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Select item 112441581.

Drosophila Nhe2 overexpression induces autophagic cell death

Jobelle Peralta, Blake DuPriest, Daniel Orozco, Juan Reyna Pacheco, Laura Martins, Rachel Ann Soriano, Alan Wong, Ramy Wong, Bree Grillo-Hill

Mol Biol Cell. 2024 Jul 1; 35(7): br13. Published online 2024 Jul 1. doi: 10.1091/mbc.E24-02-0058

PMCID:: PMC11244158

Abstract Article PDF–2.1M

Select item 86644862.

Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes

Ana López-Varea, Patricia Vega-Cuesta, Ana Ruiz-Gómez, Cristina M Ostalé, Cristina Molnar, Covadonga F Hevia, Mercedes Martín, Maria F Organista, Jesus de Celis, Joaquín Culí, Nuria Esteban, Jose F de Celis

G3 (Bethesda) 2021 Dec; 11(12): jkab349. Published online 2021 Oct 2. doi: 10.1093/g3journal/jkab349

PMCID:: PMC8664486

Abstract Article PDF–3.1M

Select item 84879173.

Transporters and tubule crystals in the insect Malpighian tubule

Carmen J Reynolds, Daniel R Turin, Michael F Romero

Curr Opin Insect Sci. Author manuscript; available in PMC 2022 Oct 1.

Published in final edited form as: Curr Opin Insect Sci. 2021 Oct; 47: 82–89. Published online 2021 May 24. doi: 10.1016/j.cois.2021.05.003

PMCID:: PMC8487917

Abstract Article PDF–979K

Select item 80422704.

Comprehensive Identification and Alternative Splicing of Microexons in Drosophila

Ting-Lin Pang, Zhan Ding, Shao-Bo Liang, Liang Li, Bei Zhang, Yu Zhang, Yu-Jie Fan, Yong-Zhen Xu

Front Genet. 2021; 12: 642602. Published online 2021 Mar 30. doi: 10.3389/fgene.2021.642602

PMCID:: PMC8042270

Abstract Article PDF–3.6M

Select item 75814295.

Patient-specific genomics and cross-species functional analysis implicate LRP2 in hypoplastic left heart syndrome

Jeanne L Theis, Georg Vogler, Maria A Missinato, Xing Li, Tanja Nielsen, Xin-Xin I Zeng, Almudena Martinez-Fernandez, Stanley M Walls, Anaïs Kervadec, James N Kezos, Katja Birker, Jared M Evans, Megan M O'Byrne, Zachary C Fogarty, André Terzic, Paul Grossfeld, Karen Ocorr, Timothy J Nelson, Timothy M Olson, Alexandre R Colas, Rolf Bodmer

eLife. 2020; 9: e59554. Published online 2020 Oct 2. doi: 10.7554/eLife.59554

PMCID:: PMC7581429

Abstract Article PDF–3.4M

Select item 74868956.

Identification of the Wallenda JNKKK as an Alk suppressor reveals increased competitiveness of Alk-expressing cells

Georg Wolfstetter, Kathrin Pfeifer, Mattias Backman, Tafheem A. Masudi, Patricia Mendoza-García, Sa Chen, Hannah Sonnenberg, Sanjay K. Sukumar, Ezgi Uçkun, Gaurav K. Varshney, Anne Uv, Ruth H. Palmer

Sci Rep. 2020; 10: 14954. Published online 2020 Sep 11. doi: 10.1038/s41598-020-70890-6

PMCID:: PMC7486895

Abstract Article PDF–5.3M

Select item 68430497.

Targeted renal knockdown of Na⁺/H⁺ exchanger regulatory factor Sip1 produces uric acid nephrolithiasis in Drosophila

Saurav Ghimire, Selim Terhzaz, Pablo Cabrero, Michael F. Romero, Shireen A. Davies, Julian A. T. Dow

Am J Physiol Renal Physiol. 2019 Oct 1; 317(4): F930–F940. Published online 2019 Jul 31. doi: 10.1152/ajprenal.00551.2018

PMCID:: PMC6843049

Abstract Article

Select item 65927278.

Drosophila anion exchanger 2 is required for proper ovary development and oogenesis

Marimar Benitez, Sumitra Tatapudy, Yi Liu, Diane L. Barber, Todd Nystul

Dev Biol. Author manuscript; available in PMC 2020 Aug 15.

Published in final edited form as: Dev Biol. 2019 Aug 15; 452(2): 127–133. Published online 2019 May 7. doi: 10.1016/j.ydbio.2019.04.018

PMCID:: PMC6592727

Abstract Article PDF–1.2M

Select item 62197169.

β-Catenin is a pH sensor with decreased stability at higher intracellular pH

Katharine A. White, Bree K. Grillo-Hill, Mario Esquivel, Jobelle Peralta, Vivian N. Bui, Ismahan Chire, Diane L. Barber

J Cell Biol. 2018 Nov 5; 217(11): 3965–3976. doi: 10.1083/jcb.201712041

PMCID:: PMC6219716

Abstract Article PDF–2.1M

Select item 593683010.

Histone deacetylase–mediated regulation of endolysosomal pH

Hari Prasad, Rajini Rao

J Biol Chem. 2018 May 4; 293(18): 6721–6735. Published online 2018 Mar 22. doi: 10.1074/jbc.RA118.002025

PMCID:: PMC5936830

Abstract Article PDF–3.1M

Select item 589891211.

A gene-specific T2A-GAL4 library for Drosophila

Pei-Tseng Lee, Jonathan Zirin, Oguz Kanca, Wen-Wen Lin, Karen L Schulze, David Li-Kroeger, Rong Tao, Colby Devereaux, Yanhui Hu, Verena Chung, Ying Fang, Yuchun He, Hongling Pan, Ming Ge, Zhongyuan Zuo, Benjamin E Housden, Stephanie E Mohr, Shinya Yamamoto, Robert W Levis, Allan C Spradling, Norbert Perrimon, Hugo J Bellen

eLife. 2018; 7: e35574. Published online 2018 Mar 22. doi: 10.7554/eLife.35574

PMCID:: PMC5898912

Abstract Article PDF–4.9M

Select item 570780512.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 568900213.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 510029414.

Increased intracellular pH is necessary for adult epithelial and embryonic stem cell differentiation

Bryne Ulmschneider, Bree K. Grillo-Hill, Marimar Benitez, Dinara R. Azimova, Diane L. Barber, Todd G. Nystul

J Cell Biol. 2016 Nov 7; 215(3): 345–355. doi: 10.1083/jcb.201606042

PMCID:: PMC5100294

Abstract Article PDF–2.4M

Select item 489003015.

Molecular mechanism and functional significance of acid generation in the Drosophila midgut

Gayle Overend, Yuan Luo, Louise Henderson, Angela E. Douglas, Shireen A. Davies, Julian A. T. Dow

Sci Rep. 2016; 6: 27242. Published online 2016 Jun 2. doi: 10.1038/srep27242

PMCID:: PMC4890030

Abstract Article PDF–1.4M

Select item 482931716.

Genome-wide identification and characterization of tissue-specific RNA editing events in D. melanogaster and their potential role in regulating alternative splicing

Alborz Mazloomian, Irmtraud M Meyer

RNA Biol. 2015 Dec; 12(12): 1391–1401. Published online 2015 Oct 29. doi: 10.1080/15476286.2015.1107703

PMCID:: PMC4829317

Abstract Article PDF–609K

Select item 456859017.

Extensive identification and analysis of conserved small ORFs in animals

Sebastian D. Mackowiak, Henrik Zauber, Chris Bielow, Denise Thiel, Kamila Kutz, Lorenzo Calviello, Guido Mastrobuoni, Nikolaus Rajewsky, Stefan Kempa, Matthias Selbach, Benedikt Obermayer

Genome Biol. 2015; 16: 179. Published online 2015 Sep 14. doi: 10.1186/s13059-015-0742-x

PMCID:: PMC4568590

Abstract Article PDF–1.6M

Select item 452833018.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 452832919.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929