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Items: 1 to 20 of 25

1.
BraInMap elucidates the macromolecular connectivity landscape of mammalian brain
Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili
Cell Syst. Author manuscript; available in PMC 2021 Apr 22.
Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003
Correction in:
Cell Syst. 2020 Aug 26; 11(2): 208.
PMCID:
PMC7938770
AbstractArticlePDF–2.0M
2.
LncRNA PTPRE-AS1 modulates M2 macrophage activation and inflammatory diseases by epigenetic promotion of PTPRE
Xiao Han, Saihua Huang, Ping Xue, Jinrong Fu, Lijuan Liu, Caiyan Zhang, Lan Yang, Li Xia, Licheng Sun, Shau-Ku Huang, Yufeng Zhou
Sci Adv. 2019 Dec; 5(12): eaax9230. Published online 2019 Dec 11. doi: 10.1126/sciadv.aax9230
PMCID:
PMC6905863
AbstractArticlePDF–12M
3.
Maternal DNA Methylation Regulates Early Trophoblast Development
Miguel R. Branco, Michelle King, Vicente Perez-Garcia, Aaron B. Bogutz, Matthew Caley, Elena Fineberg, Louis Lefebvre, Simon J. Cook, Wendy Dean, Myriam Hemberger, Wolf Reik
Dev Cell. 2016 Jan 25; 36(2): 152–163. doi: 10.1016/j.devcel.2015.12.027
PMCID:
PMC4729543
AbstractArticlePDF–2.8M
4.
Adaptor Protein GRB2 Promotes Src Tyrosine Kinase Activation and Podosomal Organization by Protein-tyrosine Phosphatase ϵ in Osteoclasts
Einat Levy-Apter, Eynat Finkelshtein, Vidyasiri Vemulapalli, Shawn S.-C. Li, Mark T. Bedford, Ari Elson
J Biol Chem. 2014 Dec 26; 289(52): 36048–36058. Published online 2014 Nov 7. doi: 10.1074/jbc.M114.603548
PMCID:
PMC4276870
AbstractArticlePDF–1.8M
5.
Protein tyrosine phosphatases ε and α perform nonredundant roles in osteoclasts
Eynat Finkelshtein, Sutada Lotinun, Einat Levy-Apter, Esther Arman, Jeroen den Hertog, Roland Baron, Ari Elson
Mol Biol Cell. 2014 Jun 1; 25(11): 1808–1818. doi: 10.1091/mbc.E14-03-0788
PMCID:
PMC4038506
AbstractArticlePDF–1.9M
6.
Network Organization of the Huntingtin Proteomic Interactome in Mammalian Brain
Dyna I. Shirasaki, Erin R. Greiner, Ismael Al-Ramahi, Michelle Gray, Pinmanee Boontheung, Daniel H. Geschwind, Juan Botas, Giovanni Coppola, Steve Horvath, Joseph A. Loo, X. William Yang
Neuron. Author manuscript; available in PMC 2013 Jul 12.
Published in final edited form as: Neuron. 2012 Jul 12; 75(1): 41–57. doi: 10.1016/j.neuron.2012.05.024
PMCID:
PMC3432264
AbstractArticlePDF–4.9M
7.
Multifaceted Modulation of K+ Channels by Protein-tyrosine Phosphatase ϵ Tunes Neuronal Excitability
Sharon Ebner-Bennatan, Eti Patrich, Asher Peretz, Polina Kornilov, Zohar Tiran, Ari Elson, Bernard Attali
J Biol Chem. 2012 Aug 10; 287(33): 27614–27628. Published online 2012 Jun 21. doi: 10.1074/jbc.M112.342519
PMCID:
PMC3431696
AbstractArticlePDF–3.9M
8.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
9.
A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo
Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio
PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582
PMCID:
PMC3022534
AbstractArticlePDF–3.8M
10.
PTP-ε HAS A CRITICAL ROLE IN SIGNALING TRANSDUCTION PATHWAYS AND PHOSPHOPROTEIN NETWORK TOPOLOGY IN RED CELLS
Lucia De Franceschi, Andrea Biondani, Franco Carta, Franco Turrini, Carlo Laudanna, Renzo Deana, Anna Maria Brunati, Loris Turretta, Achille Iolascon, Silverio Perrotta, Ari Elson, Cristina Bulato, Carlo Brugnara
Proteomics. Author manuscript; available in PMC 2010 Dec 22.
Published in final edited form as: Proteomics. 2008 Nov; 8(22): 4695–4708. doi: 10.1002/pmic.200700596
PMCID:
PMC3008556
AbstractArticlePDF–861K
11.
Protein tyrosine phosphatases expression during development of mouse superior colliculus
Jacqueline Reinhard, Andrea Horvat-Bröcker, Sebastian Illes, Angelika Zaremba, Piotr Knyazev, Axel Ullrich, Andreas Faissner
Exp Brain Res. 2009 Dec; 199(3-4): 279–297. Published online 2009 Sep 1. doi: 10.1007/s00221-009-1963-6
PMCID:
PMC2845883
AbstractArticlePDF–1.1M
12.
Protein-tyrosine Phosphatase α Acts as an Upstream Regulator of Fyn Signaling to Promote Oligodendrocyte Differentiation and Myelination
Pei-Shan Wang, Jing Wang, Zhi-Cheng Xiao, Catherine J. Pallen
J Biol Chem. 2009 Nov 27; 284(48): 33692–33702. Published online 2009 Oct 6. doi: 10.1074/jbc.M109.061770
PMCID:
PMC2785211
AbstractArticlePDF–3.1M
13.
Elucidation of the transcription network governing mammalian sex determination by exploiting strain-specific susceptibility to sex reversal
Steven C. Munger, David L. Aylor, Haider Ali Syed, Paul M. Magwene, David W. Threadgill, Blanche Capel
Genes Dev. 2009 Nov 1; 23(21): 2521–2536. doi: 10.1101/gad.1835809
PMCID:
PMC2779749
AbstractArticlePDF–1.0M
14.
Protein Tyrosine Phosphatase Epsilon Regulates Integrin-mediated Podosome Stability in Osteoclasts by Activating Src
Shira Granot-Attas, Chen Luxenburg, Eynat Finkelshtein, Ari Elson
Mol Biol Cell. 2009 Oct 15; 20(20): 4324–4334. doi: 10.1091/mbc.E08-11-1158
PMCID:
PMC2762143
AbstractArticlePDF–1.6M
15.
Association of Tyrosine Phosphatase Epsilon with Microtubules Inhibits Phosphatase Activity and Is Regulated by the Epidermal Growth Factor Receptor
Tal Sines, Shira Granot-Attas, Sabrina Weisman-Welcher, Ari Elson
Mol Cell Biol. 2007 Oct; 27(20): 7102–7112. Published online 2007 Aug 20. doi: 10.1128/MCB.02096-06
PMCID:
PMC2168897
AbstractArticlePDF–586K
16.
Tyrosine Phosphatases ε and α Perform Specific and Overlapping Functions in Regulation of Voltage-gated Potassium Channels in Schwann Cells
Zohar Tiran, Asher Peretz, Tal Sines, Vera Shinder, Jan Sap, Bernard Attali, Ari Elson
Mol Biol Cell. 2006 Oct; 17(10): 4330–4342. doi: 10.1091/mbc.E06-02-0151
PMCID:
PMC1635364
AbstractArticlePDF–1.2M
17.
A novel receptor-type protein tyrosine phosphatase with a single catalytic domain is specifically expressed in mouse brain.
W Hendriks, J Schepens, C Brugman, P Zeeuwen, B Wieringa
Biochem J. 1995 Jan 15; 305(Pt 2): 499–504. doi: 10.1042/bj3050499
PMCID:
PMC1136390
SummaryPage BrowsePDF–1.5M
18.
RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer
Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki
Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600
PMCID:
PMC310992
AbstractArticlePDF–3.4M
19.
Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes
Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki
Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100
PMCID:
PMC310980
AbstractArticlePDF–1.4M
20.
Tyrosine Phosphatase Epsilon Is a Positive Regulator of Osteoclast Function in Vitro and In Vivo
Riccardo Chiusaroli, Hilla Knobler, Chen Luxenburg, Archana Sanjay, Shira Granot-Attas, Zohar Tiran, Tsuyoshi Miyazaki, Alon Harmelin, Roland Baron, Ari Elson
Mol Biol Cell. 2004 Jan; 15(1): 234–244. doi: 10.1091/mbc.E03-04-0207
PMCID:
PMC307543
AbstractArticlePDF–720K

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