PMC Links for GEO Profiles (Select 17931711) - PMC

Select item 70084861.

A PXY-Mediated Transcriptional Network Integrates Signaling Mechanisms to Control Vascular Development in Arabidopsis

Margot E. Smit, Shauni R. McGregor, Heng Sun, Catherine Gough, Anne-Maarit Bågman, Cara L. Soyars, Johannes T. Kroon, Allison Gaudinier, Clara J. Williams, Xiyan Yang, Zachary L. Nimchuk, Dolf Weijers, Simon R. Turner, Siobhán M. Brady, J. Peter Etchells

Plant Cell. 2020 Feb; 32(2): 319–335. Published online 2019 Dec 5. doi: 10.1105/tpc.19.00562

PMCID:: PMC7008486

Abstract Article PDF–3.0M

Select item 55642162.

CrY2H-seq: a massively-multiplexed assay for deep coverage interactome mapping

Shelly A. Wanamaker, Renee M. Garza, Andrew MacWilliams, Joseph R. Nery, Anna Bartlett, Rosa Castanon, Adeline Goubil, Joseph Feeney, Ronan O’Malley, Shao-shan Carol Huang, Zhuzhu Z. Zhang, Mary Galli, Joseph R. Ecker

Nat Methods. Author manuscript; available in PMC 2017 Dec 26.

Published in final edited form as: Nat Methods. 2017 Aug; 14(8): 819–825. Published online 2017 Jun 26. doi: 10.1038/nmeth.4343

Correction in:: Nat Methods. 2023 Jan 23

PMCID:: PMC5564216

Abstract Article PDF–1.3M

Select item 53493233.

Establishment of Expression in the SHORTROOT-SCARECROW Transcriptional Cascade through Opposing Activities of Both Activators and Repressors

Erin E. Sparks, Colleen Drapek, Allison Gaudinier, Song Li, Mitra Ansariola, Ning Shen, Jessica H. Hennacy, Jingyuan Zhang, Gina Turco, Jalean J. Petricka, Jessica Foret, Alexander J. Hartemink, Raluca Gordân, Molly Megraw, Siobhan M. Brady, Philip N. Benfey

Dev Cell. Author manuscript; available in PMC 2017 Dec 5.

Published in final edited form as: Dev Cell. 2016 Dec 5; 39(5): 585–596. Published online 2016 Oct 27. doi: 10.1016/j.devcel.2016.09.031

PMCID:: PMC5349323

Abstract Article PDF–2.4M

Select item 43337224.

An Arabidopsis Gene Regulatory Network for Secondary Cell Wall Synthesis

M Taylor-Teeples, L Lin, M de Lucas, G Turco, TW Toal, A Gaudinier, NF Young, GM Trabucco, MT Veling, R Lamothe, PP Handakumbura, G Xiong, C Wang, J Corwin, A Tsoukalas, L Zhang, D Ware, M Pauly, DJ Kliebenstein, K Dehesh, I Tagkopoulos, G Breton, JL Pruneda-Paz, SE Ahnert, SA Kay, SP Hazen, SM Brady

Nature. Author manuscript; available in PMC 2015 Jul 29.

Published in final edited form as: Nature. 2015 Jan 29; 517(7536): 571–575. Published online 2014 Dec 24. doi: 10.1038/nature14099

PMCID:: PMC4333722

Abstract Article PDF–3.2M

Select item 42568715.

Promoter-Based Integration in Plant Defense Regulation

Baohua Li, Allison Gaudinier, Michelle Tang, Mallorie Taylor-Teeples, Ngoc T. Nham, Cyrus Ghaffari, Darik Scott Benson, Margaret Steinmann, Jennifer A. Gray, Siobhan M. Brady, Daniel J. Kliebenstein

Plant Physiol. 2014 Dec; 166(4): 1803–1820. Published online 2014 Oct 28. doi: 10.1104/pp.114.248716

PMCID:: PMC4256871

Abstract Article PDF–1.7M

Select item 39917396.

The AtCathB3 gene, encoding a cathepsin B-like protease, is expressed during germination of Arabidopsis thaliana and transcriptionally repressed by the basic leucine zipper protein GBF1

Raquel Iglesias-Fernández, Dorothee Wozny, Maite Iriondo-de Hond, Luis Oñate-Sánchez, Pilar Carbonero, Cristina Barrero-Sicilia

J Exp Bot. 2014 May; 65(8): 2009–2021. Published online 2014 Mar 5. doi: 10.1093/jxb/eru055

PMCID:: PMC3991739

Abstract Article PDF–5.1M

Select item 38210747.

Enhanced Y1H assays for Arabidopsis

Allison Gaudinier, Lifang Zhang, John S. Reece-Hoyes, Mallorie Taylor-Teeples, Li Pu, Zhijie Liu, Ghislain Breton, Jose L. Pruneda-Paz, Dahae Kim, Steve A. Kay, Albertha J.M. Walhout, Doreen Ware, Siobhan M. Brady

Nat Methods. Author manuscript; available in PMC 2013 Nov 8.

Published in final edited form as: Nat Methods. 2011 Oct 30; 8(12): 10.1038/nmeth.1750. Published online 2011 Oct 30. doi: 10.1038/nmeth.1750

PMCID:: PMC3821074

Abstract Article PDF–616K

Select item 34316878.

Redox-mediated Mechanisms Regulate DNA Binding Activity of the G-group of Basic Region Leucine Zipper (bZIP) Transcription Factors in Arabidopsis

Jehad Shaikhali, Louise Norén, Juan de Dios Barajas-López, Vaibhav Srivastava, Janine König, Uwe H. Sauer, Gunnar Wingsle, Karl-Josef Dietz, Åsa Strand

J Biol Chem. 2012 Aug 10; 287(33): 27510–27525. Published online 2012 Jun 20. doi: 10.1074/jbc.M112.361394

PMCID:: PMC3431687

Abstract Article PDF–4.0M

Select item 34066839.

Molecular Interactions of GBF1 with HY5 and HYH Proteins during Light-mediated Seedling Development in Arabidopsis thaliana

Aparna Singh, Hathi Ram, Nazia Abbas, Sudip Chattopadhyay

J Biol Chem. 2012 Jul 27; 287(31): 25995–26009. Published online 2012 Jun 12. doi: 10.1074/jbc.M111.333906

PMCID:: PMC3406683

Abstract Article PDF–3.5M

Select item 55657410.

Heterodimerization between light-regulated and ubiquitously expressed Arabidopsis GBF bZIP proteins.

U Schindler, A E Menkens, H Beckmann, J R Ecker, A R Cashmore

EMBO J. 1992 Apr; 11(4): 1261–1273. doi: 10.1002/j.1460-2075.1992.tb05170.x

PMCID:: PMC556574

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