30. doi: 10.1111/j.1365-313X.2011.04714.x

PMCID:: PMC3204326

Abstract Article PDF–1.8M

Select item 31410087.

SHH1, a Homeodomain Protein Required for DNA Methylation, As Well As RDR2, RDM4, and Chromatin Remodeling Factors, Associate with RNA Polymerase IV

Julie A. Law, Ajay A. Vashisht, James A. Wohlschlegel, Steven E. Jacobsen

PLoS Genet. 2011 Jul; 7(7): e1002195. Published online 2011 Jul 21. doi: 10.1371/journal.pgen.1002195

PMCID:: PMC3141008

Abstract Article PDF–1.4M

Select item 29727048.

A protein complex required for polymerase V transcripts and RNA-directed DNA methylation in plants

Julie A. Law, Israel Ausin, Lianna M. Johnson, Ajay A. Vashisht, Jian-Kang Zhu, James A. Wohlschlegel, Steven E. Jacobsen

Curr Biol. Author manuscript; available in PMC 2010 Nov 4.

Published in final edited form as: Curr Biol. 2010 May 25; 20(10): 951–956. Published online 2010 Apr 22. doi: 10.1016/j.cub.2010.03.062

PMCID:: PMC2972704

Abstract Article PDF–509K

Select item 29468239.

Subunit Compositions of the RNA-Silencing Enzymes PoI IV and PoI V Reveal Their Origins as Specialized Forms of RNA Polymerase II

Thomas S. Ream, Jeremy R. Haag, Andrzej T. Wierzbicki, Carrie D. Nicora, Angela Norbeck, Jian-Kang Zhu, Gretchen Hagen, Thomas J. Guilfoyle, Ljiljana Paša-Tolić, Craig S. Pikaard

Mol Cell. Author manuscript; available in PMC 2010 Sep 28.

Published in final edited form as: Mol Cell. 2009 Jan 30; 33(2): 192–203. Published online 2008 Dec 24. doi: 10.1016/j.molcel.2008.12.015

PMCID:: PMC2946823

Abstract Article PDF–7.0M

Select item 290289810.

RNA Polymerase V Functions in Arabidopsis Interphase Heterochromatin Organization Independently of the 24-nt siRNA-Directed DNA Methylation Pathway

Olga Pontes, Pedro Costa-Nunes, Paul Vithayathil, Craig S. Pikaard

Mol Plant. 2009 Jul; 2(4): 700–710. Published online 2009 Mar 24. doi: 10.1093/mp/ssp006

PMCID:: PMC2902898

Abstract Article PDF–953K

Select item 264854711.

NRPD4, a protein related to the RPB4 subunit of RNA polymerase II, is a component of RNA polymerases IV and V and is required for RNA-directed DNA methylation

Xin-Jian He, Yi-Feng Hsu, Olga Pontes, Jianhua Zhu, Jian Lu, Ray A. Bressan, Craig Pikaard, Co-Shine Wang, Jian-Kang Zhu

Genes Dev. 2009 Feb 1; 23(3): 318–330. doi: 10.1101/gad.1765209

PMCID:: PMC2648547

Abstract Article PDF–1.4M

Select item 119957312.

Reinforcement of silencing at transposons and highly repeated sequences requires the concerted action of two distinct RNA polymerases IV in Arabidopsis

Dominique Pontier, Galina Yahubyan, Danielle Vega, Agnès Bulski, Julio Saez-Vasquez, Mohamed-Ali Hakimi, Silva Lerbs-Mache, Vincent Colot, Thierry Lagrange

Genes Dev. 2005 Sep 1; 19(17): 2030–2040. doi: 10.1101/gad.348405